FFCP PHASE1:Mm9::chr3:95085684..95085715,-: Difference between revisions
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{{FFCP|EntrezGene=229589|HGNC=|UniProt=Q8BIW1|association_with_transcript=282bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end|description=CAGE_peak_2_at_Prune_5end|id=chr3:95085684..95085715,-|ontology_enrichment_celltype=CL:0000117!9.50e-12!23;CL:0000337!9.50e-12!23;CL:0000540!7.52e-07!33;CL:0000047!7.52e-07!33;CL:0000031!7.52e-07!33;CL:0000404!7.52e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.49e-12,23;CL:0000337,9.49e-12,23;CL:0000540,7.52e-07,33;CL:0000047,7.52e-07,33;CL:0000031,7.52e-07,33;CL:0000404,7.52e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.71e-09!73;UBERON:0005743!6.71e-09!73;UBERON:0002020!2.38e-08!34;UBERON:0000073!2.61e-08!75;UBERON:0001016!2.61e-08!75;UBERON:0001049!4.80e-08!52;UBERON:0005068!4.80e-08!52;UBERON:0006241!4.80e-08!52;UBERON:0007135!4.80e-08!52;UBERON:0000955!4.80e-07!50;UBERON:0006238!4.80e-07!50;UBERON:0002616!8.58e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.76e-09,54;UBERON:0001017,6.71e-09,73;UBERON:0002020,2.38e-08,34;UBERON:0001016,2.61e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010314,5.08e-07,92|phase1_expression=1.92178616525753,5.23463111459042,4.09499315450582,3.0246421130683,4.00716583957078,3.86122325397347,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,1.19852577757853,1.27635454392538,1.36960583944965,1.22388563386596,2.99798785634096,2.22722794128809,3.49780939064073,0.473193248037357,1.23402990245165,0,3.57181818634493,1.29078236561151,0.783599367416806,3.83981814704176,2.06468352960453,5.7423196411502,3.4460959692726,6.03319451520489,3.6104449696711,3.78045194639896,3.10422714917427,1.90509202037889,0.61506478758457,0,3.17736781726402,2.49351968037739,1.83752420636132,4.18531630736908,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,3.88408282424923,1.38486499773135,1.72340783073175,2.38610777810186,3.12956537739216,3.92445281484804,3.29529274101708,2.72201858703997,2.51975558925653,7.18762821824858,1.17447824240415,0,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,11.7343547298567,7.93486468908049,9.50747105259269,1.35537812827653,4.4464739805557,3.1496490104849,4.94433181283487,3.5524005747305,4.49400165777607,6.91592949578798,6.32506635081714,5.8052553482627,6.94072372459561,6.56997264128748,6.18431914664518,7.10446635446733,7.09256485534949,8.27296907949019,5.50579404996943,6.76742891851495,6.60508093001847,12.7929699098288,11.7104183811084,11.4600941522487,6.42120897703176,1.68828783009504,5.50073691996516,11.490514833473,9.39653093274079,8.38797506213853,1.51452386666368,3.40072020480535,2.31891590961342,2.58127163094416,1.3599426674155,4.31762553310254,3.24888208723835,2.24013443548668,6.60088774619234,1.87473354835864,1.03914401841148,4.24007489412408,2.81686839553361,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,4.22480354960522,2.84831672011889,3.26572705942614,1.90833859442749,2.74018930480927,6.91846491768175,2.86373017049983,4.35078216402108,3.01599819191221,9.64060374164058,5.35017620603673,2.65383165584962,9.54424414689714,4.63767188766826,3.39412677194655,7.45567044872489,7.02673912827713,5.02672096352292,4.34276993854605,1.43778149407104,0,1.27070227073065,5.84183493678809,3.66000482254901,6.40837195775608,5.9100268865374,6.90431734791892,4.98691306942944,4.54275536589721,2.95334155165917,3.73220911830279,3.0326731012041,3.15662783829711,3.12289063110489,1.83921683546778,2.88099407688559,3.16480117455002,3.33378845841506,3.45907044769094,3.74806898238915,2.32833033665114,4.52692785158969,3.02569728268511,3.69497360744293,5.04150184583422,1.94633074457919,3.48252166522167,2.67516777330327,4.97585667046233,1.40442637462647,1.28673953557358,1.70498099637356,5.17814431338755,3.51789089971644,4.8616756594474,5.20838418287463,5.70616272067471,5.707883176833,7.67362017676346,6.43856163359086,5.83826711835847,6.08871444679878,6.07419617092652,3.72916523910936,5.84799949701329,5.26920276698522,5.36825675041487,3.57492912559016,