FFCP PHASE1:Mm9::chr13:69750946..69750961,+: Difference between revisions
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{{FFCP|EntrezGene=28114|HGNC=|MCL_coexpression_id=101|UniProt=Q1HFZ0|association_with_transcript=51bp_to_ENSMUST00000109699,NM_145354,uc007rcm.2_5end|description=CAGE_peak_2_at_Nsun2_5end|id=chr13:69750946..69750961,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!5.68e-11!51;UBERON:0004177!6.11e-09!29;UBERON:0002405!1.31e-07!70;UBERON:0002370!1.81e-07!23;UBERON:0000974!1.81e-07!23;UBERON:0004807!1.81e-07!23;UBERON:0005058!1.81e-07!23;UBERON:0003351!1.81e-07!23;UBERON:0009113!1.81e-07!23;UBERON:0003295!1.81e-07!23;UBERON:0009722!1.81e-07!23;UBERON:0005562!1.81e-07!23;UBERON:0007690!1.81e-07!23;UBERON:0000072!3.50e-07!27;UBERON:0003929!3.83e-07!55;UBERON:0006562!6.82e-07!24;UBERON:0001557!6.82e-07!24;UBERON:0001042!6.82e-07!24;UBERON:0008814!6.82e-07!24;UBERON:0009145!6.82e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.79e-09,29;UBERON:0005057,4.79e-09,29;UBERON:0000077,2.22e-08,35;UBERON:0002370,1.44e-07,23;UBERON:0000974,1.44e-07,23;UBERON:0004807,1.44e-07,23;UBERON:0005058,1.44e-07,23;UBERON:0003351,1.44e-07,23;UBERON:0009113,1.44e-07,23;UBERON:0003295,1.44e-07,23;UBERON:0009722,1.44e-07,23;UBERON:0005562,1.44e-07,23;UBERON:0007690,1.44e-07,23;UBERON:0003929,2.51e-07,55;UBERON:0000072,2.83e-07,27;UBERON:0006562,5.50e-07,24;UBERON:0001557,5.50e-07,24;UBERON:0001042,5.50e-07,24;UBERON:0008814,5.50e-07,24;UBERON:0009145,5.50e-07,24;UBERON:0003408,8.17e-07,24|phase1_expression=1.28119077683835,0.348975407639361,0,0.30246421130683,0,1.84667199103079,4.43864017131499,2.58246646883153,38.435321147405,36.280001579909,36.9830811367091,29.2763823512885,3.0816131387617,2.53519167015092,8.32774404539157,7.08663435864391,9.09430441566591,2.36596624018678,2.60517423850904,2.12194825899015,2.89147186513637,6.35462087685666,9.92559198727954,2.23989391910769,0.91763712426868,1.14846392823004,2.15380998079537,4.52489588640367,0.760093677825496,1.51218077855958,3.10422714917427,11.4305521222734,15.9916844771988,0,6.35473563452804,4.82080471539628,7.35009682544529,0,0,0,0,0,0,0.881277725829041,1.62203089951223,2.75320128242522,0,0.218025156380447,0.659058548203415,1.36100929351998,1.53985063787899,0,3.6912173332702,3.62681071005672,5.04140698713696,2.05807548828758,0.286533439938757,0.515672092277442,3.43937983461316,2.11596391708813,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,0,0,1.55534418462716,1.62007125998029,1.26194976810829,1.42825492201902,1.98781686856452,2.20483438586917,2.58782771749238,1.83843757322004,1.10115880999389,2.93680877595932,2.61131106535614,1.31886287730194,2.37867873366265,3.12548022334056,2.51264699101243,0.56276261003168,2.90316670775939,4.41942878210502,4.27115042397309,4.65998614563251,8.63278603998298,5.13886608726142,1.44932244350839,3.44169550792555,14.9593693415705,3.77792234146472,4.54843492213368,3.13618820968135,2.80888840263504,2.04516387093669,1.81850203222008,1.41335829804136,2.53518155598025,0,10.1922095882658,14.2213340630666,4.76280290224671,3.80039798212648,3.0331466700887,2.2836775943812,3.6251303710604,0.890652834388949,3.64319186208885,1.82679286987285,2.07553947530453,1.65794904607885,2.82212897125692,0.879666139307728,1.73036477414062,0.289198713839823,5.30766331169925,4.20593809863264,4.19598885074748,2.42437626567611,0,0.292780797011547,0.628340120440365,1.78819938646014,8.14742846640258,11.9980546198682,10.5468288470644,3.14560342750128,1.37250180845588,5.27748278874031,3.99795936442236,5.37002460393694,3.32460871295296,3.56930778749067,3.46253837091075,2.61254638281195,3.53811861807145,0.631325567659422,3.77349284591841,3.90833577536904,2.52086981727489,2.10986744970001,2.51735046859913,2.17793324484245,2.62364828767241,0.258703370739016,4.95806383745537,4.72765200419548,2.81521798662318,5.04150184583422,4.17070873838397,4.87553033