FFCP PHASE1:Hg19::chr6:26197500..26197521,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4766,4767,4768,4769,4771,4772,4773,4774,4775,4776 | |||
|TSSclassifier=strong | |||
|UniProt=P68431 | |||
|association_with_transcript=-22bp_to_ENST00000356476_5end | |||
|cluster_id=chr6:26197500..26197521,- | |||
|coexpression_cluster_id=C241 | |||
|description=CAGE_peak_10_at_HIST1H3H_5end,CAGE_peak_9_at_HIST1H3A_5end,CAGE_peak_9_at_HIST1H3B_5end,CAGE_peak_9_at_HIST1H3C_5end,CAGE_peak_9_at_HIST1H3D_5end,CAGE_peak_9_at_HIST1H3E_5end,CAGE_peak_9_at_HIST1H3F_5end,CAGE_peak_9_at_HIST1H3G_5end,CAGE_peak_9_at_HIST1H3I_5end,CAGE_peak_9_at_HIST1H3J_5end | |||
|id=chr6:26197500..26197521,- | |||
|ontology_enrichment_celltype=CL:0000542!5.29e-17!53;CL:0000051!5.29e-17!53;CL:0000838!1.64e-16!52;CL:0000003!1.88e-15!722;CL:0000012!3.11e-15!682;CL:0000548!5.82e-14!679;CL:0000004!5.82e-14!679;CL:0000255!5.82e-14!679;CL:0000144!9.00e-13!625;CL:0002371!3.00e-10!591;CL:0000084!7.65e-09!25;CL:0000827!7.65e-09!25;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000333!9.95e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.11e-10;53!CL:0000084;7.66e-09;25!CL:0000945;2.89e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.29e-17,53;CL:0000051,5.29e-17,53;CL:0000838,1.64e-16,52;CL:0000084,7.65e-09,25;CL:0000827,7.65e-09,25;CL:0000945,2.91e-08,24;CL:0000826,2.91e-08,24;CL:0000333,9.95e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000051;1.11e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!1.34e-14!51;DOID:0060083!1.34e-14!51;DOID:1240!1.01e-10!39;DOID:162!1.10e-08!235;DOID:14566!5.33e-08!239;DOID:8692!4.12e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.74e-09;51!DOID:0060083;3.74e-09;51!DOID:1240;2.51e-08;39!DOID:8692;7.75e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-14,51;DOID:0060083,1.34e-14,51;DOID:1240,1.01e-10,39;DOID:162,1.10e-08,235;DOID:14566,5.35e-08,239;DOID:8692,4.12e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=10.5373459976923,27.8330681058278,16.0688020669407,14.0102617694383,16.9845215882369,20.9361245784089,230.502889133163,27.1639545573537,25.857377191784,249.419945549031,570.103554233473,192.446848846682,117.112538333433,46.6599150659376,41.0932745902616,49.7520608374314,43.9967005457503,57.6944971406025,37.570825506869,230.113257545517,294.780998847946,233.523767501175,396.150606189383,433.618178630897,438.520440104646,200.050296248136,206.647183645513,229.284505966748,227.757916295515,248.337620568897,93.3541223595938,897.355115091433,552.110449120533,185.246759093561,1038.2154221772,416.27151272317,1212.56981445292,67.0334444323572,40.9110672839089,101.561087495019,34.7068985071883,43.0778575805243,26.5302834663212,22.391328772053,19.2716731281293,8.24785808038575,15.3403164357752,15.2132118568076,16.4144376574405,14.0969272237854,20.2366958157989,17.0267205519781,20.3399951634605,18.719055823931,12.1883837934908,13.7416907866101,22.1053981546855,20.0003901156125,13.1616073719488,19.2557416245656,11.5080682643827,14.8433085084022,23.3372479417309,8.52449501065388,13.0594157382863,17.0215567407342,13.7020894779026,18.3411525637423,21.3807996552283,14.3344637505377,23.6105806027014,29.8304885149927,25.0005286078299,73.3055843502438,59.7418082901772,99.3781979709702,51.3341844339483,29.4346709969352,28.9306056054744,345.720458158135,125.715339989825,172.982953615108,503.349259159383,381.204750660968,352.245664529968,305.538839357619,186.584529958782,379.911362809913,398.610058289272,503.740382394672,151.410649783113,136.826265123429,166.288854234475,715.04688761253,275.209704423934,921.054144458444,204.971580458614,373.753235374456,345.410518319175,150.635032347001,682.807148597372,592.756652779886,342.895041997924,364.089373100747,391.825856941533,294.8616136908,137.839166656393,533.884620616614,532.723087605261,930.718540056807,1140.77287341998,426.010536030527,264.394942117954,262.457552356009,195.481429515307,610.510738454487,585.560914223736,466.989698410894,162.69166196854,267.276382617917,250.667129734721,383.982625957143,82.6657403736973,64.5052520218269,176.152324438808,188.948247131125,341.589246719155,312.893665484785,343.393211386023,336.137441411976,75.5801285573281,182.430633839389,105.358750959069,95.0584970771409,43.6163982253224,52.1447468258965,63.6228757640879