FFCP PHASE1:Hg19::chrX:70329181..70329194,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:70329181..70329194,-
|short_description=p2@IL2RG
|description=CAGE_peak_2_at_IL2RG_5end
|association_with_transcript=45bp_to_uc004dyv.1_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3561 | |EntrezGene=3561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6010 | |HGNC=6010 | ||
|TSSclassifier=strong | |||
|UniProt=Q5FC10 | |UniProt=Q5FC10 | ||
|association_with_transcript=45bp_to_uc004dyv.1_5end | |||
|cluster_id=chrX:70329181..70329194,- | |||
|coexpression_cluster_id=C746 | |||
|description=CAGE_peak_2_at_IL2RG_5end | |||
|id=chrX:70329181..70329194,- | |||
|ontology_enrichment_celltype=CL:0000037!1.46e-67!172;CL:0000566!1.46e-67!172;CL:0000988!1.23e-64!182;CL:0002032!6.60e-62!165;CL:0000837!6.60e-62!165;CL:0000738!1.32e-57!140;CL:0002087!3.72e-48!119;CL:0002031!7.77e-48!124;CL:0000838!1.28e-37!52;CL:0000542!1.31e-36!53;CL:0000051!1.31e-36!53;CL:0000763!8.95e-26!112;CL:0000049!8.95e-26!112;CL:0000945!1.63e-20!24;CL:0000826!1.63e-20!24;CL:0002057!3.91e-16!42;CL:0000134!1.16e-15!358;CL:0000084!6.96e-15!25;CL:0000827!6.96e-15!25;CL:0000766!7.76e-15!76;CL:0002320!8.82e-15!365;CL:0000860!1.81e-14!45;CL:0002009!9.98e-14!65;CL:0000557!2.01e-13!71;CL:0000839!1.47e-12!70;CL:0002194!2.83e-12!63;CL:0000576!2.83e-12!63;CL:0000040!2.83e-12!63;CL:0000559!2.83e-12!63;CL:0000219!9.82e-12!390;CL:0000236!1.21e-11!14;CL:0000791!1.92e-10!18;CL:0000789!1.92e-10!18;CL:0002420!1.92e-10!18;CL:0002419!1.92e-10!18;CL:0000790!1.92e-10!18;CL:0000048!2.92e-08!430;CL:0000723!8.69e-08!436;CL:0000034!3.47e-07!444;CL:0000625!8.82e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.09e-15;53!CL:0000084;2.40e-12;25!CL:0000236;3.82e-12;13!CL:0000791;2.44e-11;18!CL:0000789;2.44e-11;18!CL:0002419;2.44e-11;18!CL:0000945;3.44e-10;24!CL:0000624;1.97e-09;6!CL:0002087;5.05e-08;104!CL:0000738;5.32e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.12e-24,52;CL:0000037,3.86e-24,168;CL:0000542,4.13e-24,53;CL:0000051,4.13e-24,53;CL:0000738,3.38e-23,136;CL:0000988,1.94e-22,177;CL:0002032,4.32e-21,161;CL:0000837,4.32e-21,161;CL:0002087,7.51e-20,115;CL:0002031,2.39e-17,120;CL:0000084,2.31e-12,25;CL:0000827,2.31e-12,25;CL:0000791,2.85e-11,18;CL:0000789,2.85e-11,18;CL:0002420,2.85e-11,18;CL:0002419,2.85e-11,18;CL:0000790,2.85e-11,18;CL:0000236,4.70e-11,14;CL:0000945,4.12e-10,24;CL:0000826,4.12e-10,24;CL:0000624,1.07e-09,6;CL:0000893,6.17e-08,2;CL:0002489,6.17e-08,2;CL:0000809,6.17e-08,2;CL:0000808,6.17e-08,2;CL:0000894,6.17e-08,2;CL:0000806,6.17e-08,2;CL:0000807,6.17e-08,2;CL:0000805,6.17e-08,2;CL:0002425,6.17e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.09e-15;53!CL:0000790;2.44e-11;18!CL:0002425;6.82e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!2.01e-16!51;DOID:0060083!2.01e-16!51;DOID:1240!2.10e-11!39;DOID:0060058!2.32e-08!10;DOID:8692!6.43e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.15e-21!102;UBERON:0003061!2.15e-21!102;UBERON:0002193!6.86e-20!112;UBERON:0002384!4.77e-14!375;UBERON:0002371!1.78e-12!80;UBERON:0001474!7.55e-11!86;UBERON:0002405!1.76e-10!115;UBERON:0004765!9.89e-08!101;UBERON:0001434!9.89e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@IL2RG | |||
}} | }} |
Latest revision as of 06:41, 16 September 2015
Short description: | p2@IL2RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL2RG_5end |
Coexpression cluster: | C746_Neutrophils_chronic_Monocytederived_CD4_Whole_Hodgkin_lymph |
Association with transcript: | 45bp_to_uc004dyv.1_5end |
EntrezGene: | IL2RG |
HGNC: | 6010 |
UniProt: | Q5FC10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.12e-24 | 52 |
hematopoietic stem cell | 3.86e-24 | 168 |
lymphocyte | 4.13e-24 | 53 |
common lymphoid progenitor | 4.13e-24 | 53 |
leukocyte | 3.38e-23 | 136 |
hematopoietic cell | 1.94e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.32e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.32e-21 | 161 |
nongranular leukocyte | 7.51e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 2.39e-17 | 120 |
T cell | 2.31e-12 | 25 |
pro-T cell | 2.31e-12 | 25 |
mature alpha-beta T cell | 2.85e-11 | 18 |
alpha-beta T cell | 2.85e-11 | 18 |
immature T cell | 2.85e-11 | 18 |
mature T cell | 2.85e-11 | 18 |
immature alpha-beta T cell | 2.85e-11 | 18 |
B cell | 4.70e-11 | 14 |
lymphocyte of B lineage | 4.12e-10 | 24 |
pro-B cell | 4.12e-10 | 24 |
CD4-positive, alpha-beta T cell | 1.07e-09 | 6 |
thymocyte | 6.17e-08 | 2 |
double negative thymocyte | 6.17e-08 | 2 |
double-positive, alpha-beta thymocyte | 6.17e-08 | 2 |
DN4 thymocyte | 6.17e-08 | 2 |
DN1 thymic pro-T cell | 6.17e-08 | 2 |
DN2 thymocyte | 6.17e-08 | 2 |
DN3 thymocyte | 6.17e-08 | 2 |
immature single positive thymocyte | 6.17e-08 | 2 |
early T lineage precursor | 6.17e-08 | 2 |