131033,4.32142486456681,3.58261680273288,18.9597560574573,18.7863972193742,14.4923384691752,2.69263504296152,1.87620847984877,2.34080679899319,2.60419209143731,1.57411385397923,1.07986979021165,1.39520366850245,1.87791380979733,1.16765342367169,0.987359099480883,0.985004784474571,0.648550476366846,0,0.658650345873152,0.402619256281115,3.78521907415429,4.01327988279209,1.32167513193519,3.43785736662608,2.34617075588757,2.55460339046482,3.47942145569652,1.4117846723634,1.77902435075896,0.190225626112559,4.2707615539006,1.97638745668813,0.754005626400808,2.78539060857611,1.36474860983384,2.69645822596266,1.94524244887225,0.597423819763102,2.65535061334314,3.19895835307241,3.38123207019241,4.07302655690629,3.10323979468201,2.66516115583211,1.64414996523069,0.885660887877613,0.627994911365499,1.35736880313981,3.26097889795864,7.67487486294033,8.45203678986773,8.31989815823959,5.47722327748958,8.44120059133459,5.60176873919124,3.74004978686054,6.64754429777645,3.0201755450689,4.31304619582064,0.744281895337007,3.74445207737473,0,2.33216637578486,4.3419916922703,0.923765950833023,6.82169082373745,4.88894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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=28114 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q1HFZ0 | |||
|association_with_transcript=51bp_to_ENSMUST00000109699,NM_145354,uc007rcm.2_5end | |||
|cluster_id=chr13:69750946..69750961,+ | |||
|description=CAGE_peak_2_at_Nsun2_5end | |||
|id=chr13:69750946..69750961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!5.68e-11!51;UBERON:0004177!6.11e-09!29;UBERON:0002405!1.31e-07!70;UBERON:0002370!1.81e-07!23;UBERON:0000974!1.81e-07!23;UBERON:0004807!1.81e-07!23;UBERON:0005058!1.81e-07!23;UBERON:0003351!1.81e-07!23;UBERON:0009113!1.81e-07!23;UBERON:0003295!1.81e-07!23;UBERON:0009722!1.81e-07!23;UBERON:0005562!1.81e-07!23;UBERON:0007690!1.81e-07!23;UBERON:0000072!3.50e-07!27;UBERON:0003929!3.83e-07!55;UBERON:0006562!6.82e-07!24;UBERON:0001557!6.82e-07!24;UBERON:0001042!6.82e-07!24;UBERON:0008814!6.82e-07!24;UBERON:0009145!6.82e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.79e-09,29;UBERON:0005057,4.79e-09,29;UBERON:0000077,2.22e-08,35;UBERON:0002370,1.44e-07,23;UBERON:0000974,1.44e-07,23;UBERON:0004807,1.44e-07,23;UBERON:0005058,1.44e-07,23;UBERON:0003351,1.44e-07,23;UBERON:0009113,1.44e-07,23;UBERON:0003295,1.44e-07,23;UBERON:0009722,1.44e-07,23;UBERON:0005562,1.44e-07,23;UBERON:0007690,1.44e-07,23;UBERON:0003929,2.51e-07,55;UBERON:0000072,2.83e-07,27;UBERON:0006562,5.50e-07,24;UBERON:0001557,5.50e-07,24;UBERON:0001042,5.50e-07,24;UBERON:0008814,5.50e-07,24;UBERON:0009145,5.50e-07,24;UBERON:0003408,8.17e-07,24 | |||
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| |||
|short_description=p2@Nsun2 | |||
}} |
Latest revision as of 21:53, 1 October 2015
Short description: | p2@Nsun2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nsun2_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 51bp_to_ENSMUST00000109699, NM_145354, uc007rcm.2_5end |
EntrezGene: | Nsun2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.79e-09 | 29 |
immune organ | 4.79e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 2.22e-08 | 35 |
thymus | 1.44e-07 | 23 |
neck | 1.44e-07 | 23 |
respiratory system epithelium | 1.44e-07 | 23 |
hemolymphoid system gland | 1.44e-07 | 23 |
pharyngeal epithelium | 1.44e-07 | 23 |
thymic region | 1.44e-07 | 23 |
pharyngeal gland | 1.44e-07 | 23 |
entire pharyngeal arch endoderm | 1.44e-07 | 23 |
thymus primordium | 1.44e-07 | 23 |
early pharyngeal endoderm | 1.44e-07 | 23 |
gut epithelium | 2.51e-07 | 55 |
segment of respiratory tract | 2.83e-07 | 27 |
pharynx | 5.50e-07 | 24 |
upper respiratory tract | 5.50e-07 | 24 |
chordate pharynx | 5.50e-07 | 24 |
pharyngeal arch system | 5.50e-07 | 24 |
pharyngeal region of foregut | 5.50e-07 | 24 |
gland of gut | 8.17e-07 | 24 |