FFCP PHASE1:Hg19::chr5:167247340..167247349,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:167247340..167247349,+ | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr5:167247340..167247349,+ | |||
|id=chr5:167247340..167247349,+ | |||
|ontology_enrichment_celltype=CL:0002368!3.57e-21!13;CL:0002159!4.12e-21!13;CL:0002076!1.82e-15!43;CL:0002166!6.37e-12!3;CL:0002621!1.13e-11!3;CL:0002328!1.60e-11!3;CL:0002077!7.69e-11!33;CL:0000223!2.80e-10!59;CL:0002202!6.97e-10!9;CL:0002632!6.97e-10!9;CL:0000317!2.63e-08!2;CL:1000448!2.63e-08!2;CL:0002308!2.63e-08!2;CL:0002140!2.63e-08!2;CL:0002620!4.14e-08!23;CL:0000575!5.13e-08!2;CL:0000362!2.08e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002621;5.16e-37;3!CL:0002368;5.27e-24;13!CL:0002076;4.36e-23;42!CL:0002166;1.08e-17;3!CL:0002251;2.34e-15;20!CL:0002159;1.10e-14;14!CL:0002336;1.51e-13;1!CL:0002261;1.51e-13;1!CL:0002170;1.51e-13;1!CL:0000240;2.72e-09;6!CL:0000311;2.72e-09;6!CL:0000079;2.72e-09;6!CL:0000237;2.72e-09;6!CL:0002077;8.71e-08;34!CL:0000317;1.36e-07;2!CL:1000448;1.36e-07;2!CL:0002308;1.36e-07;2!CL:0002140;1.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,7.06e-37,3;CL:0002076,2.98e-28,42;CL:0002368,5.40e-24,13;CL:0000223,3.69e-20,58;CL:0002166,7.72e-18,3;CL:0002251,2.41e-15,20;CL:0002159,1.03e-14,14;CL:0002336,1.10e-13,1;CL:0002261,1.10e-13,1;CL:0002170,1.10e-13,1;CL:0000066,8.01e-11,253;CL:0002321,2.43e-09,250;CL:0000240,2.45e-09,6;CL:0000311,2.45e-09,6;CL:0000079,2.45e-09,6;CL:0000237,2.45e-09,6;CL:0000036,2.45e-09,6;CL:0000357,2.45e-09,6;CL:0000114,2.45e-09,6;CL:0002077,3.53e-09,34;CL:0000317,1.54e-07,2;CL:1000448,1.54e-07,2;CL:0002308,1.54e-07,2;CL:0002140,1.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;3.79e-10;58!CL:0000357;2.72e-09;6!CL:0000114;2.72e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.13e-11!3;UBERON:0004815!1.60e-11!3;UBERON:0002031!1.60e-11!3;UBERON:0001004!2.16e-11!72;UBERON:0003102!7.08e-11!95;UBERON:0000153!1.12e-10!129;UBERON:0007811!1.12e-10!129;UBERON:0004807!1.64e-10!28;UBERON:0002097!8.67e-10!40;UBERON:0000475!9.25e-10!365;UBERON:0000065!1.20e-09!53;UBERON:0000033!1.84e-09!123;UBERON:0001708!4.93e-09!4;UBERON:0001704!4.93e-09!4;UBERON:0002185!9.75e-09!4;UBERON:0002199!2.03e-08!45;UBERON:0002416!2.03e-08!45;UBERON:0002419!2.63e-08!2;UBERON:0007771!2.63e-08!2;UBERON:0003297!2.63e-08!2;UBERON:0001821!2.63e-08!2;UBERON:0003487!2.63e-08!2;UBERON:0001820!2.63e-08!2;UBERON:0005089!2.63e-08!2;UBERON:0005088!2.63e-08!2;UBERON:0000062!5.15e-07!511;UBERON:0004121!8.90e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.16e-37;3!UBERON:0003729;1.34e-23;13!UBERON:0003929;2.77e-16;7!UBERON:0000344;2.34e-15;20!UBERON:0003350;2.50e-14;8!UBERON:0001828;2.50e-14;8!UBERON:0004807;5.58e-14;22!UBERON:0001708;1.62e-13;4!UBERON:0008895;1.62e-13;4!UBERON:0011159;5.29e-11;5!UBERON:0000165;5.78e-11;28!UBERON:0000161;1.13e-10;19!UBERON:0000166;1.13e-10;19!UBERON:0010371;2.76e-10;31!UBERON:0000486;9.47e-10;12!UBERON:0000065;4.94e-08;44!UBERON:0005911;5.17e-08;36!UBERON:0002419;1.36e-07;2!UBERON:0007771;1.36e-07;2!UBERON:0003297;1.36e-07;2!UBERON:0001821;1.36e-07;2!UBERON:0003487;1.36e-07;2!UBERON:0001820;1.36e-07;2!UBERON:0001004;5.03e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.06e-37,3;UBERON:0003729,1.40e-23,13;UBERON:0001004,1.39e-15,74;UBERON:0000344,2.41e-15,20;UBERON:0003350,2.80e-14,8;UBERON:0001828,2.80e-14,8;UBERON:0001708,1.26e-13,4;UBERON:0008895,1.26e-13,4;UBERON:0011159,4.33e-11,5;UBERON:0004807,5.66e-11,28;UBERON:0000165,1.42e-10,29;UBERON:0000930,1.42e-10,29;UBERON:0000033,2.83e-10,56;UBERON:0010188,2.16e-09,6;UBERON:0002539,2.16e-09,6;UBERON:0008816,2.16e-09,6;UBERON:0000153,3.19e-09,62;UBERON:0007811,3.19e-09,62;UBERON:0000166,3.25e-09,22;UBERON:0003102,3.70e-09,99;UBERON:0000065,5.11e-08,54;UBERON:0004119,6.02e-08,160;UBERON:0000925,6.02e-08,160;UBERON:0006595,6.02e-08,160;UBERON:0002419,1.54e-07,2;UBERON:0007771,1.54e-07,2;UBERON:0003297,1.54e-07,2;UBERON:0001821,1.54e-07,2;UBERON:0003487,1.54e-07,2;UBERON:0001820,1.54e-07,2;UBERON:0005089,1.54e-07,2;UBERON:0005088,1.