FFCP PHASE1:Hg19::chr7:115723897..115723915,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:115723897..115723915,- | |||
|coexpression_cluster_id=C1022 | |||
|description=CAGE_peak_at_chr7:115723897..115723915,- | |||
|id=chr7:115723897..115723915,- | |||
|ontology_enrichment_celltype=CL:0000064!2.43e-60!3;CL:0005012!2.43e-60!3;CL:0000067!2.43e-60!3;CL:0002304!2.43e-60!3;CL:0000342!1.88e-21!1;CL:0002565!1.88e-21!1;CL:0000075!2.96e-12!27;CL:0000710!1.11e-09!20;CL:0000068!6.34e-08!3;CL:0000069!6.34e-08!3;CL:0000307!6.34e-08!3;CL:0000377!6.34e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.83e-66;3!CL:0000067;2.83e-66;3!CL:0005012;2.83e-66;3!CL:0002304;2.83e-66;3!CL:0000342;2.42e-50;1!CL:0002565;2.42e-50;1!CL:0000075;2.34e-17;27!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4!CL:0000710;5.56e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-66,3;CL:0000067,2.40e-66,3;CL:0005012,2.40e-66,3;CL:0002304,2.40e-66,3;CL:0000342,2.42e-50,1;CL:0002565,2.42e-50,1;CL:0000075,2.34e-17,27;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0000710,5.42e-11,20;CL:0002077,6.95e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!7.72e-21!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!6.32e-80!4;UBERON:0001778!2.43e-60!3;UBERON:0001775!2.43e-60!3;UBERON:0002203!1.58e-53!6;UBERON:0001768!1.58e-53!6;UBERON:0007625!1.96e-45!11;UBERON:0000019!1.23e-37!19;UBERON:0000047!1.23e-37!19;UBERON:0004088!1.23e-37!19;UBERON:0003072!1.23e-37!19;UBERON:0003071!1.23e-37!19;UBERON:0004128!1.23e-37!19;UBERON:0001801!8.82e-36!14;UBERON:0000970!9.19e-36!20;UBERON:0002104!4.56e-34!21;UBERON:0001456!4.56e-34!21;UBERON:0000020!4.06e-31!23;UBERON:0001032!7.94e-30!24;UBERON:0004456!7.94e-30!24;UBERON:0002200!1.76e-29!11;UBERON:0006876!1.76e-29!11;UBERON:0005085!1.06e-24!29;UBERON:0002506!1.88e-21!1;UBERON:0001769!1.88e-21!1;UBERON:0001444!6.20e-15!48;UBERON:0003056!1.50e-11!61;UBERON:0000063!7.40e-10!97;UBERON:0003075!3.40e-08!86;UBERON:0007284!3.40e-08!86;UBERON:0002346!7.91e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.08e-110;4!UBERON:0002203;2.92e-74;6!UBERON:0001768;2.92e-74;6!UBERON:0002200;2.92e-74;6!UBERON:0007625;6.65e-72;11!UBERON:0001778;2.83e-66;3!UBERON:0001775;2.83e-66;3!UBERON:0001801;9.12e-57;14!UBERON:0002506;2.42e-50;1!UBERON:0001769;2.42e-50;1!UBERON:0000019;3.83e-42;19!UBERON:0000047;3.83e-42;19!UBERON:0004088;3.83e-42;19!UBERON:0010230;3.83e-42;19!UBERON:0006876;4.36e-41;11!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0001456;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0010371;5.77e-26;31!UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0001444;6.77e-11;48!UBERON:0000033;9.04e-10;50!UBERON:0007811;1.03e-09;52!UBERON:0000153;4.06e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,8.91e-111,4;UBERON:0002203,2.58e-74,6;UBERON:0001768,2.58e-74,6;UBERON:0002200,2.58e-74,6;UBERON:0007625,6.65e-72,11;UBERON:0001778,2.40e-66,3;UBERON:0001775,2.40e-66,3;UBERON:0001801,9.13e-57,14;UBERON:0002506,2.42e-50,1;UBERON:0001769,2.42e-50,1;UBERON:0006876,4.07e-41,11;UBERON:0000019,4.28e-40,20;UBERON:0000047,4.28e-40,20;UBERON:0010312,4.28e-40,20;UBERON:0004088,4.28e-40,20;UBERON:0010230,4.28e-40,20;UBERON:0003072,4.28e-40,20;UBERON:0004128,4.28e-40,20;UBERON:0003071,4.28e-40,20;UBERON:0000970,3.06e-38,21;UBERON:0002104,3.06e-38,21;UBERON:0001456,1.49e-36,22;UBERON:0000020,1.33e-33,24;UBERON:0001032,1.33e-33,24;UBERON:0004456,1.33e-33,24;UBERON:0005085,2.93e-26,31;UBERON:0001444,5.55e-17,49;UBERON:0000033,5.62e-15,56;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0000153,1.29e-13,62;UBERON:0007811,1.29e-13,62;UBERON:0003056,1.29e-13,61;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0010371,2.22e-08,104;UBERON:0000076,1.80e-07,8;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06499713805492,1.77383517970051,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:115723897..115723915,- | |||
}} |
Latest revision as of 05:12, 31 July 2015
Short description: | p@chr7:115723897..115723915, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:115723897..115723915, - |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.40e-66 | 3 |
ciliated epithelial cell | 2.40e-66 | 3 |
multi-ciliated epithelial cell | 2.40e-66 | 3 |
non-pigmented ciliary epithelial cell | 2.40e-66 | 3 |
pigment cell (sensu Vertebrata) | 2.42e-50 | 1 |
iris pigment epithelial cell | 2.42e-50 | 1 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
neurecto-epithelial cell | 5.42e-11 | 20 |
ecto-epithelial cell | 6.95e-07 | 34 |