6.38008596751563,5.28670052774077,3.70230793328962,4.90562976231038,3.71578674976702,3.22168653305233,3.42861991859682,2.89091456998331,2.47293313946327,5.69434873853414,3.45867804920423,3.51869292320377,4.57599885694647,3.11942539390592,3.59527763461689,4.75503709724327,4.77939055810481,2.27601481143698,2.85621281524322,4.50830942692322,1.4255592949172,3.49114476901726,2.59502533594179,3.85742876457969,3.24742325555125,2.82597710114475,3.08492909804501,3.85388415213294,2.66952169145751,1.96558995113203,2.02375901146368,1.62288097110802,2.17059443777175,1.01850340712568,3.16465751195892,2.2698931748505,4.66754402419738,2.87536413054709,2.97712758134803,6.55279113540577,3.03094653536534,1.97337154874103,4.3419916922703,3.69506380333209,4.35830247072115,3.7481944581666,2.37643120085263,4.22442446919304,2.1775813467436,1.6663054862021,1.36593553500459,2.52216230569906,2.43611158613652,2.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229589 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIW1 | |||
|association_with_transcript=282bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end | |||
|cluster_id=chr3:95085684..95085715,- | |||
|description=CAGE_peak_2_at_Prune_5end | |||
|id=chr3:95085684..95085715,- | |||
|ontology_enrichment_celltype=CL:0000117!9.50e-12!23;CL:0000337!9.50e-12!23;CL:0000540!7.52e-07!33;CL:0000047!7.52e-07!33;CL:0000031!7.52e-07!33;CL:0000404!7.52e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.49e-12,23;CL:0000337,9.49e-12,23;CL:0000540,7.52e-07,33;CL:0000047,7.52e-07,33;CL:0000031,7.52e-07,33;CL:0000404,7.52e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.71e-09!73;UBERON:0005743!6.71e-09!73;UBERON:0002020!2.38e-08!34;UBERON:0000073!2.61e-08!75;UBERON:0001016!2.61e-08!75;UBERON:0001049!4.80e-08!52;UBERON:0005068!4.80e-08!52;UBERON:0006241!4.80e-08!52;UBERON:0007135!4.80e-08!52;UBERON:0000955!4.80e-07!50;UBERON:0006238!4.80e-07!50;UBERON:0002616!8.58e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.76e-09,54;UBERON:0001017,6.71e-09,73;UBERON:0002020,2.38e-08,34;UBERON:0001016,2.61e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010314,5.08e-07,92 | |||
|phase1_expression=1.92178616525753,5.23463111459042,4.09499315450582,3.0246421130683,4.00716583957078,3.86122325397347,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,1.19852577757853,1.27635454392538,1.36960583944965,1.22388563386596,2.99798785634096,2.22722794128809,3.49780939064073,0.473193248037357,1.23402990245165,0,3.57181818634493,1.29078236561151,0.783599367416806,3.83981814704176,2.06468352960453,5.7423196411502,3.4460959692726,6.03319451520489,3.6104449696711,3.78045194639896,3.10422714917427,1.90509202037889,0.61506478758457,0,3.17736781726402,2.49351968037739,1.83752420636132,4.18531630736908,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,3.88408282424923,1.38486499773135,1.72340783073175,2.38610777810186,3.12956537739216,3.92445281484804,3.29529274101708,2.72201858703997,2.51975558925653,7.18762821824858,1.17447824240415,0,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,11.7343547298567,7.93486468908049,9.50747105259269,1.35537812827653,4.4464739805557,3.1496490104849,4.94433181283487,3.5524005747305,4.49400165777607,6.91592949578798,6.32506635081714,5.8052553482627,6.94072372459561,6.56997264128748,6.18431914664518,7.10446635446733,7.09256485534949,8.27296907949019,5.50579404996943,6.76742891851495,6.60508093001847,12.7929699098288,11.7104183811084,11.4600941522487,6.42120897703176,1.68828783009504,5.50073691996516,11.490514833473,9.39653093274079,8.38797506213853,1.51452386666368,3.40072020480535,2.31891590961342,2.58127163094416,1.3599426674155,4.31762553310254,3.24888208723835,2.24013443548668,6.60088774619234,1.87473354835864,1.03914401841148,4.24007489412408,2.81686839553361,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,4.22480354960522,2.84831672011889,3.26572705942614,1.90833859442749,2.74018930480927,6.91846491768175,2.86373017049983,4.35078216402108,3.01599819191221,9.64060374164058,5.35017620603673,2.65383165584962,9.54424414689