FFCP PHASE1:Hg19::chr6:10556451..10556476,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |||
|TSSclassifier=strong | |||
|UniProt=Q06430 | |||
|association_with_transcript=211bp_to_ENST00000316170_5end | |||
|cluster_id=chr6:10556451..10556476,+ | |||
|description=CAGE_peak_8_at_GCNT2_5end | |||
|id=chr6:10556451..10556476,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.26e-11!8;CL:0002139!6.07e-10!24;CL:0002319!1.27e-09!25;CL:0000540!1.70e-09!6;CL:0000031!1.70e-09!6;CL:0000404!1.70e-09!6;CL:0002322!4.44e-09!5;CL:0000133!7.67e-09!59;CL:0000071!5.07e-07!18;CL:0002546!5.07e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.08e-19;5!CL:0002144;5.81e-12;3!CL:0000540;1.73e-10;6!CL:0000404;1.73e-10;6!CL:0002138;8.16e-10;6!CL:0000039;8.40e-09;7!CL:0000586;8.40e-09;7!CL:0002321;1.01e-08;15!CL:0002139;2.17e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.10e-19,5;CL:0002144,6.39e-12,3;CL:0000047,1.08e-11,8;CL:0000540,1.91e-10,6;CL:0000031,1.91e-10,6;CL:0000404,1.91e-10,6;CL:0005020,7.54e-10,6;CL:0002138,7.54e-10,6;CL:0005022,7.54e-10,6;CL:0000039,1.05e-08,7;CL:0000586,1.05e-08,7;CL:0002139,2.12e-08,24;CL:0000133,2.08e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.73e-10;6!CL:0005022;8.16e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-33!82;UBERON:0005743!9.43e-33!86;UBERON:0000073!2.83e-32!94;UBERON:0001016!2.83e-32!94;UBERON:0001049!5.27e-26!57;UBERON:0005068!5.27e-26!57;UBERON:0006241!5.27e-26!57;UBERON:0007135!5.27e-26!57;UBERON:0007023!4.64e-25!115;UBERON:0003075!1.64e-24!86;UBERON:0007284!1.64e-24!86;UBERON:0002346!5.20e-24!90;UBERON:0000955!1.24e-22!69;UBERON:0006238!1.24e-22!69;UBERON:0002616!7.56e-22!59;UBERON:0004121!5.71e-20!169;UBERON:0000924!6.36e-20!173;UBERON:0006601!6.36e-20!173;UBERON:0002020!1.07e-19!34;UBERON:0003528!1.07e-19!34;UBERON:0001893!1.61e-19!34;UBERON:0002780!2.50e-19!41;UBERON:0001890!2.50e-19!41;UBERON:0006240!2.50e-19!41;UBERON:0002791!1.09e-18!33;UBERON:0003080!1.15e-18!42;UBERON:0003056!2.09e-18!61;UBERON:0001869!6.49e-18!32;UBERON:0000153!1.19e-16!129;UBERON:0007811!1.19e-16!129;UBERON:0000033!1.04e-15!123;UBERON:0002619!3.15e-14!22;UBERON:0001950!4.48e-14!20;UBERON:0000956!1.40e-13!25;UBERON:0000203!1.40e-13!25;UBERON:0000468!2.60e-10!659;UBERON:0004111!7.00e-10!241;UBERON:0000477!8.84e-10!286;UBERON:0000922!2.37e-09!612;UBERON:0000025!5.84e-09!194;UBERON:0000467!1.19e-08!625;UBERON:0000480!1.40e-08!626;UBERON:0003076!1.56e-08!15;UBERON:0003057!1.56e-08!15;UBERON:0000064!8.61e-08!219;UBERON:0001871!9.29e-08!7;UBERON:0002308!9.85e-08!9;UBERON:0000125!9.85e-08!9;UBERON:0004733!1.35e-07!12;UBERON:0002028!1.35e-07!12;UBERON:0007277!1.35e-07!12;UBERON:0001986!5.07e-07!18;UBERON:0004638!5.07e-07!18;UBERON:0004852!5.07e-07!18;UBERON:0000483!6.25e-07!309;UBERON:0004732!7.34e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.86e-23;49!UBERON:0010523;5.81e-12;3!UBERON:0001915;5.81e-12;3!UBERON:0001982;5.81e-12;3!UBERON:0000160;1.79e-08;17!UBERON:0000473;1.06e-07;8!UBERON:0001473;2.29e-07;8!UBERON:0004536;2.29e-07;8!UBERON:0006558;2.29e-07;8!UBERON:0002108;8.24e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.39e-12,3;UBERON:0001915,6.39e-12,3;UBERON:0001982,6.39e-12,3;UBERON:0000160,2.00e-08,17;UBERON:0000473,1.29e-07,8;UBERON:0001473,2.16e-07,8;UBERON:0004536,2.16e-07,8;UBERON:0006558,2.16e-07,8;UBERON:0002108,9.42e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,0.665188192387692,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0,0,2.34304428935269,2.01414