FFCP PHASE1:Mm9::chr12:83718089..83718103,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50779|HGNC=|UniProt=Q9Z2H2|association_with_transcript=64bp_to_NM_015812,uc007oda.1_5end|description=CAGE_peak_2_at_Rgs6_5end|id=chr12:83718089..83718103,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.08e-11!122;UBERON:0000025!5.01e-11!114;UBERON:0007100!7.24e-10!18;UBERON:0000948!7.24e-10!18;UBERON:0005498!7.24e-10!18;UBERON:0004140!7.24e-10!18;UBERON:0009881!7.24e-10!18;UBERON:0004141!7.24e-10!18;UBERON:0003084!7.24e-10!18;UBERON:0007005!7.24e-10!18;UBERON:0004139!7.24e-10!18;UBERON:0004291!7.24e-10!18;UBERON:0000033!2.94e-08!63;UBERON:0001017!5.86e-08!73;UBERON:0005743!5.86e-08!73;UBERON:0000073!2.62e-07!75;UBERON:0001016!2.62e-07!75;UBERON:0004535!2.80e-07!23;UBERON:0001009!2.80e-07!23;UBERON:0002346!4.85e-07!71;UBERON:0003075!4.85e-07!71;UBERON:0007284!4.85e-07!71;UBERON:0002048!6.75e-07!14;UBERON:0000117!6.75e-07!14;UBERON:0000171!6.75e-07!14;UBERON:0000170!6.75e-07!14;UBERON:0005597!6.75e-07!14;UBERON:0000118!6.75e-07!14;UBERON:0000955!7.58e-07!50;UBERON:0006238!7.58e-07!50;UBERON:0004121!8.03e-07!102;UBERON:0000924!8.03e-07!102;UBERON:0006601!8.03e-07!102;UBERON:0003056!9.92e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.80e-24,18;UBERON:0000948,1.80e-24,18;UBERON:0005498,1.80e-24,18;UBERON:0004140,1.80e-24,18;UBERON:0009881,1.80e-24,18;UBERON:0004141,1.80e-24,18;UBERON:0003084,1.80e-24,18;UBERON:0007005,1.80e-24,18;UBERON:0004139,1.80e-24,18;UBERON:0004291,1.80e-24,18;UBERON:0004535,2.79e-18,23;UBERON:0001009,2.79e-18,23;UBERON:0010314,6.93e-16,92;UBERON:0004872,3.67e-13,33;UBERON:0004111,6.06e-11,122;UBERON:0000025,2.95e-10,114;UBERON:0003103,3.32e-09,43;UBERON:0000483,2.68e-07,174;UBERON:0000119,4.04e-07,176;UBERON:0003914,5.01e-07,47;UBERON:0001017,6.73e-07,73|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0.571301968807607,0,0.489963196859816,0,0,0,1.27687338085188,0.921639199537461,0.263772575460388,0.0914876436024097,1.04182674111352,2.23346399201105,0.56276261003168,0.763991238884051,0.883885756421003,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,1.64769703345305,0.457500602818626,1.25654352112864,0.869121600961382,0.767146371990992,1.24672826735736,1.62241263067758,0,0.124406970610093,0,1.47309299120532,0,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0,0,0,0,4.55676699578104,1.64168241986767,1.62055855314913,2.13070262026689,2.16440654922144,2.46827380619805,2.09280550275367,1.87791380979733,1.5179494507732,4.27855609775049,2.46251196118643,3.08061476274252,2.04679982395465,3.29325172936576,1.8788898626452,0,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,1.00534083520108,0,0.58489226135736,1.79763881730844,0,0.199141273254367,0,0,0,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,2.04925687338048,0.8858587585951,3.18909537314974,0.81931657357869,1.03610989119537,0.867894351489069,0,0,0,0,1.76605648986571,1.40654023910644,0,0,2.2085575359138,0.390438744296638,1.29254038639679,0,0,0,1.21443210502468,1.75353514746787,1.97643888973262,1.28528526568723,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0,0,0.661585194164886,0.16488625294148,0.645857706783622,0.603129249281559,0.119372344003136,0.164140899745061,0,1.29797711407357,0,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.695305955669133,0.578727661391115,0,0.588795680537589,0.685738504770831,0,0.238436189947321,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.118635018124174,0.492522411877817,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p2@Rgs6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50779 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z2H2 | |||
|association_with_transcript=64bp_to_NM_015812,uc007oda.1_5end | |||
|cluster_id=chr12:83718089..83718103,+ | |||
|description=CAGE_peak_2_at_Rgs6_5end | |||
