FFCP PHASE1:Hg19::chr7:131803806..131803815,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:131803806..131803815,+ | |||
|coexpression_cluster_id=C1408 | |||
|description=CAGE_peak_at_chr7:131803806..131803815,+ | |||
|id=chr7:131803806..131803815,+ | |||
|ontology_enrichment_celltype=CL:0000064!3.57e-46!3;CL:0005012!3.57e-46!3;CL:0000067!3.57e-46!3;CL:0002304!3.57e-46!3;CL:0002603!1.59e-21!3;CL:0000128!2.82e-20!7;CL:0000126!2.82e-20!7;CL:0000127!2.82e-20!7;CL:0002453!2.82e-20!7;CL:0000342!4.72e-17!1;CL:0002565!4.72e-17!1;CL:0000306!2.09e-16!4;CL:0002222!2.09e-16!4;CL:0002224!2.09e-16!4;CL:0000075!3.13e-14!27;CL:0002549!6.42e-09!2;CL:0000133!8.58e-09!59;CL:0000243!1.03e-08!15;CL:0000125!1.03e-08!15;CL:0000030!1.03e-08!15;CL:0000339!1.03e-08!15;CL:0000095!7.45e-08!17;CL:0000123!7.45e-08!17;CL:0000710!1.77e-07!20;CL:0000221!2.67e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000064;6.39e-53;3!CL:0000067;6.39e-53;3!CL:0005012;6.39e-53;3!CL:0002304;6.39e-53;3!CL:0000342;6.62e-41;1!CL:0002565;6.62e-41;1!CL:0002603;1.50e-14;3!CL:0000075;5.79e-14;27!CL:0000306;2.94e-11;4!CL:0002222;2.94e-11;4!CL:0002224;2.94e-11;4!CL:0000710;6.69e-09;20!CL:0000128;5.54e-07;7!CL:0000126;5.54e-07;7!CL:0000127;5.54e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.39e-53,3;CL:0000067,6.39e-53,3;CL:0005012,6.39e-53,3;CL:0002304,6.39e-53,3;CL:0000342,6.62e-41,1;CL:0002565,6.62e-41,1;CL:0002603,1.60e-14,3;CL:0000075,5.66e-14,27;CL:0000306,2.80e-11,4;CL:0002222,2.80e-11,4;CL:0002224,2.80e-11,4;CL:0000710,6.69e-09,20;CL:0000128,5.70e-07,7;CL:0000126,5.70e-07,7;CL:0000127,5.70e-07,7;CL:0002453,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.27e-61!4;UBERON:0007625!7.58e-50!11;UBERON:0001778!3.57e-46!3;UBERON:0001775!3.57e-46!3;UBERON:0002203!4.11e-41!6;UBERON:0001768!4.11e-41!6;UBERON:0001801!3.58e-39!14;UBERON:0002200!9.78e-35!11;UBERON:0006876!9.78e-35!11;UBERON:0000019!7.41e-29!19;UBERON:0000047!7.41e-29!19;UBERON:0004088!7.41e-29!19;UBERON:0003072!7.41e-29!19;UBERON:0003071!7.41e-29!19;UBERON:0004128!7.41e-29!19;UBERON:0000970!2.07e-27!20;UBERON:0002104!4.21e-26!21;UBERON:0001456!4.21e-26!21;UBERON:0000020!7.97e-24!23;UBERON:0001032!7.91e-23!24;UBERON:0004456!7.91e-23!24;UBERON:0005085!7.17e-19!29;UBERON:0002506!4.72e-17!1;UBERON:0001769!4.72e-17!1;UBERON:0003075!1.11e-16!86;UBERON:0007284!1.11e-16!86;UBERON:0010077!2.09e-16!4;UBERON:0005389!2.09e-16!4;UBERON:0000484!2.09e-16!4;UBERON:0002546!2.09e-16!4;UBERON:0000965!2.09e-16!4;UBERON:0001803!2.09e-16!4;UBERON:0003073!2.09e-16!4;UBERON:0005426!2.09e-16!4;UBERON:0002346!6.57e-16!90;UBERON:0003056!3.77e-15!61;UBERON:0000033!8.50e-14!123;UBERON:0000153!4.06e-13!129;UBERON:0007811!4.06e-13!129;UBERON:0001444!2.52e-11!48;UBERON:0002037!2.91e-11!6;UBERON:0006215!2.91e-11!6;UBERON:0004121!9.86e-10!169;UBERON:0000063!1.61e-09!97;UBERON:0000924!1.74e-09!173;UBERON:0006601!1.74e-09!173;UBERON:0003947!6.42e-09!2;UBERON:0005629!6.42e-09!2;UBERON:0005358!6.42e-09!2;UBERON:0001886!6.42e-09!2;UBERON:0004086!6.42e-09!2;UBERON:0005282!6.42e-09!2;UBERON:0005281!6.42e-09!2;UBERON:0001954!8.09e-09!2;UBERON:0003022!8.09e-09!2;UBERON:0002421!8.09e-09!2;UBERON:0002600!8.09e-09!2;UBERON:0000076!1.13e-08!8;UBERON:0002680!8.31e-08!9;UBERON:0001895!8.31e-08!9;UBERON:0010092!8.31e