FFCP PHASE1:Hg19::chr6:109777585..109777596,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20619 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDZ2 | |||
|association_with_transcript=-395bp_to_ENST00000358577,ENST00000358807,NM_001159291,NM_022765,uc003ptk.2,uc010kdr.2_5end | |||
|cluster_id=chr6:109777585..109777596,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_19_at_MICAL1_5end | |||
|id=chr6:109777585..109777596,- | |||
|ontology_enrichment_celltype=CL:0002591!9.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.97e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.85e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.86e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.33e-25!34;UBERON:0002780!1.38e-23!41;UBERON:0001890!1.38e-23!41;UBERON:0006240!1.38e-23!41;UBERON:0001869!4.41e-23!32;UBERON:0003080!5.83e-23!42;UBERON:0002791!2.58e-22!33;UBERON:0002020!8.58e-22!34;UBERON:0003528!8.58e-22!34;UBERON:0000369!1.84e-21!4;UBERON:0002435!1.84e-21!4;UBERON:0000204!1.84e-21!4;UBERON:0010082!1.84e-21!4;UBERON:0001049!3.75e-21!57;UBERON:0005068!3.75e-21!57;UBERON:0006241!3.75e-21!57;UBERON:0007135!3.75e-21!57;UBERON:0002616!2.54e-20!59;UBERON:0003056!1.29e-19!61;UBERON:0002346!1.29e-19!90;UBERON:0003075!1.26e-18!86;UBERON:0007284!1.26e-18!86;UBERON:0005383!1.04e-16!3;UBERON:0005382!1.04e-16!3;UBERON:0000955!1.37e-16!69;UBERON:0006238!1.37e-16!69;UBERON:0005743!2.68e-16!86;UBERON:0000033!3.84e-16!123;UBERON:0000153!3.62e-15!129;UBERON:0007811!3.62e-15!129;UBERON:0002308!1.46e-14!9;UBERON:0000125!1.46e-14!9;UBERON:0000073!2.14e-14!94;UBERON:0001016!2.14e-14!94;UBERON:0001950!5.87e-14!20;UBERON:0001017!1.92e-13!82;UBERON:0007023!6.27e-13!115;UBERON:0002619!1.22e-12!22;UBERON:0009663!2.56e-12!7;UBERON:0001873!1.06e-11!2;UBERON:0010122!1.06e-11!2;UBERON:0000956!4.85e-11!25;UBERON:0000203!4.85e-11!25;UBERON:0000924!5.47e-10!173;UBERON:0006601!5.47e-10!173;UBERON:0001872!1.34e-09!5;UBERON:0002420!1.35e-09!9;UBERON:0007245!1.35e-09!9;UBERON:0010009!1.35e-09!9;UBERON:0010011!1.35e-09!9;UBERON:0000454!1.35e-09!9;UBERON:0004121!2.93e-09!169;UBERON:0000481!2.80e-08!347;UBERON:0000200!8.68e-08!6;UBERON:0000025!9.80e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.15e-60;4!UBERON:0001873;9.86e-18;2!UBERON:0000078;9.86e-18;2!UBERON:0002012;9.86e-18;2!UBERON:0008886;9.86e-18;2!UBERON:0000160;2.57e-17;17!UBERON:0005409;9.85e-14;22!UBERON:0002114;2.07e-12;2!UBERON:0005383;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0000204;1.50e-09;4!UBERON:0004921;4.82e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.37e-60,4;UBERON:0001873,7.67e-18,2;UBERON:0010122,7.67e-18,2;UBERON:0000078,1.27e-17,2;UBERON:0007497,1.27e-17,2;UBERON:0003643,1.27e-17,2;UBERON:0003504,1.27e-17,2;UBERON:0003469,1.27e-17,2;UBERON:0003496,1.27e-17,2;UBERON:0002012,1.27e-17,2;UBERON:0008886,1.27e-17,2;UBERON:0007303,1.27e-17,2;UBERON:0002061,1.27e-17,2;UBERON:0005432,1.27e-17,2;UBERON:0004363,1.27e-17,2;UBERON:0000160,2.50e-17,17;UBERON:0002114,2.07e-12,2;UBERON:0005383,2.31e-12,3;UBERON:0005382,2.31e-12,3;UBERON:0005409,3.01e-12,25;UBERON:0004145,3.24e-12,3;UBERON:0000369,1.32e-09,4;UBERON:0002435,1.32e-09,4;UBERON:0000204,1.32e-09,4;UBERON:0010082,1.32e-09,4;UBERON:0003498,7.49e-08,5;UBERON:0005985,7.49e-08,5;UBERON:0010188,9.49e-07,6;UBERON:0002539,9.49e-07,6;UBERON:0003351,9.49e-07,6;UBERON:0008816,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,3.85870790539723,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@MICAL1 | |||
}} |
Latest revision as of 18:48, 19 September 2015
Short description: | p19@MICAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MICAL1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -395bp_to_ENST00000358577, ENST00000358807, NM_001159291, NM_022765, uc003ptk.2, uc010kdr.2_5end |
EntrezGene: | MICAL1 |
HGNC: | 20619 |
UniProt: | Q8TDZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.37e-60 | 4 |
caudate nucleus | 7.67e-18 | 2 |
future caudate nucleus | 7.67e-18 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.27e-17 | 2 |
developing epithelial placode | 1.27e-17 | 2 |
respiratory system arterial blood vessel | 1.27e-17 | 2 |
respiratory system blood vessel | 1.27e-17 | 2 |
respiratory system artery | 1.27e-17 | 2 |
head blood vessel | 1.27e-17 | 2 |
pulmonary artery | 1.27e-17 | 2 |
pulmonary vascular system | 1.27e-17 | 2 |
pharyngeal vasculature | 1.27e-17 | 2 |
truncus arteriosus | 1.27e-17 | 2 |
aortic sac | 1.27e-17 | 2 |
pharyngeal arch artery | 1.27e-17 | 2 |
intestine | 2.50e-17 | 17 |
duodenum | 2.07e-12 | 2 |
caudate-putamen | 2.31e-12 | 3 |
dorsal striatum | 2.31e-12 | 3 |
gastrointestinal system | 3.01e-12 | 25 |
outflow tract | 3.24e-12 | 3 |
corpus striatum | 1.32e-09 | 4 |
striatum | 1.32e-09 | 4 |
ventral part of telencephalon | 1.32e-09 | 4 |
future corpus striatum | 1.32e-09 | 4 |
heart blood vessel | 7.49e-08 | 5 |
coronary vessel | 7.49e-08 | 5 |
protuberance | 9.49e-07 | 6 |
pharyngeal arch | 9.49e-07 | 6 |
pharyngeal epithelium | 9.49e-07 | 6 |
embryonic head | 9.49e-07 | 6 |