FFCP PHASE1:Mm9::chr16:4549406..4549436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1061|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:4549406..4549436,-|id=chr16:4549406..4549436,-|ontology_enrichment_celltype=CL:0002563!3.88e-07!9;CL:0002251!3.88e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,1.36e-12,3;CL:0002563,3.25e-10,9;CL:0002251,3.25e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.11e-21!43;UBERON:0005409!3.96e-16!59;UBERON:0000344!9.91e-14!15;UBERON:0001242!1.31e-11!13;UBERON:0000060!1.31e-11!13;UBERON:0001262!1.31e-11!13;UBERON:0004786!1.31e-11!13;UBERON:0003350!3.88e-07!9;UBERON:0004808!3.88e-07!9;UBERON:0001277!3.88e-07!9;UBERON:0004923!4.18e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.24e-48,31;UBERON:0005409,5.37e-34,47;UBERON:0000344,2.51e-18,15;UBERON:0001242,3.89e-17,13;UBERON:0001262,3.89e-17,13;UBERON:0004786,3.89e-17,13;UBERON:0001007,9.27e-13,116;UBERON:0001555,9.27e-13,116;UBERON:0007026,9.27e-13,116;UBERON:0004119,1.79e-12,118;UBERON:0000925,1.79e-12,118;UBERON:0006595,1.79e-12,118;UBERON:0004921,9.65e-12,114;UBERON:0000331,1.45e-11,3;UBERON:0002116,1.45e-11,3;UBERON:0001204,1.45e-11,3;UBERON:0001168,1.45e-11,3;UBERON:0004923,6.44e-11,24;UBERON:0003350,3.25e-10,9;UBERON:0004808,3.25e-10,9;UBERON:0001277,3.25e-10,9;UBERON:0002108,8.68e-09,4;UBERON:0001155,1.27e-08,2;UBERON:0000059,1.27e-08,2;UBERON:0000485,2.62e-08,11|phase1_expression=0,0.697950815278722,0,0.30246421130683,0,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,0.57423196411502,1.29228598847722,1.29282739611533,2.47030445293286,3.02436155711917,1.77384408524244,0,0,0,8.95440021228951,3.82339684324532,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0.239630249011841,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,1.9330119198314,2.21851877085677,3.33567065767305,2.09248188723815,1.89811624617805,1.31759163779209,1.25667604400135,1.79060824837036,0.58489226135736,0.898819408654221,3.02593269824572,2.98711909881551,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,7.12882353104861,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.0574354689556133,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr16:4549406..4549436,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1061 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:4549406..4549436,- | |||
|description=CAGE_peak_at_chr16:4549406..4549436,- | |||
|id=chr16:4549406..4549436,- | |||
|ontology_enrichment_celltype=CL:0002563!3.88e-07!9;CL:0002251!3.88e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.36e-12,3;CL:0002563,3.25e-10,9;CL:0002251,3.25e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.11e-21!43;UBERON:0005409!3.96e-16!59;UBERON:0000344!9.91e-14!15;UBERON:0001242!1.31e-11!13;UBERON:0000060!1.31e-11!13;UBERON:0001262!1.31e-11!13;UBERON:0004786!1.31e-11!13;UBERON:0003350!3.88e-07!9;UBERON:0004808!3.88e-07!9;UBERON:0001277!3.88e-07!9;UBERON:0004923!4.18e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.24e-48,31;UBERON:0005409,5.37e-34,47;UBERON:0000344,2.51e-18,15;UBERON:0001242,3.89e-17,13;UBERON:0001262,3.89e-17,13;UBERON:0004786,3.89e-17,13;UBERON:0001007,9.27e-13,116;UBERON:0001555,9.27e-13,116;UBERON:0007026,9.27e-13,116;UBERON:0004119,1.79e-12,118;UBERON:0000925,1.79e-12,118;UBERON:0006595,1.79e-12,118;UBERON:0004921,9.65e-12,114;UBERON:0000331,1.45e-11,3;UBERON:0002116,1.45e-11,3;UBERON:0001204,1.45e-11,3;UBERON:0001168,1.45e-11,3;UBERON:0004923,6.44e-11,24;UBERON:0003350,3.25e-10,9;UBERON:0004808,3.25e-10,9;UBERON:0001277,3.25e-10,9;UBERON:0002108,8.68e-09,4;UBERON:0001155,1.27e-08,2;UBERON:0000059,1.27e-08,2;UBERON:0000485,2.62e-08,11 | |||
|phase1_expression=0,0.697950815278722,0,0.30246421130683,0,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,0.57423196411502,1.29228598847722,1.29282739611533,2.47030445293286,3.02436155711917,1.77384408524244,0,0,0,8.95440021228951,3.82339684324532,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0.239630249011841,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,1.9330119198314,2.21851877085677,3.33567065767305,2.09248188723815,1.89811624617805,1.31759163779209,1.25667604400135,1.79060824837036,0.58489226135736,0.898819408654221,3.02593269824572,2.98711909881551,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,7.12882353104861,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.0574354689556133,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:4549406..4549436,- | |||
}} |
Latest revision as of 20:52, 3 August 2015
Short description: | p@chr16:4549406..4549436, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:4549406..4549436, - |
Coexpression cluster: | MCL_coexpression_mm9:1061 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.36e-12 | 3 |
intestinal epithelial cell | 3.25e-10 | 9 |
epithelial cell of alimentary canal | 3.25e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.24e-48 | 31 |
gastrointestinal system | 5.37e-34 | 47 |
mucosa | 2.51e-18 | 15 |
intestinal mucosa | 3.89e-17 | 13 |
wall of intestine | 3.89e-17 | 13 |
gastrointestinal system mucosa | 3.89e-17 | 13 |
digestive system | 9.27e-13 | 116 |
digestive tract | 9.27e-13 | 116 |
primitive gut | 9.27e-13 | 116 |
endoderm-derived structure | 1.79e-12 | 118 |
endoderm | 1.79e-12 | 118 |
presumptive endoderm | 1.79e-12 | 118 |
subdivision of digestive tract | 9.65e-12 | 114 |
ileal mucosa | 1.45e-11 | 3 |
ileum | 1.45e-11 | 3 |
mucosa of small intestine | 1.45e-11 | 3 |
wall of small intestine | 1.45e-11 | 3 |
organ component layer | 6.44e-11 | 24 |
epithelium of mucosa | 3.25e-10 | 9 |
gastrointestinal system epithelium | 3.25e-10 | 9 |
intestinal epithelium | 3.25e-10 | 9 |
small intestine | 8.68e-09 | 4 |
colon | 1.27e-08 | 2 |
large intestine | 1.27e-08 | 2 |
simple columnar epithelium | 2.62e-08 | 11 |