FFCP PHASE1:Hg19::chr6:45296191..45296203,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |||
|TSSclassifier=strong | |||
|UniProt=Q13950 | |||
|association_with_transcript=85bp_to_ENST00000371438_5end | |||
|cluster_id=chr6:45296191..45296203,+ | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_13_at_RUNX2_5end | |||
|id=chr6:45296191..45296203,+ | |||
|ontology_enrichment_celltype=CL:0000128!3.52e-21!7;CL:0000126!3.52e-21!7;CL:0000127!3.52e-21!7;CL:0002453!3.52e-21!7;CL:0000243!5.72e-13!15;CL:0000125!5.72e-13!15;CL:0000030!5.72e-13!15;CL:0000339!5.72e-13!15;CL:0000095!2.07e-11!17;CL:0000123!2.07e-11!17;CL:0000064!4.52e-10!3;CL:0005012!4.52e-10!3;CL:0000067!4.52e-10!3;CL:0002304!4.52e-10!3;CL:0002605!4.52e-10!3;CL:0002603!5.74e-10!3;CL:0002319!3.16e-09!25;CL:0002540!1.90e-08!6;CL:0000133!1.45e-07!59;CL:0002092!1.94e-07!10;CL:0000221!9.98e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000128;6.04e-54;7!CL:0000126;6.04e-54;7!CL:0000127;6.04e-54;7!CL:0000243;2.39e-22;15!CL:0000125;2.39e-22;15!CL:0002603;1.67e-21;3!CL:0002605;4.93e-21;3!CL:0000095;5.19e-20;17!CL:0000062;2.93e-16;9!CL:0002319;4.13e-14;25!CL:0002540;5.09e-11;6!CL:0002092;5.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.40e-54,7;CL:0000126,8.40e-54,7;CL:0000127,8.40e-54,7;CL:0002453,8.40e-54,7;CL:0000243,2.73e-22,15;CL:0000125,2.73e-22,15;CL:0000030,2.73e-22,15;CL:0000339,2.73e-22,15;CL:0002603,1.76e-21,3;CL:0002605,4.94e-21,3;CL:0000095,5.85e-20,17;CL:0000123,5.85e-20,17;CL:0002319,4.49e-14,25;CL:0000062,2.02e-13,11;CL:0000375,2.02e-13,11;CL:0000335,2.02e-13,11;CL:0000333,1.74e-12,41;CL:0000133,9.05e-12,59;CL:0002540,5.09e-11,6;CL:0000221,1.28e-09,72;CL:0002092,5.76e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000339;2.39e-22;15!CL:0000335;2.02e-13;11!CL:0000133;5.49e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!4.52e-10!3;UBERON:0001775!4.52e-10!3;UBERON:0000488!1.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;2.16e-21;18!UBERON:0004765;7.71e-15;26!UBERON:0002037;2.98e-11;6!UBERON:0001434;6.28e-10;36!UBERON:0002680;8.45e-08;9!UBERON:0001895;8.45e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.06e-11,6;UBERON:0006215,3.06e-11,6;UBERON:0002680,8.60e-08,9;UBERON:0001895,8.60e-08,9;UBERON:0010092,8.60e-08,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33930010345897,0.204000691244253,5.95563970808367,1.43117993565528,1.23186982565596,0.376627918784408,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3633704291017,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28603687131071,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3502135286776,43.3174874583087,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0.16480387422676,0,0,0,0,1.02268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,83.9426457330679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.857440047187092,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.267964130156178,0,0,0.852935927603924,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p13@RUNX2 | |||
}} |
Latest revision as of 01:08, 19 September 2015
Short description: | p13@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RUNX2_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 85bp_to_ENST00000371438_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q13950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.40e-54 | 7 |
macroglial cell | 8.40e-54 | 7 |
astrocyte | 8.40e-54 | 7 |
oligodendrocyte precursor cell | 8.40e-54 | 7 |
glial cell (sensu Vertebrata) | 2.73e-22 | 15 |
glial cell | 2.73e-22 | 15 |
glioblast | 2.73e-22 | 15 |
glioblast (sensu Vertebrata) | 2.73e-22 | 15 |
astrocyte of the cerebellum | 1.76e-21 | 3 |
astrocyte of the cerebral cortex | 4.94e-21 | 3 |
neuron associated cell | 5.85e-20 | 17 |
neuron associated cell (sensu Vertebrata) | 5.85e-20 | 17 |
neural cell | 4.49e-14 | 25 |
osteoblast | 2.02e-13 | 11 |
osteoprogenitor cell | 2.02e-13 | 11 |
mesenchyme condensation cell | 2.02e-13 | 11 |
migratory neural crest cell | 1.74e-12 | 41 |
neurectodermal cell | 9.05e-12 | 59 |
mesenchymal stem cell of the bone marrow | 5.09e-11 | 6 |
ectodermal cell | 1.28e-09 | 72 |
bone marrow cell | 5.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.06e-11 | 6 |
rhombic lip | 3.06e-11 | 6 |
regional part of metencephalon | 8.60e-08 | 9 |
metencephalon | 8.60e-08 | 9 |
future metencephalon | 8.60e-08 | 9 |