FFCP PHASE1:Hg19::chr3:149245738..149245764,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:149245738..149245764,- | |||
|description=CAGE_peak_at_chr3:149245738..149245764,- | |||
|id=chr3:149245738..149245764,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-08!180;CL:0000222!5.95e-08!119;CL:0000359!8.11e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.44e-08;24!CL:0002595;3.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.17e-08,24;CL:0000115,4.47e-07,36;CL:0002595,4.52e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.78e-15!286;UBERON:0002049!5.56e-15!79;UBERON:0007798!5.56e-15!79;UBERON:0004111!7.34e-14!241;UBERON:0003914!2.79e-13!118;UBERON:0000055!3.32e-13!69;UBERON:0001981!7.21e-12!60;UBERON:0007500!7.21e-12!60;UBERON:0004537!7.21e-12!60;UBERON:0006965!7.21e-12!60;UBERON:0004872!7.85e-12!84;UBERON:0000025!1.51e-11!194;UBERON:0001009!5.54e-11!113;UBERON:0001637!8.76e-11!42;UBERON:0003509!8.76e-11!42;UBERON:0004572!8.76e-11!42;UBERON:0004535!9.30e-11!110;UBERON:0004573!3.71e-10!33;UBERON:0004571!3.71e-10!33;UBERON:0000468!4.35e-09!659;UBERON:0000467!2.46e-08!625;UBERON:0000483!2.75e-08!309;UBERON:0000480!3.63e-08!626;UBERON:0000119!4.51e-08!312;UBERON:0000481!1.39e-07!347;UBERON:0003103!5.87e-07!69;UBERON:0000922!6.40e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.21e-09;33!UBERON:0004571;2.21e-09;33!UBERON:0001637;1.44e-08;42!UBERON:0003509;1.44e-08;42!UBERON:0004572;1.44e-08;42!UBERON:0000055;5.39e-08;65!UBERON:0000947;7.00e-08;21!UBERON:0010191;7.00e-08;21!UBERON:0003834;3.65e-07;5!UBERON:0001533;3.65e-07;5!UBERON:0003513;8.45e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.11e-15,68;UBERON:0004872,1.47e-14,83;UBERON:0002049,1.80e-13,78;UBERON:0007798,1.80e-13,78;UBERON:0007500,2.16e-13,59;UBERON:0001981,2.16e-13,59;UBERON:0004537,2.16e-13,59;UBERON:0006965,2.16e-13,59;UBERON:0001009,2.25e-13,112;UBERON:0004535,3.22e-13,109;UBERON:0003914,4.79e-12,117;UBERON:0001637,4.16e-10,42;UBERON:0003509,4.16e-10,42;UBERON:0004572,4.16e-10,42;UBERON:0004573,4.68e-10,33;UBERON:0004571,4.68e-10,33;UBERON:0000948,7.65e-08,24;UBERON:0005498,7.65e-08,24;UBERON:0004140,7.65e-08,24;UBERON:0009881,7.65e-08,24;UBERON:0004141,7.65e-08,24;UBERON:0003084,7.65e-08,24;UBERON:0007005,7.65e-08,24;UBERON:0004139,7.65e-08,24;UBERON:0004291,7.65e-08,24;UBERON:0000947,8.80e-08,21;UBERON:0010191,8.80e-08,21;UBERON:0007100,9.29e-08,27;UBERON:0000926,9.51e-08,315;UBERON:0004120,9.51e-08,315;UBERON:0006603,9.51e-08,315;UBERON:0004111,2.86e-07,240;UBERON:0003103,4.32e-07,68;UBERON:0003834,4.52e-07,5;UBERON:0001533,4.52e-07,5;UBERON:0003513,8.51e-07,7 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.281908808191942,3.00219895059391,2.23480547213644,0.872338524100369,2.53299878168311,0,2.35067065379855,0,0.697801167972428,0.655324116390517,0.527533956456907,0.247532705920093,0.331397375727916,2.6893005858071,2.41077811209591,2.19093027116212,3.41552959153355,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0.684372125364421,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.01392563272577,3.1811437882044,2.91980922181582,0.567208902984407,0.665188192387692,0.43917392846563,0.523916301990851,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,4.95212475492121,0,1.55050055501597,1.77883131343355,0.33472061276467,1.20848795132744,0,3.66093086322254,1.83831540172934,11.3419872703446,1.87529429396568,0.22452937262617,1.23872628531654,0,0.949265659568129,1.46561395144326,0,0,0.436094052142534,0,1.13967460498122,0.132409180813219,1.43418310374407,3.19201543978521,0.560677600142307,1.06748995729705,1.2333