|id=chr12:83718089..83718103,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.08e-11!122;UBERON:0000025!5.01e-11!114;UBERON:0007100!7.24e-10!18;UBERON:0000948!7.24e-10!18;UBERON:0005498!7.24e-10!18;UBERON:0004140!7.24e-10!18;UBERON:0009881!7.24e-10!18;UBERON:0004141!7.24e-10!18;UBERON:0003084!7.24e-10!18;UBERON:0007005!7.24e-10!18;UBERON:0004139!7.24e-10!18;UBERON:0004291!7.24e-10!18;UBERON:0000033!2.94e-08!63;UBERON:0001017!5.86e-08!73;UBERON:0005743!5.86e-08!73;UBERON:0000073!2.62e-07!75;UBERON:0001016!2.62e-07!75;UBERON:0004535!2.80e-07!23;UBERON:0001009!2.80e-07!23;UBERON:0002346!4.85e-07!71;UBERON:0003075!4.85e-07!71;UBERON:0007284!4.85e-07!71;UBERON:0002048!6.75e-07!14;UBERON:0000117!6.75e-07!14;UBERON:0000171!6.75e-07!14;UBERON:0000170!6.75e-07!14;UBERON:0005597!6.75e-07!14;UBERON:0000118!6.75e-07!14;UBERON:0000955!7.58e-07!50;UBERON:0006238!7.58e-07!50;UBERON:0004121!8.03e-07!102;UBERON:0000924!8.03e-07!102;UBERON:0006601!8.03e-07!102;UBERON:0003056!9.92e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.80e-24,18;UBERON:0000948,1.80e-24,18;UBERON:0005498,1.80e-24,18;UBERON:0004140,1.80e-24,18;UBERON:0009881,1.80e-24,18;UBERON:0004141,1.80e-24,18;UBERON:0003084,1.80e-24,18;UBERON:0007005,1.80e-24,18;UBERON:0004139,1.80e-24,18;UBERON:0004291,1.80e-24,18;UBERON:0004535,2.79e-18,23;UBERON:0001009,2.79e-18,23;UBERON:0010314,6.93e-16,92;UBERON:0004872,3.67e-13,33;UBERON:0004111,6.06e-11,122;UBERON:0000025,2.95e-10,114;UBERON:0003103,3.32e-09,43;UBERON:0000483,2.68e-07,174;UBERON:0000119,4.04e-07,176;UBERON:0003914,5.01e-07,47;UBERON:0001017,6.73e-07,73 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0.571301968807607,0,0.489963196859816,0,0,0,1.27687338085188,0.921639199537461,0.263772575460388,0.0914876436024097,1.04182674111352,2.23346399201105,0.56276261003168,0.763991238884051,0.883885756421003,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,1.64769703345305,0.457500602818626,1.25654352112864,0.869121600961382,0.767146371990992,1.24672826735736,1.62241263067758,0,0.124406970610093,0,1.47309299120532,0,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0,0,0,0,4.55676699578104,1.64168241986767,1.62055855314913,2.13070262026689,2.16440654922144,2.46827380619805,2.09280550275367,1.87791380979733,1.5179494507732,4.27855609775049,2.46251196118643,3.08061476274252,2.04679982395465,3.29325172936576,1.8788898626452,0,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,1.00534083520108,0,0.58489226135736,1.79763881730844,0,0.199141273254367,0,0,0,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,2.04925687338048,0.8858587585951,3.18909537314974,0.81931657357869,1.03610989119537,0.867894351489069,0,0,0,0,1.76605648986571,1.40654023910644,0,0,2.2085575359138,0.390438744296638,1.29254038639679,0,0,0,1.21443210502468,1.75353514746787,1.97643888973262,1.28528526568723,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0,0,0.661585194164886,0.16488625294148,0.645857706783622,0.603129249281559,0.119372344003136,0.164140899745061,0,1.29797711407357,0,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.695305955669133,0.578727661391115,0,0.588795680537589,0.685738504770831,0,0.238436189947321,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.118635018124174,0.492522411877817,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p2@Rgs6 | |||
}} |
Latest revision as of 21:39, 26 September 2015
Short description: | p2@Rgs6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgs6_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_NM_015812, uc007oda.1_5end |
EntrezGene: | Rgs6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.80e-24 | 18 |
heart | 1.80e-24 | 18 |
primitive heart tube | 1.80e-24 | 18 |
primary heart field | 1.80e-24 | 18 |
anterior lateral plate mesoderm | 1.80e-24 | 18 |
heart tube | 1.80e-24 | 18 |
heart primordium | 1.80e-24 | 18 |
cardiac mesoderm | 1.80e-24 | 18 |
cardiogenic plate | 1.80e-24 | 18 |
heart rudiment | 1.80e-24 | 18 |
cardiovascular system | 2.79e-18 | 23 |
circulatory system | 2.79e-18 | 23 |
structure with developmental contribution from neural crest | 6.93e-16 | 92 |
splanchnic layer of lateral plate mesoderm | 3.67e-13 | 33 |
anatomical conduit | 6.06e-11 | 122 |
tube | 2.95e-10 | 114 |
compound organ | 3.32e-09 | 43 |
epithelium | 2.68e-07 | 174 |
cell layer | 4.04e-07 | 176 |
epithelial tube | 5.01e-07 | 47 |
central nervous system | 6.73e-07 | 73 |