FFCP PHASE1:Hg19::chr6:132270198..132270215,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=171bp_to_AF127918_5end | |||
|cluster_id=chr6:132270198..132270215,- | |||
|description=CAGE_peak_18_at_CTGF_5end | |||
|id=chr6:132270198..132270215,- | |||
|ontology_enrichment_celltype=CL:0000055!8.81e-19!180;CL:0000222!3.54e-16!119;CL:0000183!3.66e-11!59;CL:0000680!5.97e-10!57;CL:0000056!5.97e-10!57;CL:0000355!5.97e-10!57;CL:0000192!9.53e-10!42;CL:0000514!9.53e-10!42;CL:0000393!1.38e-09!60;CL:0000211!1.38e-09!60;CL:0000187!1.69e-09!54;CL:0000057!4.76e-09!75;CL:0000359!1.39e-08!32;CL:0000220!1.68e-08!246;CL:0002321!3.03e-08!248;CL:0000213!6.89e-08!57;CL:0000215!6.89e-08!57;CL:0002078!4.35e-07!44;CL:0000630!8.29e-07!9;CL:0002334!8.75e-07!12;CL:0000115!9.63e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.46e-09;3!CL:0000388;4.46e-09;3!CL:0000359;2.23e-08;32!CL:0000115;1.24e-07;36!CL:0000192;5.64e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.95e-10,121;CL:0000192,2.00e-09,43;CL:0000514,2.00e-09,43;CL:0000135,3.21e-09,3;CL:0000388,3.21e-09,3;CL:0000359,3.02e-08,32;CL:0000115,2.43e-07,36;CL:1000746,5.12e-07,7;CL:1000612,5.12e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000514;5.64e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.90e-20!79;UBERON:0007798!1.90e-20!79;UBERON:0004535!3.20e-16!110;UBERON:0001009!3.73e-16!113;UBERON:0000055!1.12e-15!69;UBERON:0004872!2.05e-14!84;UBERON:0003914!7.82e-13!118;UBERON:0001981!1.10e-12!60;UBERON:0007500!1.10e-12!60;UBERON:0004537!1.10e-12!60;UBERON:0006965!1.10e-12!60;UBERON:0001637!3.08e-12!42;UBERON:0003509!3.08e-12!42;UBERON:0004572!3.08e-12!42;UBERON:0000490!2.55e-10!138;UBERON:0002385!4.35e-10!63;UBERON:0001015!4.35e-10!63;UBERON:0000383!4.35e-10!63;UBERON:0001134!5.33e-10!61;UBERON:0002036!5.33e-10!61;UBERON:0003082!5.33e-10!61;UBERON:0004573!4.71e-09!33;UBERON:0004571!4.71e-09!33;UBERON:0002100!1.59e-08!216;UBERON:0004290!7.60e-08!70;UBERON:0005256!2.86e-07!143;UBERON:0004457!6.44e-07!12;UBERON:0000042!6.44e-07!12;UBERON:0000119!8.54e-07!312;UBERON:0000914!9.65e-07!83;UBERON:0002329!9.65e-07!83;UBERON:0003077!9.65e-07!83;UBERON:0003059!9.65e-07!83;UBERON:0007282!9.65e-07!83;UBERON:0009618!9.65e-07!83;UBERON:0007285!9.65e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.46e-09;3!UBERON:0000043;4.46e-09;3!UBERON:0007845;4.46e-09;3!UBERON:0001637;3.77e-08;42!UBERON:0003509;3.77e-08;42!UBERON:0004572;3.77e-08;42!UBERON:0004573;3.21e-07;33!UBERON:0004571;3.21e-07;33!UBERON:0005406;5.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.08e-10,78;UBERON:0007798,2.08e-10,78;UBERON:0001637,9.35e-10,42;UBERON:0003509,9.35e-10,42;UBERON:0004572,9.35e-10,42;UBERON:0007846,3.21e-09,3;UBERON:0000043,3.21e-09,3;UBERON:0007845,3.21e-09,3;UBERON:0000055,7.31e-09,68;UBERON:0007500,3.04e-08,59;UBERON:0001981,3.04e-08,59;UBERON:0004537,3.04e-08,59;UBERON:0006965,3.04e-08,59;UBERON:0004573,4.69e-08,33;UBERON:0004571,4.69e-08,33;UBERON:0005406,2.29e-07,2;UBERON:0001009,2.51e-07,112;UBERON:0007503,2.78e-07,78;UBERON:0010532,5.12e-07,7;UBERON:0000074,5.12e-07,7;UBERON:0001229,5.12e-07,7;UBERON:0001230,5.12e-07,7;UBERON:0003220,5.12e-07,7;UBERON:0005749,5.12e-07,7;UBERON:0004199,5.12e-07,7;UBERON:0004209,5.12e-07,7;UBERON:0004198,5.12e-07,7;UBERON:0003914,6.28e-07,117;UBERON:0004535,7.57e-07,109 | |||
|phase1_expression=1.63510541343501,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.246242116153576,0.816002764977012,0,0,0,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,2.50668955317945,1.30361867064741,0.795285947051099,1.45990461090791,0.472674085820339,1.77383517970051,0.702678285545008,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0.419499436209906,1.37559020970034,1.25396979922086,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.488124115096339,0,1.62028389576352,1.25019619597712,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0.633152558322899,0.529636723252875,0.573673241497627,0,1.12135520028461,0,0.98667019366864,0,0.67355336034844,0.817309515567294,1.05950199351452,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,1.83892677479412,0,0.794025282120147,0.179389635