377420858,0.311211035399766,1.48181739276657,3.10577615915572,0.454072282934794,3.45705554687999,0,0,0,0.747243402759005,0.587172493218824,1.13311061057692,0.421352420106746,0,1.22834317311768,0.619954687054593,0,1.7308685049499,0.910161361938026,0,0.336672227908132,1.12606667884768,0,0,1.5324389789951,1.35214253015937,1.36118619792025,0,0.213557388818567,0.635795703478686,0,0.412210116953756,0.515281080091258,0,0,0.389748020644795,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.604512589365842,0,0,0,0,0.365921118388786,0,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.661763836394364,0.435758888184812,0.237270619111097,0.134831308160164,0.392442930250692,0,1.4763109092493,0,0,0,0,1.96565443335525,0,0,0.491953754172454,0.343135620597051,0.219500570817251,0,0.201057944823262,0.277765335475589,0,1.03993478527958,0,0.231860809950154,0.117408694235822,1.15493158208859,1.38895653772983,3.04406643575357,0,0,0.738651018262192,7.02012795417713,3.12125440806329,0,0.503946384596579,0,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0,0.698476837213859,0,0,3.4214489204541,0.514137463516618,0,0.285826432630578,0,0,0.7333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,1.58390374586686,0.602878754119172,0,0.99972991182057,2.43247561282381,1.00451418286425,0,0.239624855491583,1.14861935834114,0,1.01346914667305,1.84928690295345,0,0,0,0.215627574859517,0,1.77866236955724,1.30139853857622,1.54657762555539,0.167516265334349,3.82763250991898,0,0,0,0.613457458595699,2.00068208423871,0,1.24782516918484,2.49800584316026,0.946214490203608,0.702848489956279,0.300946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,1.30325421702124,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.64341568457443,1.48418066444991,2.92998418225046,2.48586415438378,0.821271560138091,3.11552657510173,0.813472649219715,0.241718899183244,0.40101294060657,0.0920809889358963,0.229628896329213,1.82091168006717,1.57349297951309,0,0.385076685522074,0,2.92278449306521,0.73886140225013,0,0.850468526382578,1.72732732881711,1.54227252690289,0.812839312631559,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0,0.512900250232778,0.984043937099117,0.325378394664303,1.13345112812495,0.732555718546747,0.082509499920588,0,0,0,0.676695028044854,0.616194468458578,0.614014698904518,0.275673144969061,0.214840489736547,1.0151168573996,0.0852266274161009,1.24644849905432,0.165284915360978,0.192190067365106,0.127612712494584,0,0.464845549297286,0,2.0911118104818,0.616067160352178,0.532306030317022,0.869932992075073,0.55597265731176,0.429374660225974,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0.318203247925937,0.78494864019923,0,0.54907405947211,0.353437207037059,0.404364963146632,4.75530963519025,0.842516912477962,0,2.19342140668156,1.05650146756755,0.272999822815972,0.989838023675989,2.26016233240486,1.65409603063837,3.3171948762061,1.31535265576129,0,0,0.202910376962704,0.6196469961995,0.845086807596724,0,0.392996164052485,0,0,1.05553817648832,1.31717957183961,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0.564862804660675,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0.111443384277478,0.2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| |||
|short_description=p@chr3:149245738..149245764,- | |||
}} |
Latest revision as of 16:53, 29 July 2015
Short description: | p@chr3:149245738..149245764, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:149245738..149245764, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.17e-08 | 24 |
endothelial cell | 4.47e-07 | 36 |
smooth muscle cell of the subclavian artery | 4.52e-07 | 5 |