FFCP PHASE1:Hg19::chr4:178148315..178148320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:178148315..178148320,- | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr4:178148315..178148320,- | |||
|id=chr4:178148315..178148320,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.08e-19;1!CL:0000911;1.08e-19;1!CL:0000814;1.08e-19;1!CL:0000511;2.97e-19;1!CL:0002625;2.97e-19;1!CL:0002581;2.97e-19;1!CL:0000216;2.97e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.08e-19,1;CL:0000914,1.08e-19,1;CL:0000911,1.08e-19,1;CL:0000814,1.08e-19,1;CL:0002042,1.08e-19,1;CL:0002039,1.08e-19,1;CL:0002040,1.08e-19,1;CL:0002041,1.08e-19,1;CL:0000511,2.25e-19,1;CL:0002625,2.25e-19,1;CL:0000216,2.25e-19,1;CL:0002581,3.25e-19,1;CL:0000893,1.57e-10,2;CL:0002489,1.57e-10,2;CL:0000809,1.57e-10,2;CL:0000808,1.57e-10,2;CL:0000894,1.57e-10,2;CL:0000806,1.57e-10,2;CL:0000807,1.57e-10,2;CL:0000805,1.57e-10,2;CL:0002425,1.57e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.57e-10;2 | |||
|ontology_enrichment_disease=DOID:1036!1.54e-10!8;DOID:162!9.16e-10!235;DOID:14566!2.23e-09!239;DOID:1749!2.32e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.32e-21;8!DOID:1240;3.97e-10;39!DOID:2531;2.67e-08;51!DOID:0060083;2.67e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.20e-21,8;DOID:1240,8.12e-12,39;DOID:2531,4.76e-09,51;DOID:0060083,4.76e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.97e-19;1!UBERON:0001343;2.97e-19;1!UBERON:0004910;2.97e-19;1!UBERON:0004813;2.97e-19;1!UBERON:0004909;2.60e-10;2!UBERON:0005406;2.60e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.25e-19,1;UBERON:0001343,2.25e-19,1;UBERON:0004910,2.25e-19,1;UBERON:0005154,2.25e-19,1;UBERON:0005295,2.25e-19,1;UBERON:0004813,2.25e-19,1;UBERON:0005297,2.25e-19,1;UBERON:0005294,2.25e-19,1;UBERON:0010141,2.25e-19,1;UBERON:0005891,2.25e-19,1;UBERON:0004909,2.27e-10,2;UBERON:0005406,2.72e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640456598628376,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.132409180813219,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,195.700661412699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,241.386370345018,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15833924864053,1.9606253431774,1.67821586975843,0.948768663620925,0.158936578980379,0,0.163232808159148,0,0,0,0,0,1.48260564340311,0.247127877893006,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,1.50323419414493,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0.19351266257817,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,1.18812770967818,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0.250707539292375,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr4:178148315..178148320,- | |||
}} |
Latest revision as of 03:41, 30 July 2015
Short description: | p@chr4:178148315..178148320, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:178148315..178148320, - |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.08e-19 | 1 |
immature NK T cell | 1.08e-19 | 1 |
effector T cell | 1.08e-19 | 1 |
mature NK T cell | 1.08e-19 | 1 |
immature NK T cell stage IV | 1.08e-19 | 1 |
immature NK T cell stage I | 1.08e-19 | 1 |
immature NK T cell stage II | 1.08e-19 | 1 |
immature NK T cell stage III | 1.08e-19 | 1 |
androgen binding protein secreting cell | 2.25e-19 | 1 |
seminiferous tubule epithelial cell | 2.25e-19 | 1 |
Sertoli cell | 2.25e-19 | 1 |
perirenal preadipocyte | 3.25e-19 | 1 |
thymocyte | 1.57e-10 | 2 |
double negative thymocyte | 1.57e-10 | 2 |
double-positive, alpha-beta thymocyte | 1.57e-10 | 2 |
DN4 thymocyte | 1.57e-10 | 2 |
DN1 thymic pro-T cell | 1.57e-10 | 2 |
DN2 thymocyte | 1.57e-10 | 2 |
DN3 thymocyte | 1.57e-10 | 2 |
immature single positive thymocyte | 1.57e-10 | 2 |
early T lineage precursor | 1.57e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.25e-19 | 1 |
seminiferous tubule of testis | 2.25e-19 | 1 |
epithelium of male gonad | 2.25e-19 | 1 |
epithelial cord | 2.25e-19 | 1 |
sex cord | 2.25e-19 | 1 |
seminiferous tubule epithelium | 2.25e-19 | 1 |
testis sex cord | 2.25e-19 | 1 |
genital ridge | 2.25e-19 | 1 |
primitive sex cord of indifferent gonad | 2.25e-19 | 1 |
coelomic epithelium | 2.25e-19 | 1 |
epithelium of gonad | 2.27e-10 | 2 |
perirenal fat | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.20e-21 | 8 |
leukemia | 8.12e-12 | 39 |
hematologic cancer | 4.76e-09 | 51 |
immune system cancer | 4.76e-09 | 51 |