FFCP PHASE1:Hg19::chrX:135579783..135579812,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:135579783..135579812,+
|short_description=p2@HTATSF1
|description=CAGE_peak_2_at_HTATSF1_5end
|association_with_transcript=63bp_to_ENST00000415377_5end
|E...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27336 | |EntrezGene=27336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5276 | |HGNC=5276 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFP2 | |UniProt=E9PFP2 | ||
|association_with_transcript=63bp_to_ENST00000415377_5end | |||
|cluster_id=chrX:135579783..135579812,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_2_at_HTATSF1_5end | |||
|id=chrX:135579783..135579812,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.31e-07,53;CL:0000051,3.31e-07,53;CL:0000838,8.46e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.09e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.42e-10!82;UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0005743!1.67e-09!86;UBERON:0000955!1.44e-07!69;UBERON:0006238!1.44e-07!69;UBERON:0001049!1.48e-07!57;UBERON:0005068!1.48e-07!57;UBERON:0006241!1.48e-07!57;UBERON:0007135!1.48e-07!57;UBERON:0002780!7.28e-07!41;UBERON:0001890!7.28e-07!41;UBERON:0006240!7.28e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.11e-07,89;UBERON:0001017,2.42e-07,81;UBERON:0001049,5.79e-07,56;UBERON:0005068,5.79e-07,56;UBERON:0006241,5.79e-07,56;UBERON:0007135,5.79e-07,56 | |||
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|short_description=p2@HTATSF1 | |||
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Latest revision as of 14:45, 19 September 2015
Short description: | p2@HTATSF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HTATSF1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 63bp_to_ENST00000415377_5end |
EntrezGene: | HTATSF1 |
HGNC: | 5276 |
UniProt: | E9PFP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.31e-07 | 53 |
common lymphoid progenitor | 3.31e-07 | 53 |
lymphoid lineage restricted progenitor cell | 8.46e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.11e-07 | 89 |
central nervous system | 2.42e-07 | 81 |
neural tube | 5.79e-07 | 56 |
neural rod | 5.79e-07 | 56 |
future spinal cord | 5.79e-07 | 56 |
neural keel | 5.79e-07 | 56 |