FFCP PHASE1:Mm9::chr14:102239671..102239682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380928|HGNC=|MCL_coexpression_id=2089|UniProt=Q3UPW3|association_with_transcript=-41bp_to_ENSMUST00000159026,ENSMUST00000162091,uc007uvz.1_5end|description=CAGE_peak_18_at_Lmo7_5end|id=chr14:102239671..102239682,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.75e-07!17;UBERON:0005181!6.75e-07!17;UBERON:0002224!6.75e-07!17;UBERON:0000915!6.75e-07!17;UBERON:0008947!6.75e-07!17;UBERON:0003258!6.75e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.32e-20,17;UBERON:0005181,2.32e-20,17;UBERON:0002224,2.32e-20,17;UBERON:0000915,2.32e-20,17;UBERON:0008947,2.32e-20,17;UBERON:0003258,2.32e-20,17;UBERON:0002048,4.45e-17,14;UBERON:0000117,4.45e-17,14;UBERON:0000171,4.45e-17,14;UBERON:0000170,4.45e-17,14;UBERON:0005597,4.45e-17,14;UBERON:0000118,4.45e-17,14;UBERON:0005153,8.87e-14,17;UBERON:0005157,1.81e-11,20;UBERON:0000065,9.69e-09,41;UBERON:0001004,1.78e-08,42|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,2.02209778005913,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,0,0,0.808834249737046,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.502617408451458,0.173824320192276,0.767146371990992,0,0,0.916554274652847,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0,0.556094498451196,1.74126083261083,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.787056926989615,0.462801338662135,0.232533944750408,1.07309360559848,0.934122738937356,0.493679549740441,1.31333971263276,0.729619285912702,0.146199987425332,0.658650345873152,0.536825675041487,0.630869845692382,1.13195073617213,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.189709611372772,0.295220295959204,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,5.54259570499814,0,0,0,0,1.50755631697634,2.61848004974615,4.09780660501378,1.26108115284953,1.10732344824387,0.797273843287435,2.62181303545181,2.76295970985433,2.60368305446721,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.534196811001766,1.46598263418218,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,1.36175842301515,0.18006109403131,0.388076051348264,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0.63549621259146,0.220528398054962,0.8244312647074,0.807322133479528,1.08563264870681,0.358117032009409,0.656563598980245,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.756037385752609,0.209088296014469,0.436725127492355,0.539457385539283,0.661227645802687,0.26175594198403,0.129614973291793,0,2.25477175473676,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0,0,0,0.25984164595559,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,0,0,0,0,0.375364950902364,0.36630324853453,2.14368379079066,2.50786052017682,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0.906284817968409,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,1.55572709461131,0.824140228955577,0.64183841918363,0.758091635291392,0,0.565879024158229,1.21733959710847,0.832326981263301,0.574354689556133,1.42888107384922,0.231768651889711,0.964546102318525,0.412085900803307,0.883193520806384,0.685738504770831,0.532427418478012,0,0.436039249896986,0.846984423737976,1.26921911837515,0.914639864363863,0.789209134313529,0.814824683075171,0,0.711810108745045,0.394017929502254,1.22769312950907,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.429742108096597,0.765153328275374,0.882365676478062,1.62307484934295|short_description=p18@Lmo7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380928 | |||
|HGNC= | |||
|MCL_coexpression_id=2089 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UPW3 | |||
|association_with_transcript=-41bp_to_ENSMUST00000159026,ENSMUST00000162091,uc007uvz.1_5end | |||
|cluster_id=chr14:102239671..102239682,+ | |||
|description=CAGE_peak_18_at_Lmo7_5end | |||
|id=chr14:102239671..102239682,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.75e-07!17;UBERON:0005181!6.75e-07!17;UBERON:0002224!6.75e-07!17;UBERON:0000915!6.75e-07!17;UBERON:0008947!6.75e-07!17;UBERON:0003258!6.75e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.32e-20,17;UBERON:0005181,2.32e-20,17;UBERON:0002224,2.32e-20,17;UBERON:0000915,2.32e-20,17;UBERON:0008947,2.32e-20,17;UBERON:0003258,2.32e-20,17;UBERON:0002048,4.45e-17,14;UBERON:0000117,4.45e-17,14;UBERON:0000171,4.45e-17,14;UBERON:0000170,4.45e-17,14;UBERON:0005597,4.45e-17,14;UBERON:0000118,4.45e-17,14;UBERON:0005153,8.87e-14,17;UBERON:0005157,1.81e-11,20;UBERON:0000065,9.69e-09,41;UBERON:0001004,1.78e-08,42 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,2.02209778005913,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,0,0,0.808834249737046,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.502617408451458,0.173824320192276,0.767146371990992,0,0,0.916554274652847,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0,0.556094498451196,1.74126083261083,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.787056926989615,0.462801338662135,0.232533944750408,1.07309360559848,0.934122738937356,0.493679549740441,1.31333971263276,0.729619285912702,0.146199987425332,0.658650345873152,0.536825675041487,0.630869845692382,1.13195073617213,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.189709611372772,0.295220295959204,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,5.54259570499814,0,0,0,0,1.50755631697634,2.61848004974615,4.09780660501378,1.26108115284953,1.10732344824387,0.797273843287435,2.62181303545181,2.76295970985433,2.60368305446721,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.534196811001766,1.46598263418218,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,1.36175842301515,0.18006109403131,0.388076051348264,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0.63549621259146,0.220528398054962,0.8244312647074,0.807322133479528,1.08563264870681,0.358117032009409,0.656563598980245,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.756037385752609,0.209088296014469,0.436725127492355,0.539457385539283,0.661227645802687,0.26175594198403,0.129614973291793,0,2.25477175473676,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0,0,0,0.25984164595559,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,0,0,0,0,0.375364950902364,0.36630324853453,2.14368379079066,2.50786052017682,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0.906284817968409,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,1.55572709461131,0.824140228955577,0.64183841918363,0.758091635291392,0,0.565879024158229,1.21733959710847,0.832326981263301,0.574354689556133,1.42888107384922,0.231768651889711,0.964546102318525,0.412085900803307,0.883193520806384,0.685738504770831,0.532427418478012,0,0.436039249896986,0.846984423737976,1.26921911837515,0.914639864363863,0.789209134313529,0.814824683075171,0,0.711810108745045,0.394017929502254,1.22769312950907,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.429742108096597,0.765153328275374,0.882365676478062,1.62307484934295 | |||
|short_description=p18@Lmo7 | |||
}} |
Latest revision as of 14:53, 25 September 2015
Short description: | p18@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2089 |
Association with transcript: | -41bp_to_ENSMUST00000159026, ENSMUST00000162091, uc007uvz.1_5end |
EntrezGene: | Lmo7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.32e-20 | 17 |
thoracic segment organ | 2.32e-20 | 17 |
thoracic cavity | 2.32e-20 | 17 |
thoracic segment of trunk | 2.32e-20 | 17 |
respiratory primordium | 2.32e-20 | 17 |
endoderm of foregut | 2.32e-20 | 17 |
lung | 4.45e-17 | 14 |
respiratory tube | 4.45e-17 | 14 |
respiration organ | 4.45e-17 | 14 |
pair of lungs | 4.45e-17 | 14 |
lung primordium | 4.45e-17 | 14 |
lung bud | 4.45e-17 | 14 |
epithelial bud | 8.87e-14 | 17 |
epithelial fold | 1.81e-11 | 20 |
respiratory tract | 9.69e-09 | 41 |
respiratory system | 1.78e-08 | 42 |