FFCP PHASE1:Hg19::chr3:113251107..113251113,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:113251107..113251113,- | |||
|description=CAGE_peak_at_chr3:113251107..113251113,- | |||
|id=chr3:113251107..113251113,- | |||
|ontology_enrichment_celltype=CL:0000542!4.65e-19!53;CL:0000051!4.65e-19!53;CL:0000838!1.31e-18!52;CL:0000037!7.54e-11!172;CL:0000566!7.54e-11!172;CL:0000738!3.38e-10!140;CL:0000945!3.75e-10!24;CL:0000826!3.75e-10!24;CL:0000988!2.93e-09!182;CL:0002087!2.42e-08!119;CL:0002032!3.32e-08!165;CL:0000837!3.32e-08!165;CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0002368!2.22e-07!13;CL:0002076!2.51e-07!43;CL:0002202!6.28e-07!9;CL:0002632!6.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.23e-18;24!CL:0000542;2.52e-16;53!CL:0000084;4.72e-11;25!CL:0000623;7.38e-08;3!CL:0000784;2.20e-07;3!CL:0000226;6.29e-07;3!CL:0000842;6.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.83e-33,52;CL:0000542,2.50e-32,53;CL:0000051,2.50e-32,53;CL:0000945,6.34e-19,24;CL:0000826,6.34e-19,24;CL:0000738,1.21e-17,136;CL:0002087,7.87e-17,115;CL:0000037,2.31e-16,168;CL:0000988,7.31e-15,177;CL:0002031,1.09e-13,120;CL:0002032,2.82e-11,161;CL:0000837,2.82e-11,161;CL:0000084,5.22e-11,25;CL:0000827,5.22e-11,25;CL:0000623,7.11e-08,3;CL:0000825,7.11e-08,3;CL:0000784,1.73e-07,3;CL:0000817,2.82e-07,3;CL:0000226,6.08e-07,3;CL:0000842,6.08e-07,3;CL:0000236,6.80e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-16;53 | |||
|ontology_enrichment_disease=DOID:14566!9.06e-09!239;DOID:162!1.06e-08!235;DOID:0060058!1.02e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.32e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.36e-12,10;DOID:2531,3.74e-07,51;DOID:0060083,3.74e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,2.52164238968239,3.28402357799783,2.59745578335141,0.393364276848904,0.383829398097213,2.32224184974114,5.51652734687356,0.6024118375565,7.39508020333575,0.154934401160603,1.42169232487422,4.40400659002271,3.87796785972314,1.60435557976113,3.47217393145363,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.850417199860174,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0.546138611262131,1.77901850772711,0,0.400395987036012,0,0,0,7.39976859842283,11.1575065980478,11.4681968437569,2.64342657158052,0,1.84368859342554,2.16380747125216,1.57204305099666,2.2616164889946,0,0.32592226663359,1.89379122293893,1.94826728407911,0.891283655081389,1.17842362989935,0.664601683750863,0,2.30564375506215,0.910415432919148,2.46656856905514,0.552700035571697,0.289803085735052,1.18629250529648,1.87278579662799,4.18142095219907,0.113309342697566,0.383220493601921,1.03088233644789,0.759059076058509,0,0,0.950452044448374,0,0,0,0.710331756132051,0,4.23374160771938,4.81392352410313,4.92402973201517,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,16.6943437013739,1.71598473234038,14.8583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482022059766964,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0,0,0,1.1240175325762,0.301586917234893,1.20364978706088,0,0,1.44331342025273,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,2.5971971583826,2.03443756959773,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28553435957927,7.48716888767323,6.253199670926,8.47064039446339,0,1.30139853857622,0,0,1.91381625495949,0,0,0.414415513436035,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0,0,0,1.6541442089831,7.11856862701436,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.769776901804097,2.68120910214315,7.62236894029258,0,0,0,0,0.459446800413919,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,2.45040215981032,0.557409525377156,3.31819189845823,1.35169502361987,2.55082036366116,0,0.191505370132367,0.211673582723883,0,0,1.14117339516596,0.47003968731907,0,0,0.1605880751037,0,0.851692475380653,4.46556948182494,0,0,0,0.390776190804081,0,0,0,0,0,1.30998378285754,0,0.121360521749513,0.334330152832435,0.568272293612826,0,0,0,0,0,0.111308705022906,1.81284261649436,0,0.996239941255349,0.276283915531148,0,0,6.15424027305347,0,0.808815160325942,0.358042349351218,0,0.887790650732402,4.