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0.506328996723799,0.292311015483596,0.252433774244115,0,0,0,0,0,1.15956511897978,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73150970389327,0,0.301586917234893,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.85569617938061,2.55195175036296,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,2.31398881505369,2.11409074101617,3.95599408733211,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,3.4851433719119,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37186772281816,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:167247340..167247349,+ | |||
}} |
Latest revision as of 12:43, 30 July 2015
Short description: | p@chr5:167247340..167247349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167247340..167247349, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 7.06e-37 | 3 |
endo-epithelial cell | 2.98e-28 | 42 |
respiratory epithelial cell | 5.40e-24 | 13 |
endodermal cell | 3.69e-20 | 58 |
epithelial cell of Malassez | 7.72e-18 | 3 |
epithelial cell of alimentary canal | 2.41e-15 | 20 |
general ecto-epithelial cell | 1.03e-14 | 14 |
buccal mucosa cell | 1.10e-13 | 1 |
endothelial cell of viscerocranial mucosa | 1.10e-13 | 1 |
keratinized cell of the oral mucosa | 1.10e-13 | 1 |
epithelial cell | 8.01e-11 | 253 |
embryonic cell | 2.43e-09 | 250 |
stratified squamous epithelial cell | 2.45e-09 | 6 |
keratin accumulating cell | 2.45e-09 | 6 |
stratified epithelial cell | 2.45e-09 | 6 |
keratinizing barrier epithelial cell | 2.45e-09 | 6 |
epithelial fate stem cell | 2.45e-09 | 6 |
stratified epithelial stem cell | 2.45e-09 | 6 |
surface ectodermal cell | 2.45e-09 | 6 |
ecto-epithelial cell | 3.53e-09 | 34 |
sebum secreting cell | 1.54e-07 | 2 |
epithelial cell of sweat gland | 1.54e-07 | 2 |
epithelial cell of skin gland | 1.54e-07 | 2 |
acinar cell of sebaceous gland | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.06e-37 | 3 |
mouth mucosa | 1.40e-23 | 13 |
respiratory system | 1.39e-15 | 74 |
mucosa | 2.41e-15 | 20 |
epithelium of mucosa | 2.80e-14 | 8 |
gingiva | 2.80e-14 | 8 |
jaw skeleton | 1.26e-13 | 4 |
splanchnocranium | 1.26e-13 | 4 |
primary subdivision of cranial skeletal system | 4.33e-11 | 5 |
respiratory system epithelium | 5.66e-11 | 28 |
mouth | 1.42e-10 | 29 |
stomodeum | 1.42e-10 | 29 |
head | 2.83e-10 | 56 |
protuberance | 2.16e-09 | 6 |
pharyngeal arch | 2.16e-09 | 6 |
embryonic head | 2.16e-09 | 6 |
anterior region of body | 3.19e-09 | 62 |
craniocervical region | 3.19e-09 | 62 |
oral opening | 3.25e-09 | 22 |
surface structure | 3.70e-09 | 99 |
respiratory tract | 5.11e-08 | 54 |
endoderm-derived structure | 6.02e-08 | 160 |
endoderm | 6.02e-08 | 160 |
presumptive endoderm | 6.02e-08 | 160 |
skin gland | 1.54e-07 | 2 |
epidermis gland | 1.54e-07 | 2 |
gland of integumental system | 1.54e-07 | 2 |
sebaceous gland | 1.54e-07 | 2 |
skin sebaceous gland | 1.54e-07 | 2 |
sweat gland | 1.54e-07 | 2 |
sweat gland placode | 1.54e-07 | 2 |
sebaceous gland placode | 1.54e-07 | 2 |