688862,0.213557388818567,0.423863802319124,1.20036438433761,0,0.772921620136887,0.18611685633159,0.675105328965065,0.292311015483596,0,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0.433099343283221,1.38895653772983,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.904902010304444,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.49076596687656,0,0,1.03985430765404,1.07057393278297,1.10391690523754,0.937131319941706,0.300946099727719,2.27407504055985,0,0,1.10621501125022,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,0.61384789315225,2.52594084989766,0.896974044789907,2.04682899626681,3.86049410744658,2.96836132889982,0.154209693802656,0.532685175939381,0.0821271560138091,0,0,0,0.601519410909855,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,1.53084334748864,1.72732732881711,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0.460511024178389,0.137836572484531,0.214840489736547,0,0,0,0,0,0.127612712494584,0,0,1.88887408098384,0,0.308033580176089,0.532306030317022,0,1.11194531462352,0.429374660225974,1.116475108079,0.949138274156178,0.571890581771475,0,0,0,1.56989728039846,1.43897966066652,0.274537029736055,0.235624804691373,1.01091240786658,4.75530963519025,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,1.32687795048244,1.31535265576129,1.15755106853338,1.31178950409327,1.01455188481352,0.6196469961995,0,0,0,0.7133421029625,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0.276283915531148,0,0.511343412510774,0,4.3545542272653,0,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0.264768380074501,0.677942222341597,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0.558564802544508,0,0,0,1.28767814440971,0,0,1.80149941771202,0,0,0,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0.0788057072991982,0,0,0.537862017998534,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0,1.70388021785422,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0.889811221596536,0,0,0.310874401165561,0.591420599958536,0.63718706865481,0,0.310525913752519,0,0.265841714557995,1.04349012362347,0.450772826991655,0.380805212168795,0,0.545545977607678,0,0,1.59238355479446,3.20022211730523,0.343395705182793,0,0,0,0.428883182749851,0.260994291965212,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0.168942440653073,0,1.38172136692479,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,1.05802783107205,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0.150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| |||
|short_description=p18@CTGF | |||
}} |
Latest revision as of 18:53, 24 September 2015
Short description: | p18@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CTGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 171bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.95e-10 | 121 |
smooth muscle cell | 2.00e-09 | 43 |
smooth muscle myoblast | 2.00e-09 | 43 |
fibrocyte | 3.21e-09 | 3 |
tendon cell | 3.21e-09 | 3 |
vascular associated smooth muscle cell | 3.02e-08 | 32 |
endothelial cell | 2.43e-07 | 36 |
glomerular cell | 5.12e-07 | 7 |
kidney corpuscule cell | 5.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.08e-10 | 78 |
vascular system | 2.08e-10 | 78 |
artery | 9.35e-10 | 42 |
arterial blood vessel | 9.35e-10 | 42 |
arterial system | 9.35e-10 | 42 |
dense regular connective tissue | 3.21e-09 | 3 |
tendon | 3.21e-09 | 3 |
regular connective tissue | 3.21e-09 | 3 |
vessel | 7.31e-09 | 68 |
epithelial tube open at both ends | 3.04e-08 | 59 |
blood vessel | 3.04e-08 | 59 |
blood vasculature | 3.04e-08 | 59 |
vascular cord | 3.04e-08 | 59 |
systemic artery | 4.69e-08 | 33 |
systemic arterial system | 4.69e-08 | 33 |
perirenal fat | 2.29e-07 | 2 |
circulatory system | 2.51e-07 | 112 |
epithelial vesicle | 2.78e-07 | 78 |
primitive nephron | 5.12e-07 | 7 |
renal glomerulus | 5.12e-07 | 7 |
renal corpuscle | 5.12e-07 | 7 |
glomerular capsule | 5.12e-07 | 7 |
metanephric mesenchyme | 5.12e-07 | 7 |
glomerular tuft | 5.12e-07 | 7 |
S-shaped body | 5.12e-07 | 7 |
renal vesicle | 5.12e-07 | 7 |
comma-shaped body | 5.12e-07 | 7 |
epithelial tube | 6.28e-07 | 117 |
cardiovascular system | 7.57e-07 | 109 |