FFCP PHASE1:Hg19::chr3:128578615..128578626,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:128578615..128578626,- | |||
|coexpression_cluster_id=C242 | |||
|description=CAGE_peak_at_chr3:128578615..128578626,- | |||
|id=chr3:128578615..128578626,- | |||
|ontology_enrichment_celltype=CL:0000763!2.01e-14!112;CL:0000049!2.01e-14!112;CL:0002032!3.38e-10!165;CL:0000837!3.38e-10!165;CL:0000037!1.48e-09!172;CL:0000566!1.48e-09!172;CL:0000988!1.00e-08!182;CL:0002194!2.98e-08!63;CL:0000576!2.98e-08!63;CL:0000040!2.98e-08!63;CL:0000559!2.98e-08!63;CL:0002009!6.37e-08!65;CL:0000766!1.48e-07!76;CL:0000839!3.51e-07!70;CL:0000557!4.79e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.93e-12;1!CL:0000819;2.93e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.93e-12,1;CL:0000785,9.44e-07,2;CL:0000955,9.44e-07,2;CL:0000818,9.44e-07,2;CL:0000954,9.44e-07,2;CL:0000816,9.44e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.32e-11;1!CL:0000954;9.43e-07;2 | |||
|ontology_enrichment_disease=DOID:8692!4.47e-18!31;DOID:2531!5.75e-14!51;DOID:0060083!5.75e-14!51;DOID:1240!7.98e-14!39;DOID:74!1.22e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.07e-25;31!DOID:1240;2.53e-19;39!DOID:2531;1.23e-13;51!DOID:0060083;1.23e-13;51!DOID:0060073;2.93e-12;1!DOID:8675;2.93e-12;1!DOID:2355;3.45e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.09e-26,31;DOID:2531,1.45e-23,51;DOID:0060083,1.45e-23,51;DOID:1240,9.04e-21,39;DOID:0060073,2.93e-12,1;DOID:8675,2.93e-12,1;DOID:2355,3.65e-12,1;DOID:0050686,5.02e-11,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.32e-11;1!UBERON:0002082;1.32e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.19e-11,1;UBERON:0002082,1.19e-11,1;UBERON:0010226,1.19e-11,1 | |||
|phase1_expression=0,2.14100523890983,1.26858963686374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.515151135268373,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,164.328968903898,4.54371697741767,2.50634477090067,0,6.26293492904428,1.00899853595524,0.425846237690326,0,2.76516687877612,3.80249383417107,1.83534055883099,3.90776190804081,0,0,0,0,0,2.24568648489864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,6.09647990873648,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,1.19760786519031,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79086378329934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966868319603658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,1.21245917149183,1.87574891109325,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:128578615..128578626,- | |||
}} |
Latest revision as of 15:35, 29 July 2015
Short description: | p@chr3:128578615..128578626, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:128578615..128578626, - |
Coexpression cluster: | C242_acute_Chondrocyte_myelodysplastic_granulocyte_biphenotypic_Fibroblast_stomach |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.93e-12 | 1 |
mature B cell | 9.44e-07 | 2 |
pre-B-II cell | 9.44e-07 | 2 |
transitional stage B cell | 9.44e-07 | 2 |
small pre-B-II cell | 9.44e-07 | 2 |
immature B cell | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.19e-11 | 1 |
cardiac ventricle | 1.19e-11 | 1 |
future cardiac ventricle | 1.19e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.09e-26 | 31 |
hematologic cancer | 1.45e-23 | 51 |
immune system cancer | 1.45e-23 | 51 |
leukemia | 9.04e-21 | 39 |
lymphatic system cancer | 2.93e-12 | 1 |
lymphosarcoma | 2.93e-12 | 1 |
anemia | 3.65e-12 | 1 |
organ system cancer | 5.02e-11 | 137 |