FFCP PHASE1:Mm9::chr2:152430154..152430175,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=266620|HGNC=|MCL_coexpression_id=70|UniProt=Q8K3U4,D3Z4L0|association_with_transcript=91bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end|description=CAGE_peak_2_at_Defb36_5end|id=chr2:152430154..152430175,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!3.25e-38!15;UBERON:0003101!1.23e-35!16;UBERON:0000079!1.23e-35!16;UBERON:0000473!2.88e-35!14;UBERON:0004176!5.43e-33!17;UBERON:0009196!5.43e-33!17;UBERON:0009117!5.43e-33!17;UBERON:0000991!5.45e-31!18;UBERON:0005564!5.45e-31!18;UBERON:0003133!4.50e-26!24;UBERON:0005156!8.19e-24!26;UBERON:0000990!8.19e-24!26;UBERON:0003886!2.09e-17!38;UBERON:0002553!7.20e-17!39;UBERON:0002323!1.48e-15!37;UBERON:0004458!1.48e-15!37;UBERON:0000464!1.94e-10!57;UBERON:0001301!9.94e-10!3;UBERON:0006555!9.94e-10!3;UBERON:0005103!9.94e-10!3;UBERON:0000083!9.94e-10!3;UBERON:0009201!9.94e-10!3;UBERON:0004819!9.94e-10!3;UBERON:0006553!9.94e-10!3;UBERON:0003074!9.94e-10!3;UBERON:0003060!9.94e-10!3;UBERON:0003064!2.44e-09!14;UBERON:0002113!4.65e-09!14;UBERON:0003918!4.65e-09!14;UBERON:0005095!4.65e-09!14;UBERON:0007687!4.65e-09!14;UBERON:0006554!8.18e-08!16;UBERON:0000080!2.16e-07!4;UBERON:0005904!2.16e-07!4;UBERON:0006947!2.16e-07!4;UBERON:0002120!2.16e-07!4;UBERON:0004054!2.16e-07!4;UBERON:0004875!2.16e-07!4;UBERON:0004876!2.16e-07!4;UBERON:0005721!2.16e-07!4;UBERON:0005754!2.16e-07!4;UBERON:0007297!2.16e-07!4;UBERON:0001008!2.66e-07!17;UBERON:0001343!7.42e-07!2;UBERON:0004910!7.42e-07!2;UBERON:0004909!7.42e-07!2;UBERON:0005154!7.42e-07!2;UBERON:0005295!7.42e-07!2;UBERON:0005297!7.42e-07!2;UBERON:0005294!7.42e-07!2;UBERON:0010141!7.42e-07!2;UBERON:0005891!7.42e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.59e-47,15;UBERON:0003101,7.51e-44,16;UBERON:0000079,7.51e-44,16;UBERON:0000473,1.67e-41,14;UBERON:0004176,5.24e-34,17;UBERON:0009196,5.24e-34,17;UBERON:0009117,5.24e-34,17;UBERON:0000991,4.62e-32,18;UBERON:0005564,4.62e-32,18;UBERON:0003133,7.43e-29,24;UBERON:0005156,1.52e-26,26;UBERON:0000990,1.52e-26,26;UBERON:0003886,9.06e-18,38;UBERON:0002553,2.79e-17,39;UBERON:0002323,4.94e-15,37;UBERON:0004458,4.94e-15,37;UBERON:0001301,1.21e-08,3;UBERON:0006555,1.21e-08,3;UBERON:0005103,1.21e-08,3;UBERON:0000083,1.21e-08,3;UBERON:0009201,1.21e-08,3;UBERON:0004819,1.21e-08,3;UBERON:0006553,1.21e-08,3;UBERON:0003074,1.21e-08,3;UBERON:0003060,1.21e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8620562946244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0.173485326766136,1.21786191324856,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.373220911830279,6.31806896084187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.4234432976297,0.149516546043979,0.827292452285488,2.33341426012857,2.97067593998782,2.02747350588934,4.81164678447591,15.4943217964301,68.3682925655635,34.3049451572929,26.7867905819815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Defb36}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=266620 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3U4,D3Z4L0 | |||
|association_with_transcript=91bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end | |||
|cluster_id=chr2:152430154..152430175,+ | |||
|description=CAGE_peak_2_at_Defb36_5end | |||