7896618469388,0,0,0.371072392647405,0,0.520855522170466,0.874599999961957,0,15.475908966828,0.508507300585533,0,0,1.16641845353302,0.173624994933292,0,0,1.52581736317083,0,1.47773809476774,0,0.435753854075961,0.139423744278603,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0.75901493089674,0.317873157960757,1.05499032264014,0.489698424477443,0.565412285735763,0.649165919226273,0,0,0,0,0,0,0.067401132980677,0,0,1.82454789215666,0.391329237864179,1.21390189767046,0,0,0,0.63186579628488,1.20258735531594,0,0,0,0.627865836814451,0,0.569219092059585,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,2.32971271899477,0.397429223405979,0.126621591911757,0,0,0.213452994739353,0.39961921916426,0.576361668616424,0.114536596165916,0,3.02515075775114,0.124252535565433,0.707082103850386,0.271808412147228,0.313808538937,0.203996435272644,0,0,0.136905378891993,1.27746588066972,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8778796425512,0,0,0,0,0,0.674921674654501,14.702237136601,0.303747783290123,0,0,0.0524545881349981,1.37280437475228,0,0,0,0,0,0,0,0,0,2.21649806023215,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,0,0.414239055347196,1.9846640872478,0.395223263795889,1.21792598380896,3.19170628885091,0,0,0,0,0.157054096250234,0,0.488105059607853,0,0.573409195690071,0,0.18628920882415,0,0.37494122388632,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.782982875895635,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0.337884881306145,1.28120759293973,0,0,0.138258436151731,0.584580926518165,0,0.490696182767533,1.31043939538565,0.491545817507439,0,5.39965968808311,0.213383459388282,1.54993481694734,0,0.184105950251841,0,0.622077260032973,0,0,1.10086159299127,0.109209638192014,0.169732529954025,0.425149840203366,0.371807292777007,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0,0.41023272848151,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0.707818340086442,3.66857197043358,4.85207797831421,0,0,0,0,0,0,0,4.09429793775242,0.147856086217045,0.0675375846183947,0,0,0,0.546974809018219,0,0.992422356778588,0.351742488719241,5.62154681614219,0,0,0,0.227662191351298,0,18.0917360462573,0,0.0679697329768317,0.263091094251396,0.118193840883968,1.77970243027311,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0.946656005844523,0.596493833314104,0,2.7492824225286,0,0,0.111855431797792,0.098150233615243,0.731507549893617,0,0,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0,0,0.905777061400041,0,1.96703604453562,0,0,0,0.588925401344836,0,0,0,0.281951753939561,0,2.59847005404815,1.07132363163395,2.47026410200984,0,0.730336388246517,0,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0,1.42838658878244,0.0645889098360061,0.186224142887574,1.12131862580613,0,0,0,0,0.336760265072938,0.0717222053926763,0,0.976839223331694,0.213454691755431,0,1.3473780315988,0,0.122241444182866,0,0,0.201273793591026,1.9234109538194 | |||
|short_description=p@chr3:113251107..113251113,- | |||
}} |
Latest revision as of 14:26, 29 July 2015
Short description: | p@chr3:113251107..113251113, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:113251107..113251113, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.83e-33 | 52 |
lymphocyte | 2.50e-32 | 53 |
common lymphoid progenitor | 2.50e-32 | 53 |
lymphocyte of B lineage | 6.34e-19 | 24 |
pro-B cell | 6.34e-19 | 24 |
leukocyte | 1.21e-17 | 136 |
nongranular leukocyte | 7.87e-17 | 115 |
hematopoietic stem cell | 2.31e-16 | 168 |
hematopoietic cell | 7.31e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.09e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.82e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-11 | 161 |
T cell | 5.22e-11 | 25 |
pro-T cell | 5.22e-11 | 25 |
natural killer cell | 7.11e-08 | 3 |
pro-NK cell | 7.11e-08 | 3 |
plasmacytoid dendritic cell | 1.73e-07 | 3 |
precursor B cell | 2.82e-07 | 3 |
single nucleate cell | 6.08e-07 | 3 |
mononuclear cell | 6.08e-07 | 3 |
B cell | 6.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.36e-12 | 10 |
hematologic cancer | 3.74e-07 | 51 |
immune system cancer | 3.74e-07 | 51 |