FFCP PHASE1:Hg19::chr6:86159759..86159763,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |||
|TSSclassifier=strong | |||
|UniProt=P21589,Q96B60 | |||
|association_with_transcript=-45bp_to_ENST00000257770,ENST00000369646_5end | |||
|cluster_id=chr6:86159759..86159763,+ | |||
|description=CAGE_peak_6_at_NT5E_5end | |||
|id=chr6:86159759..86159763,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.28e-14!180;CL:0000359!2.43e-09!32;CL:0000057!3.07e-09!75;CL:0000680!3.58e-09!57;CL:0000056!3.58e-09!57;CL:0000355!3.58e-09!57;CL:0000192!4.51e-08!42;CL:0000514!4.51e-08!42;CL:0000499!6.78e-08!27;CL:0000187!7.15e-08!54;CL:0000183!1.18e-07!59;CL:0000222!1.27e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000499;2.32e-10;28!CL:0000359;8.28e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,8.36e-11,28;CL:0000057,6.70e-09,76;CL:0000359,1.05e-08,32;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43;CL:0000680,2.32e-07,58;CL:0000056,2.32e-07,58;CL:0000355,2.32e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.62e-14!83;UBERON:0002329!6.62e-14!83;UBERON:0003077!6.62e-14!83;UBERON:0003059!6.62e-14!83;UBERON:0007282!6.62e-14!83;UBERON:0009618!6.62e-14!83;UBERON:0007285!6.62e-14!83;UBERON:0005256!3.68e-12!143;UBERON:0000486!5.12e-11!82;UBERON:0002049!1.21e-10!79;UBERON:0007798!1.21e-10!79;UBERON:0004290!1.52e-10!70;UBERON:0000475!2.61e-10!365;UBERON:0002100!9.23e-10!216;UBERON:0000481!1.07e-09!347;UBERON:0002385!1.51e-09!63;UBERON:0001015!1.51e-09!63;UBERON:0000383!1.51e-09!63;UBERON:0000119!3.29e-09!312;UBERON:0000477!4.94e-09!286;UBERON:0001134!5.24e-09!61;UBERON:0002036!5.24e-09!61;UBERON:0003082!5.24e-09!61;UBERON:0004573!1.78e-08!33;UBERON:0004571!1.78e-08!33;UBERON:0000483!1.98e-08!309;UBERON:0001637!2.00e-08!42;UBERON:0003509!2.00e-08!42;UBERON:0004572!2.00e-08!42;UBERON:0004535!4.46e-08!110;UBERON:0000055!5.48e-08!69;UBERON:0001009!1.74e-07!113;UBERON:0001981!1.85e-07!60;UBERON:0007500!1.85e-07!60;UBERON:0004537!1.85e-07!60;UBERON:0006965!1.85e-07!60;UBERON:0000467!2.24e-07!625;UBERON:0000480!3.27e-07!626;UBERON:0000490!5.42e-07!138;UBERON:0004872!5.66e-07!84;UBERON:0003104!7.70e-07!238;UBERON:0009142!7.70e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;4.25e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.35e-10,73;UBERON:0002329,1.18e-09,71;UBERON:0003059,1.18e-09,71;UBERON:0007282,1.18e-09,71;UBERON:0004290,1.18e-09,71;UBERON:0009618,1.18e-09,71;UBERON:0003077,2.30e-09,72;UBERON:0007285,2.30e-09,72;UBERON:0007503,8.55e-09,78;UBERON:0000486,8.92e-09,83;UBERON:0003104,1.78e-08,160;UBERON:0009142,1.78e-08,160;UBERON:0002385,3.56e-08,64;UBERON:0001015,3.56e-08,64;UBERON:0000383,3.56e-08,64;UBERON:0001134,1.70e-07,62;UBERON:0002036,1.70e-07,62;UBERON:0003082,1.70e-07,62;UBERON:0000075,2.62e-07,16;UBERON:0005256,4.87e-07,122 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0.737201809504527,0,0.873765488520689,1.58260186937072,1.98026164736075,2.65117900582333,0,2.41077811209591,0.730310090387373,0.487932798790507,0.738726348460727,0.816002764977012,1.25381888591235,0,0.410623275218653,0.376627918784408,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.63841583378639,0.889509253863555,0,1.60158394814405,2.87376219977242,1.32208974556972,0.954053754535364,1.70763890732835,1.76171156811282,1.52909291250092,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0.164437904603676,0.552700035571697,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0,0,0,0.670700859703636,0.511450247374121,3.61439152384566,0.50133791063589,3.18662341713812,2.3858578411533,3.89307896242109,0.945348171640679,0.886917589850256,0.790513071238134,0.916853528483988,0.728590576585084,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.38856200643038,0,0.838998872419812,0.550236083880135,0.417989933073621,1.03366703667732,1.42306505074684,0.33472061276467,2.41697590265488,0,3.41686880567437,0.367663080345869,0.81014194788176,1.51809538082936,1.12264686313085,0.337834441449967,0,0,0,0,0,0.872188104285069,1.49091585508596,1.2663051166458,0.529636723252875,1.43418310374407,0.354668382198357,1.12135520028461,0,0.74000264525148,0.311211035399766,0.942974704487816,0.980771418680752,1.05950199351452,1.72852777344,0.234321431833797,3.74592092196385,1.71141546463335,3.13842229158782,3.05329696473789,0.647491777472526,1.68540968042698,3.0623125688234,3.0708579327942,1.65321249881225,2.37600