|id=chr2:152430154..152430175,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.25e-38!15;UBERON:0003101!1.23e-35!16;UBERON:0000079!1.23e-35!16;UBERON:0000473!2.88e-35!14;UBERON:0004176!5.43e-33!17;UBERON:0009196!5.43e-33!17;UBERON:0009117!5.43e-33!17;UBERON:0000991!5.45e-31!18;UBERON:0005564!5.45e-31!18;UBERON:0003133!4.50e-26!24;UBERON:0005156!8.19e-24!26;UBERON:0000990!8.19e-24!26;UBERON:0003886!2.09e-17!38;UBERON:0002553!7.20e-17!39;UBERON:0002323!1.48e-15!37;UBERON:0004458!1.48e-15!37;UBERON:0000464!1.94e-10!57;UBERON:0001301!9.94e-10!3;UBERON:0006555!9.94e-10!3;UBERON:0005103!9.94e-10!3;UBERON:0000083!9.94e-10!3;UBERON:0009201!9.94e-10!3;UBERON:0004819!9.94e-10!3;UBERON:0006553!9.94e-10!3;UBERON:0003074!9.94e-10!3;UBERON:0003060!9.94e-10!3;UBERON:0003064!2.44e-09!14;UBERON:0002113!4.65e-09!14;UBERON:0003918!4.65e-09!14;UBERON:0005095!4.65e-09!14;UBERON:0007687!4.65e-09!14;UBERON:0006554!8.18e-08!16;UBERON:0000080!2.16e-07!4;UBERON:0005904!2.16e-07!4;UBERON:0006947!2.16e-07!4;UBERON:0002120!2.16e-07!4;UBERON:0004054!2.16e-07!4;UBERON:0004875!2.16e-07!4;UBERON:0004876!2.16e-07!4;UBERON:0005721!2.16e-07!4;UBERON:0005754!2.16e-07!4;UBERON:0007297!2.16e-07!4;UBERON:0001008!2.66e-07!17;UBERON:0001343!7.42e-07!2;UBERON:0004910!7.42e-07!2;UBERON:0004909!7.42e-07!2;UBERON:0005154!7.42e-07!2;UBERON:0005295!7.42e-07!2;UBERON:0005297!7.42e-07!2;UBERON:0005294!7.42e-07!2;UBERON:0010141!7.42e-07!2;UBERON:0005891!7.42e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.59e-47,15;UBERON:0003101,7.51e-44,16;UBERON:0000079,7.51e-44,16;UBERON:0000473,1.67e-41,14;UBERON:0004176,5.24e-34,17;UBERON:0009196,5.24e-34,17;UBERON:0009117,5.24e-34,17;UBERON:0000991,4.62e-32,18;UBERON:0005564,4.62e-32,18;UBERON:0003133,7.43e-29,24;UBERON:0005156,1.52e-26,26;UBERON:0000990,1.52e-26,26;UBERON:0003886,9.06e-18,38;UBERON:0002553,2.79e-17,39;UBERON:0002323,4.94e-15,37;UBERON:0004458,4.94e-15,37;UBERON:0001301,1.21e-08,3;UBERON:0006555,1.21e-08,3;UBERON:0005103,1.21e-08,3;UBERON:0000083,1.21e-08,3;UBERON:0009201,1.21e-08,3;UBERON:0004819,1.21e-08,3;UBERON:0006553,1.21e-08,3;UBERON:0003074,1.21e-08,3;UBERON:0003060,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8620562946244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0.173485326766136,1.21786191324856,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.373220911830279,6.31806896084187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.4234432976297,0.149516546043979,0.827292452285488,2.33341426012857,2.97067593998782,2.02747350588934,4.81164678447591,15.4943217964301,68.3682925655635,34.3049451572929,26.7867905819815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Defb36 | |||
}} |
Latest revision as of 22:12, 25 September 2015
Short description: | p2@Defb36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Defb36_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 91bp_to_ENSMUST00000058086, NM_001037247, uc008nfu.2_5end |
EntrezGene: | Defb36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 7.59e-47 | 15 |
male organism | 7.51e-44 | 16 |
male reproductive system | 7.51e-44 | 16 |
testis | 1.67e-41 | 14 |
external genitalia | 5.24e-34 | 17 |
indifferent external genitalia | 5.24e-34 | 17 |
indifferent gonad | 5.24e-34 | 17 |
gonad | 4.62e-32 | 18 |
gonad primordium | 4.62e-32 | 18 |
reproductive organ | 7.43e-29 | 24 |
reproductive structure | 1.52e-26 | 26 |
reproductive system | 1.52e-26 | 26 |
body cavity precursor | 9.06e-18 | 38 |
anatomical cavity | 2.79e-17 | 39 |
body cavity | 4.94e-15 | 37 |
body cavity or lining | 4.94e-15 | 37 |
epididymis | 1.21e-08 | 3 |
excretory tube | 1.21e-08 | 3 |
mesonephric epithelium | 1.21e-08 | 3 |
mesonephric tubule | 1.21e-08 | 3 |
nephric duct | 1.21e-08 | 3 |
kidney epithelium | 1.21e-08 | 3 |
renal duct | 1.21e-08 | 3 |
mesonephric duct | 1.21e-08 | 3 |
pronephric duct | 1.21e-08 | 3 |