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.41e-88;4!UBERON:0002203;1.82e-59;6!UBERON:0001768;1.82e-59;6!UBERON:0002200;1.82e-59;6!UBERON:0007625;1.24e-57;11!UBERON:0001778;6.39e-53;3!UBERON:0001775;6.39e-53;3!UBERON:0001801;1.67e-45;14!UBERON:0002506;6.62e-41;1!UBERON:0001769;6.62e-41;1!UBERON:0000019;8.71e-34;19!UBERON:0000047;8.71e-34;19!UBERON:0004088;8.71e-34;19!UBERON:0010230;8.71e-34;19!UBERON:0006876;5.96e-33;11!UBERON:0000970;3.82e-32;20!UBERON:0002104;1.17e-30;21!UBERON:0001456;1.17e-30;21!UBERON:0000020;4.52e-28;23!UBERON:0001032;6.13e-27;24!UBERON:0004456;6.13e-27;24!UBERON:0010371;6.43e-20;31!UBERON:0010077;2.94e-11;4!UBERON:0005389;2.94e-11;4!UBERON:0000484;2.94e-11;4!UBERON:0000965;2.94e-11;4!UBERON:0001803;2.94e-11;4!UBERON:0007811;1.04e-08;52!UBERON:0001444;1.33e-08;48!UBERON:0002037;6.13e-08;6!UBERON:0000033;1.93e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.41e-88,4;UBERON:0002203,1.82e-59,6;UBERON:0001768,1.82e-59,6;UBERON:0002200,1.82e-59,6;UBERON:0007625,1.15e-57,11;UBERON:0001778,6.39e-53,3;UBERON:0001775,6.39e-53,3;UBERON:0001801,1.57e-45,14;UBERON:0002506,6.62e-41,1;UBERON:0001769,6.62e-41,1;UBERON:0006876,5.96e-33,11;UBERON:0000019,3.67e-32,20;UBERON:0000047,3.67e-32,20;UBERON:0010312,3.67e-32,20;UBERON:0004088,3.67e-32,20;UBERON:0010230,3.67e-32,20;UBERON:0003072,3.67e-32,20;UBERON:0004128,3.67e-32,20;UBERON:0003071,3.67e-32,20;UBERON:0000970,1.13e-30,21;UBERON:0002104,1.13e-30,21;UBERON:0001456,2.54e-29,22;UBERON:0000020,5.93e-27,24;UBERON:0001032,5.93e-27,24;UBERON:0004456,5.93e-27,24;UBERON:0005085,4.62e-21,31;UBERON:0001444,1.31e-13,49;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0000033,5.36e-12,56;UBERON:0010077,2.80e-11,4;UBERON:0005389,2.80e-11,4;UBERON:0000484,2.80e-11,4;UBERON:0002546,2.80e-11,4;UBERON:0000965,2.80e-11,4;UBERON:0001803,2.80e-11,4;UBERON:0003073,2.80e-11,4;UBERON:0005426,2.80e-11,4;UBERON:0000153,6.67e-11,62;UBERON:0007811,6.67e-11,62;UBERON:0003056,6.67e-11,61;UBERON:0010371,4.61e-10,104;UBERON:0010314,4.60e-08,132;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46242116153576,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.55210578223795,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49016992955282,0,0,0,0,0,0,2.88662684050547,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:131803806..131803815,+ | |||
}} |
Latest revision as of 06:12, 31 July 2015
Short description: | p@chr7:131803806..131803815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:131803806..131803815, + |
Coexpression cluster: | C1408_Iris_Ciliary_Lens_Retinal_Astrocyte_Smooth_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.39e-53 | 3 |
ciliated epithelial cell | 6.39e-53 | 3 |
multi-ciliated epithelial cell | 6.39e-53 | 3 |
non-pigmented ciliary epithelial cell | 6.39e-53 | 3 |
pigment cell (sensu Vertebrata) | 6.62e-41 | 1 |
iris pigment epithelial cell | 6.62e-41 | 1 |
astrocyte of the cerebellum | 1.60e-14 | 3 |
columnar/cuboidal epithelial cell | 5.66e-14 | 27 |
crystallin accumulating cell | 2.80e-11 | 4 |
vertebrate lens cell | 2.80e-11 | 4 |
lens epithelial cell | 2.80e-11 | 4 |
neurecto-epithelial cell | 6.69e-09 | 20 |
oligodendrocyte | 5.70e-07 | 7 |
macroglial cell | 5.70e-07 | 7 |
astrocyte | 5.70e-07 | 7 |
oligodendrocyte precursor cell | 5.70e-07 | 7 |