,84.187832562356,152.201055634149,113.081992705908,83.0038724800041,63.5248516163906,189.069254623829,310.346578610567,42.5157085687635,31.3433527138681,19.9436940778298,191.9849525658,332.329043163254,245.533408378842,390.170605660842,360.438295349466,179.818779832734,166.765842867583,168.638773356382,454.219887243051,556.553595887527,36.953596561214,18.8556119223956,12.0499420595281,123.668600352508,250.129522781391,135.454441939234,145.594579816964,111.799588807683,169.758783468036,214.874609603245,233.55621052241,2200.09374763542,978.692895014741,294.038799008304,26.3560834872127,58.1670396222488,112.076171400631,28.3274012466332,159.047922650712,5.29636723252875,39.0097804218387,221.313070491775,177.174121644969,428.063472876117,168.227268020503,42.635911849768,107.633826983681,194.519664705016,30.876915239566,80.0884535027198,364.13550506972,44.9510510635662,406.746408761192,62.0212024289974,467.154435604897,395.617476035713,318.121077180593,49.2011552724293,448.713761139888,37.5072585668029,54.6481314349745,82.587154379038,20.9337113245746,140.849155795983,466.796043994626,346.953655604957,49.5944766716687,200.612772742543,183.279701887814,82.0299801630019,275.640205078851,64.5802688479903,24.5590997141353,35.6045593948064,126.038260355449,58.4307840781949,22.930008064061,31.6398655763703,90.8016667458012,72.9803168657378,66.6425164004462,31.3890154370241,17.9427123068881,33.3709016965617,92.691930369429,135.309352663769,41.3578225769455,55.3674624799394,45.8887352622406,265.780705656388,320.987098874637,318.022821633872,292.42783619836,292.187545313978,414.249302551067,259.706223667494,109.994200430983,1670.05119915149,17.6459812652152,20.2126254867484,369.235522924353,282.210771190742,283.428971142975,340.4774938249,256.661985140854,284.724742933316,227.864910790678,176.991761543062,195.836302885713,109.985162739073,276.276294392788,72.025451982995,110.256533539156,1.26755034821831,7.86261773342101,15.3605375737165,2990.47103543484,138.23900492246,72.5731837562763,19.9745519443699,506.931907191864,240.264244063798,46.2942225792648,269.443468491639,212.146696197034,168.86767016957,92.5124631701113,30.291443112842,113.327661492443,227.325886675116,113.962237188524,830.504822255198,725.420806970167,70.664280747083,52.6509596563285,146.253063692109,97.4831873462481,12.5986596149145,31.7576217822946,111.679477810452,120.613084483294,638.715543489242,19.2138662779418,116.311981331472,54.9419506183046,56.9273815996998,60.9750953449415,177.794104018073,178.006606310157,567.332444496627,667.18253948855,161.233508558811,215.646315531933,25.724378936752,94.9750284405205,76.293012045824,306.774049589034,24.173810846704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| |||
|short_description=p10@HIST1H3H,p9@HIST1H3A,p9@HIST1H3B,p9@HIST1H3C,p9@HIST1H3D,p9@HIST1H3E,p9@HIST1H3F,p9@HIST1H3G,p9@HIST1H3I,p9@HIST1H3J | |||
}} |
Latest revision as of 08:54, 17 September 2015
Short description: | p10@HIST1H3H, p9@HIST1H3A, p9@HIST1H3B, p9@HIST1H3C, p9@HIST1H3D, p9@HIST1H3E, p9@HIST1H3F, p9@HIST1H3G, p9@HIST1H3I, p9@HIST1H3J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HIST1H3H_5end, CAGE_peak_9_at_HIST1H3A_5end, CAGE_peak_9_at_HIST1H3B_5end, CAGE_peak_9_at_HIST1H3C_5end, CAGE_peak_9_at_HIST1H3D_5end, CAGE_peak_9_at_HIST1H3E_5end, CAGE_peak_9_at_HIST1H3F_5end, CAGE_peak_9_at_HIST1H3G_5end, CAGE_peak_9_at_HIST1H3I_5end, CAGE_peak_9_at_HIST1H3J_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | -22bp_to_ENST00000356476_5end |
EntrezGene: | 8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 |
HGNC: | 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776&submit=Submit 4766, 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776 |
UniProt: | P68431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.29e-17 | 53 |
common lymphoid progenitor | 5.29e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.64e-16 | 52 |
T cell | 7.65e-09 | 25 |
pro-T cell | 7.65e-09 | 25 |
lymphocyte of B lineage | 2.91e-08 | 24 |
pro-B cell | 2.91e-08 | 24 |
migratory neural crest cell | 9.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.34e-14 | 51 |
immune system cancer | 1.34e-14 | 51 |
leukemia | 1.01e-10 | 39 |
cancer | 1.10e-08 | 235 |
disease of cellular proliferation | 5.35e-08 | 239 |
myeloid leukemia | 4.12e-07 | 31 |