571456411,1.7308685049499,0.910161361938026,0,2.35670559535693,3.1279629967991,2.77064115484183,2.63386572528503,1.5324389789951,2.40380894250555,0.680593098960126,0.358779271377724,0.213557388818567,1.27159140695737,0.900273288253207,1.03052529238439,0.257640540045629,0.558350568994769,1.35021065793013,0.68205903612839,0,0.736399189138395,1.61646056818812,1.77504796258307,1.71278566986988,0.508681776931463,0.966304265816484,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,2.16563844500876,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,3.43135620597051,0.548751427043128,0,1.3068766413512,1.01847289674383,0,0,1.44331342025273,4.05756417412769,0.939269553886573,2.30986316417718,0.925971025153221,2.09279567458058,0,0,0,0,0,0,0.503946384596579,1.55952606966625,2.50763863567975,1.16253575405585,1.15014803749563,0.492663237895943,0.264145302039678,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.719792448923265,0.600686115687835,0,2.35475277125258,2.1798003441664,3.3735611477637,1.29271715757778,0,1.690605505112,1.59562869950922,0,1.02882949704857,0,0.799266537048298,0.142977993658148,0,0,1.95441710576241,0.355391948742546,2.37585561880029,0.301439377059586,0,0.399891964728228,0,0,0,1.4377491329495,0,0,2.60606352001643,3.49309748335652,2.68591444859843,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.59498939234882,1.00034104211935,1.08506009479894,1.45579603071565,1.07057393278297,1.41932173530541,0.937131319941706,0.601892199455438,0,0,0,0.921845842708516,1.73767228936166,1.37060810223918,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,1.48864684691266,0.460385919864187,0.841980283299221,0.768834895534206,0,0.64341568457443,0,2.46735510084249,2.66342587969691,3.69572202062141,3.63478100428535,3.60252173225874,0,1.00253235151642,0.552485933615378,0.68888668898764,1.0925470080403,1.70461739447251,1.35359883872224,2.92658280996776,0,4.38417673959782,2.32213583564327,0,1.02056223165909,1.0795795805107,0,0.270946437543853,0,0.764628819135115,1.66215201785745,0.895499018888713,0,0,0,0.328014645699706,1.30151357865721,1.13345112812495,0.0915694648183434,0,1.14853107599234,0,1.6068392984416,1.25671933779759,0.770243085573222,0.460511024178389,0.689182862422653,0.644521469209642,1.30515024522806,1.02271952899321,0.356128142586949,0.826424576804891,0.960950336825531,0.765676274967505,0.6069466851333,0.929691098594572,4.09256050879832,1.3940745403212,2.7723022215848,3.19383618190213,0.869932992075073,3.33583594387056,0.858749320451947,1.116475108079,1.58189712359363,1.14378116354295,1.02359116524534,0.42793898803392,2.22742273548156,3.13979456079692,0,1.09814811894422,0.706874414074119,0.606547444719948,1.58510321173008,2.10629228119491,0,2.43713489631284,2.11300293513511,2.18399858252777,0.565621727814851,0,4.41092274836899,3.98063385144732,2.19225442626881,0,0,1.01455188481352,0.30982349809975,0.563391205064483,3.01163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| |||
|short_description=p6@NT5E | |||
}} |
Latest revision as of 01:05, 20 September 2015
Short description: | p6@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NT5E_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000257770, ENST00000369646_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | P21589Q96B60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 8.36e-11 | 28 |
fibroblast | 6.70e-09 | 76 |
vascular associated smooth muscle cell | 1.05e-08 | 32 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
muscle precursor cell | 2.32e-07 | 58 |
myoblast | 2.32e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.32e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 8.35e-10 | 73 |
somite | 1.18e-09 | 71 |
presomitic mesoderm | 1.18e-09 | 71 |
presumptive segmental plate | 1.18e-09 | 71 |
dermomyotome | 1.18e-09 | 71 |
trunk paraxial mesoderm | 1.18e-09 | 71 |
paraxial mesoderm | 2.30e-09 | 72 |
presumptive paraxial mesoderm | 2.30e-09 | 72 |
epithelial vesicle | 8.55e-09 | 78 |
multilaminar epithelium | 8.92e-09 | 83 |
mesenchyme | 1.78e-08 | 160 |
entire embryonic mesenchyme | 1.78e-08 | 160 |
muscle tissue | 3.56e-08 | 64 |
musculature | 3.56e-08 | 64 |
musculature of body | 3.56e-08 | 64 |
skeletal muscle tissue | 1.70e-07 | 62 |
striated muscle tissue | 1.70e-07 | 62 |
myotome | 1.70e-07 | 62 |
subdivision of skeletal system | 2.62e-07 | 16 |
trunk mesenchyme | 4.87e-07 | 122 |