FFCP PHASE1:Hg19::chr7:140980284..140980289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:140980284..140980289,+ | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_at_chr7:140980284..140980289,+ | |||
|id=chr7:140980284..140980289,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.99e-23!24;CL:0000826!1.99e-23!24;CL:0000785!1.56e-15!2;CL:0000955!1.56e-15!2;CL:0000818!1.56e-15!2;CL:0000954!1.56e-15!2;CL:0000816!1.56e-15!2;CL:0000838!5.34e-15!52;CL:0000542!1.12e-14!53;CL:0000051!1.12e-14!53;CL:0000817!1.16e-10!3;CL:0000946!8.15e-09!1;CL:0000786!8.15e-09!1;CL:0000980!8.15e-09!1;CL:0000819!1.98e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.43e-36;24!CL:0000946;3.56e-19;1!CL:0000786;3.56e-19;1!CL:0000542;1.82e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.18e-36,24;CL:0000826,2.18e-36,24;CL:0000946,2.25e-19,1;CL:0000786,2.25e-19,1;CL:0000980,2.25e-19,1;CL:0000838,1.06e-16,52;CL:0000542,2.22e-16,53;CL:0000051,2.22e-16,53;CL:0000785,2.27e-10,2;CL:0000955,2.27e-10,2;CL:0000818,2.27e-10,2;CL:0000954,2.27e-10,2;CL:0000816,2.27e-10,2;CL:0000817,2.47e-07,3;CL:0002087,2.72e-07,115;CL:0002031,5.67e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.08e-19;1!CL:0000954;2.85e-10;2!CL:0000051;1.82e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.55e-25!10;DOID:1287!1.77e-17!4;DOID:114!6.94e-16!2;DOID:2355!5.59e-09!1;DOID:178!1.02e-08!1;DOID:326!1.02e-08!1;DOID:3978!1.02e-08!1;DOID:3394!1.02e-08!1;DOID:5844!1.02e-08!1;DOID:0060073!1.98e-08!1;DOID:8675!1.98e-08!1;DOID:0060060!2.64e-08!1;DOID:0060061!2.64e-08!1;DOID:8691!2.64e-08!1;DOID:171!7.48e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1287;2.70e-41;4!DOID:114;7.48e-37;2!DOID:2355;8.94e-20;1!DOID:178;3.56e-19;1!DOID:326;3.56e-19;1!DOID:3978;3.56e-19;1!DOID:3394;3.56e-19;1!DOID:5844;3.56e-19;1!DOID:0060058;5.40e-17;10!DOID:74;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,2.90e-41,4;DOID:114,8.20e-37,2;DOID:2355,8.95e-20,1;DOID:178,3.91e-19,1;DOID:326,3.91e-19,1;DOID:3978,3.91e-19,1;DOID:3394,3.91e-19,1;DOID:5844,3.91e-19,1;DOID:0060058,5.86e-17,10;DOID:74,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.87e-12!27;UBERON:0004151!7.87e-11!3;UBERON:0003978!1.62e-10!3;UBERON:0009751!1.62e-10!3;UBERON:0000946!1.62e-10!3;UBERON:0002523!1.62e-10!3;UBERON:0005983!1.62e-10!3;UBERON:0002165!1.62e-10!3;UBERON:0002062!1.62e-10!3;UBERON:0007280!1.62e-10!3;UBERON:0002079!6.03e-09!1;UBERON:0002146!1.27e-08!1;UBERON:0005623!1.27e-08!1;UBERON:0002084!1.48e-08!1;UBERON:0002082!1.48e-08!1;UBERON:0004706!1.48e-08!1;UBERON:0002135!2.13e-08!1;UBERON:0002902!4.07e-08!1;UBERON:0009899!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.08e-19;1!UBERON:0002081;1.57e-10;2!UBERON:0004151;1.93e-07;3!UBERON:0007100;3.76e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.08e-19,1;UBERON:0002081,1.57e-10,2;UBERON:0010227,1.57e-10,2;UBERON:0004151,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36881557818649,1.31360943119913,1.57421562627358,0,0,0,0,0,0,1.00707360754392,2.84338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.916641696046735,0,1.19807400299395,2.57535628881943,0.89268582976749,0,0,0,0,0,0,0,17.9507463979463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:140980284..140980289,+ | |||
}} |
Latest revision as of 06:46, 31 July 2015
Short description: | p@chr7:140980284..140980289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:140980284..140980289, + |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.18e-36 | 24 |
pro-B cell | 2.18e-36 | 24 |
antibody secreting cell | 2.25e-19 | 1 |
plasma cell | 2.25e-19 | 1 |
plasmablast | 2.25e-19 | 1 |
lymphoid lineage restricted progenitor cell | 1.06e-16 | 52 |
lymphocyte | 2.22e-16 | 53 |
common lymphoid progenitor | 2.22e-16 | 53 |
mature B cell | 2.27e-10 | 2 |
pre-B-II cell | 2.27e-10 | 2 |
transitional stage B cell | 2.27e-10 | 2 |
small pre-B-II cell | 2.27e-10 | 2 |
immature B cell | 2.27e-10 | 2 |
precursor B cell | 2.47e-07 | 3 |
nongranular leukocyte | 2.72e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.67e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.08e-19 | 1 |
cardiac atrium | 1.57e-10 | 2 |
future cardiac atrium | 1.57e-10 | 2 |
cardiac chamber | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 2.90e-41 | 4 |
heart disease | 8.20e-37 | 2 |
anemia | 8.95e-20 | 1 |
vascular disease | 3.91e-19 | 1 |
ischemia | 3.91e-19 | 1 |
extrinsic cardiomyopathy | 3.91e-19 | 1 |
myocardial ischemia | 3.91e-19 | 1 |
myocardial infarction | 3.91e-19 | 1 |
lymphoma | 5.86e-17 | 10 |
hematopoietic system disease | 1.43e-10 | 2 |