FFCP PHASE1:Mm9::chr1:132742946..132742978,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=569|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132742946..132742978,+|id=chr1:132742946..132742978,+|ontology_enrichment_celltype=CL:0000066!4.52e-18!25;CL:0002563!2.79e-16!9;CL:0002251!2.79e-16!9;CL:0000223!1.46e-15!20;CL:0000239!2.27e-11!6;CL:0000677!2.27e-11!6;CL:0000212!2.27e-11!6;CL:0000584!2.27e-11!6;CL:0002076!6.96e-11!15;CL:0000075!1.28e-09!7|ontology_enrichment_celltype_v019_2=CL:0000066,2.74e-18,25;CL:0002563,2.65e-16,9;CL:0002251,2.65e-16,9;CL:0000223,7.52e-14,20;CL:0002250,1.18e-09,3;CL:0000682,1.79e-09,3;CL:0002076,2.04e-09,15;CL:0000239,8.28e-09,6;CL:0000677,8.28e-09,6;CL:0000584,8.28e-09,6;CL:0000075,1.49e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.98e-27!15;UBERON:0001242!1.40e-23!13;UBERON:0000060!1.40e-23!13;UBERON:0001262!1.40e-23!13;UBERON:0004786!1.40e-23!13;UBERON:0000160!1.58e-18!43;UBERON:0003350!2.79e-16!9;UBERON:0004808!2.79e-16!9;UBERON:0001277!2.79e-16!9;UBERON:0004923!1.41e-15!24;UBERON:0005409!4.07e-13!59;UBERON:0000485!5.90e-13!11;UBERON:0001007!1.76e-12!128;UBERON:0001555!1.76e-12!128;UBERON:0007026!1.76e-12!128;UBERON:0004119!3.83e-12!130;UBERON:0000925!3.83e-12!130;UBERON:0006595!3.83e-12!130;UBERON:0004921!9.95e-11!126;UBERON:0004185!9.95e-11!126;UBERON:0000331!7.48e-07!3;UBERON:0002116!7.48e-07!3;UBERON:0001204!7.48e-07!3;UBERON:0001168!7.48e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.96e-34,15;UBERON:0000160,8.27e-30,31;UBERON:0001242,9.33e-28,13;UBERON:0001262,9.33e-28,13;UBERON:0004786,9.33e-28,13;UBERON:0005409,1.30e-20,47;UBERON:0004923,3.49e-20,24;UBERON:0003350,2.65e-16,9;UBERON:0004808,2.65e-16,9;UBERON:0001277,2.65e-16,9;UBERON:0002108,2.81e-13,4;UBERON:0000485,3.56e-13,11;UBERON:0001007,1.82e-12,116;UBERON:0001555,1.82e-12,116;UBERON:0007026,1.82e-12,116;UBERON:0004119,3.59e-12,118;UBERON:0000925,3.59e-12,118;UBERON:0006595,3.59e-12,118;UBERON:0000331,2.87e-10,3;UBERON:0002116,2.87e-10,3;UBERON:0001204,2.87e-10,3;UBERON:0001168,2.87e-10,3;UBERON:0004921,3.57e-10,114;UBERON:0001962,8.64e-08,2;UBERON:0001961,8.64e-08,2;UBERON:0001744,8.64e-08,2|phase1_expression=0,4.53668029931169,0.909998478779072,6.0492842261366,3.00537437967808,0.839396359559449,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,5.27974995218242,5.50582274561208,3.44539178469012,2.58457197695445,1.72376986148711,12.3515222646643,5.29263272495855,1.10865255327652,0,0,0,4.33277429626912,2.99222361645286,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,4.31762553310254,3.24888208723835,2.24013443548668,0,0,0,0,0,0,0,0,0.216491041011214,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0194447844114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,1.85115396664481,0,0,0,0.403367049246685,0,0,2.84717436926707,0,0,0.198956472041151,0.58489226135736,4.49409704327111,3.8904848977445,3.58454291857861,0,0,0,0,0,0,0,0,0,0,2.66807364378434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46268449254406,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132742946..132742978,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=569 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:132742946..132742978,+ | |||
|description=CAGE_peak_at_chr1:132742946..132742978,+ | |||
|id=chr1:132742946..132742978,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.52e-18!25;CL:0002563!2.79e-16!9;CL:0002251!2.79e-16!9;CL:0000223!1.46e-15!20;CL:0000239!2.27e-11!6;CL:0000677!2.27e-11!6;CL:0000212!2.27e-11!6;CL:0000584!2.27e-11!6;CL:0002076!6.96e-11!15;CL:0000075!1.28e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.74e-18,25;CL:0002563,2.65e-16,9;CL:0002251,2.65e-16,9;CL:0000223,7.52e-14,20;CL:0002250,1.18e-09,3;CL:0000682,1.79e-09,3;CL:0002076,2.04e-09,15;CL:0000239,8.28e-09,6;CL:0000677,8.28e-09,6;CL:0000584,8.28e-09,6;CL:0000075,1.49e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.98e-27!15;UBERON:0001242!1.40e-23!13;UBERON:0000060!1.40e-23!13;UBERON:0001262!1.40e-23!13;UBERON:0004786!1.40e-23!13;UBERON:0000160!1.58e-18!43;UBERON:0003350!2.79e-16!9;UBERON:0004808!2.79e-16!9;UBERON:0001277!2.79e-16!9;UBERON:0004923!1.41e-15!24;UBERON:0005409!4.07e-13!59;UBERON:0000485!5.90e-13!11;UBERON:0001007!1.76e-12!128;UBERON:0001555!1.76e-12!128;UBERON:0007026!1.76e-12!128;UBERON:0004119!3.83e-12!130;UBERON:0000925!3.83e-12!130;UBERON:0006595!3.83e-12!130;UBERON:0004921!9.95e-11!126;UBERON:0004185!9.95e-11!126;UBERON:0000331!7.48e-07!3;UBERON:0002116!7.48e-07!3;UBERON:0001204!7.48e-07!3;UBERON:0001168!7.48e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.96e-34,15;UBERON:0000160,8.27e-30,31;UBERON:0001242,9.33e-28,13;UBERON:0001262,9.33e-28,13;UBERON:0004786,9.33e-28,13;UBERON:0005409,1.30e-20,47;UBERON:0004923,3.49e-20,24;UBERON:0003350,2.65e-16,9;UBERON:0004808,2.65e-16,9;UBERON:0001277,2.65e-16,9;UBERON:0002108,2.81e-13,4;UBERON:0000485,3.56e-13,11;UBERON:0001007,1.82e-12,116;UBERON:0001555,1.82e-12,116;UBERON:0007026,1.82e-12,116;UBERON:0004119,3.59e-12,118;UBERON:0000925,3.59e-12,118;UBERON:0006595,3.59e-12,118;UBERON:0000331,2.87e-10,3;UBERON:0002116,2.87e-10,3;UBERON:0001204,2.87e-10,3;UBERON:0001168,2.87e-10,3;UBERON:0004921,3.57e-10,114;UBERON:0001962,8.64e-08,2;UBERON:0001961,8.64e-08,2;UBERON:0001744,8.64e-08,2 | |||
|phase1_expression=0,4.53668029931169,0.909998478779072,6.0492842261366,3.00537437967808,0.839396359559449,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,5.27974995218242,5.50582274561208,3.44539178469012,2.58457197695445,1.72376986148711,12.3515222646643,5.29263272495855,1.10865255327652,0,0,0,4.33277429626912,2.99222361645286,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,4.31762553310254,3.24888208723835,2.24013443548668,0,0,0,0,0,0,0,0,0.216491041011214,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0194447844114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,1.85115396664481,0,0,0,0.403367049246685,0,0,2.84717436926707,0,0,0.198956472041151,0.58489226135736,4.49409704327111,3.8904848977445,3.58454291857861,0,0,0,0,0,0,0,0,0,0,2.66807364378434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46268449254406,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132742946..132742978,+ | |||
}} |
Latest revision as of 17:52, 4 August 2015
Short description: | p@chr1:132742946..132742978, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132742946..132742978, + |
Coexpression cluster: | MCL_coexpression_mm9:569 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.74e-18 | 25 |
intestinal epithelial cell | 2.65e-16 | 9 |
epithelial cell of alimentary canal | 2.65e-16 | 9 |
endodermal cell | 7.52e-14 | 20 |
intestinal crypt stem cell | 1.18e-09 | 3 |
M cell of gut | 1.79e-09 | 3 |
endo-epithelial cell | 2.04e-09 | 15 |
brush border epithelial cell | 8.28e-09 | 6 |
gut absorptive cell | 8.28e-09 | 6 |
enterocyte | 8.28e-09 | 6 |
columnar/cuboidal epithelial cell | 1.49e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.96e-34 | 15 |
intestine | 8.27e-30 | 31 |
intestinal mucosa | 9.33e-28 | 13 |
wall of intestine | 9.33e-28 | 13 |
gastrointestinal system mucosa | 9.33e-28 | 13 |
gastrointestinal system | 1.30e-20 | 47 |
organ component layer | 3.49e-20 | 24 |
epithelium of mucosa | 2.65e-16 | 9 |
gastrointestinal system epithelium | 2.65e-16 | 9 |
intestinal epithelium | 2.65e-16 | 9 |
small intestine | 2.81e-13 | 4 |
simple columnar epithelium | 3.56e-13 | 11 |
digestive system | 1.82e-12 | 116 |
digestive tract | 1.82e-12 | 116 |
primitive gut | 1.82e-12 | 116 |
endoderm-derived structure | 3.59e-12 | 118 |
endoderm | 3.59e-12 | 118 |
presumptive endoderm | 3.59e-12 | 118 |
ileal mucosa | 2.87e-10 | 3 |
ileum | 2.87e-10 | 3 |
mucosa of small intestine | 2.87e-10 | 3 |
wall of small intestine | 2.87e-10 | 3 |
subdivision of digestive tract | 3.57e-10 | 114 |
gut-associated lymphoid tissue | 8.64e-08 | 2 |
mucosa-associated lymphoid tissue | 8.64e-08 | 2 |
lymphoid tissue | 8.64e-08 | 2 |