658554573,4.56163263431108,5.6134273236079,0.367663080345869,0,0.267899184852239,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9282908984237,7.55419679432466,7.20402445791014,4.14644220061482,6.81266297364197,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17349457910277,0.117408694235822,3.75352764178792,1.38895653772983,3.80508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,2.17771144934653,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,1.10513566212459,0,0.409074730008619,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,3.05163472634166,6.63475559587348,0.886642856860642,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.59223616106011,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0,4.83962864194656,4.28501866282686,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16386819786103,0,1.58186518546373,0,0,0.633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,1.11585728720936,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0,6.59087908706579,5.91419577368105,7.06248574649615,0,0,0.668245123238271,0,0,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.05786081394152,0,0,0.106787412567695,1.72924735609633,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.665574309221114,0.372578417648301,0,0,0,0,0,0.936669811613763,7.82573554498456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81367616868034,0,0.786329709279482,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,2.01657356977374,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,3.28184885410932,0,0.992422356778588,0.703484977438482,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.203909198930495,0.328863867814245,0,0,0.706437835654626,0.628462359664008,0,2.73947616152849,0,0,0.929195074296532,1.58013611732727,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,2.66923297826242,1.1598144313382,0,0.233939463462106,2.18845852677505,0.118920090777569,0,0.329821550236287,0,0.694567422971502,1.09279780251979,0,1.22574160876953,0,0,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,3.05445483238264,1.5870805215462,0,0,0,0.883164973845552,3.38723273087456,0,5.09944148709909,4.27547848424897,1.10273879441814,11.0311317288645,0,0,0,0.310298987585686,0,1.42838658878244,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.808468755832877,0.435433495793923,1.36893320434112,0.26940821205835,0.286888821570705,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p8@GCNT2 | |||
}} |
Latest revision as of 14:04, 19 September 2015
Short description: | p8@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENST00000316170_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q06430 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.10e-19 | 5 |
capillary endothelial cell | 6.39e-12 | 3 |
neuronal stem cell | 1.08e-11 | 8 |
neuron | 1.91e-10 | 6 |
neuroblast | 1.91e-10 | 6 |
electrically signaling cell | 1.91e-10 | 6 |
lymphangioblast | 7.54e-10 | 6 |
endothelial cell of lymphatic vessel | 7.54e-10 | 6 |
vascular lymphangioblast | 7.54e-10 | 6 |
germ line cell | 1.05e-08 | 7 |
germ cell | 1.05e-08 | 7 |
endothelial cell of vascular tree | 2.12e-08 | 24 |
neurectodermal cell | 2.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.39e-12 | 3 |
endothelium of capillary | 6.39e-12 | 3 |
capillary | 6.39e-12 | 3 |
intestine | 2.00e-08 | 17 |
testis | 1.29e-07 | 8 |
lymphatic vessel | 2.16e-07 | 8 |
lymph vasculature | 2.16e-07 | 8 |
lymphatic part of lymphoid system | 2.16e-07 | 8 |
small intestine | 9.42e-07 | 4 |