714,4.63767188766826,3.39412677194655,7.45567044872489,7.02673912827713,5.02672096352292,4.34276993854605,1.43778149407104,0,1.27070227073065,5.84183493678809,3.66000482254901,6.40837195775608,5.9100268865374,6.90431734791892,4.98691306942944,4.54275536589721,2.95334155165917,3.73220911830279,3.0326731012041,3.15662783829711,3.12289063110489,1.83921683546778,2.88099407688559,3.16480117455002,3.33378845841506,3.45907044769094,3.74806898238915,2.32833033665114,4.52692785158969,3.02569728268511,3.69497360744293,5.04150184583422,1.94633074457919,3.48252166522167,2.67516777330327,4.97585667046233,1.40442637462647,1.28673953557358,1.70498099637356,5.17814431338755,3.51789089971644,4.8616756594474,5.20838418287463,5.70616272067471,5.707883176833,7.67362017676346,6.43856163359086,5.83826711835847,6.08871444679878,6.07419617092652,3.72916523910936,5.84799949701329,5.26920276698522,5.36825675041487,3.57492912559016,6.38008596751563,5.28670052774077,3.70230793328962,4.90562976231038,3.71578674976702,3.22168653305233,3.42861991859682,2.89091456998331,2.47293313946327,5.69434873853414,3.45867804920423,3.51869292320377,4.57599885694647,3.11942539390592,3.59527763461689,4.75503709724327,4.77939055810481,2.27601481143698,2.85621281524322,4.50830942692322,1.4255592949172,3.49114476901726,2.59502533594179,3.85742876457969,3.24742325555125,2.82597710114475,3.08492909804501,3.85388415213294,2.66952169145751,1.96558995113203,2.02375901146368,1.62288097110802,2.17059443777175,1.01850340712568,3.16465751195892,2.2698931748505,4.66754402419738,2.87536413054709,2.97712758134803,6.55279113540577,3.03094653536534,1.97337154874103,4.3419916922703,3.69506380333209,4.35830247072115,3.7481944581666,2.37643120085263,4.22442446919304,2.1775813467436,1.6663054862021,1.36593553500459,2.52216230569906,2.43611158613652,2.55127629851979,2.62181303545181,2.76295970985433,2.89298117163023,1.50791283939272,2.17562273527484,1.96705709207614,3.03530420935206,5.61927064957272,4.68846746368813,4.09837363441689,11.6136626514012,2.83957397474631,1.17131623288992,2.36965737506079,2.62865677747807,3.34198011123591,5.09537755419898,2.83367491172426,2.33804686329049,4.34816555741176,5.46246237917072,3.83238230062325,4.27357448801413,3.90928702448583,4.94910368917606,5.30980553359851,2.91336763385978,3.32555912661226,2.45186603682668,2.06711325016541,3.07435147943927,0.775284879504663,3.27180356529755,2.49548164869305,2.21225730555071,2.10837217149998,2.06271086496374,4.76615448055303,1.98067203434441,2.8458910432206,3.21505552547388,3.19212420556092,2.31879462882692,2.30368628842969,4.87143918583359,5.16277757740163,9.10877904714427,1.54369878638473,3.2977250588296,2.74489525383039,4.52346936961169,2.02932984805332,2.1338316966858,6.99554007911642,4.82105785227325,3.07567585436135,2.47664241555867,2.03713980106683,2.0720530270516,2.7338845544205,1.60144721244566,1.69978429993855,1.11961161858926,1.38199973804424,5.72802370809068,3.63786392618306,1.62655573701479,2.70013352054503,3.3454127362315,2.40198820120795,3.50647300600534,3.8020589633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| |||
|short_description=p2@Prune | |||
}} |
Latest revision as of 23:12, 25 September 2015
Short description: | p2@Prune |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prune_5end |
Coexpression cluster: | NA |
Association with transcript: | 282bp_to_ENSMUST00000015855, NM_173347, uc008qiz.1_5end |
EntrezGene: | Prune |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.49e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.49e-12 | 23 |
neuron | 7.52e-07 | 33 |
neuronal stem cell | 7.52e-07 | 33 |
neuroblast | 7.52e-07 | 33 |
electrically signaling cell | 7.52e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.76e-09 | 54 |
central nervous system | 6.71e-09 | 73 |
gray matter | 2.38e-08 | 34 |
nervous system | 2.61e-08 | 75 |
neural tube | 4.80e-08 | 52 |
neural rod | 4.80e-08 | 52 |
future spinal cord | 4.80e-08 | 52 |
neural keel | 4.80e-08 | 52 |
structure with developmental contribution from neural crest | 5.08e-07 | 92 |