FFCP PHASE1:Mm9::chr4:116828749..116828779,-: Difference between revisions
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{{FFCP|EntrezGene=20116|HGNC=|UniProt=P62242,Q497E9,D3YW44|association_with_transcript=-12bp_to_NM_009098,uc008uic.1_5end|description=CAGE_peak_3_at_Rps8_5end|id=chr4:116828749..116828779,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.93e-07,3;CL:0000351,1.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.19e-10,14;UBERON:0002323,2.43e-09,37;UBERON:0004458,2.43e-09,37;UBERON:0003135,2.68e-09,15;UBERON:0000991,3.27e-09,18;UBERON:0005564,3.27e-09,18;UBERON:0003886,5.44e-09,38;UBERON:0002553,1.16e-08,39;UBERON:0003101,1.35e-08,16;UBERON:0000079,1.35e-08,16;UBERON:0004176,5.65e-08,17;UBERON:0009196,5.65e-08,17;UBERON:0009117,5.65e-08,17;UBERON:0000358,1.93e-07,3;UBERON:0000307,1.93e-07,3;UBERON:0007010,1.93e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0.856089841127525,0.717949430958028,0,0,0.999329285446988,1.21485160433896,0.699561878128147,0,0.685572168028694,0,0,0.794327609607082,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0,0,0.304130793658544,0.917733760808408,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0.979904951377538,1.43752564364972,0.167782606057736,0,0,1.28629718017973,0.286533439938757,0.515672092277442,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.274462930807229,0,0,0,0.45839474333043,0.589257170947335,0.427115042397309,0.372798891650601,2.42323818666189,0.982430281388212,0,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0,2.4287945747259,0.608930956624282,0.461230994512117,1.05505848386836,0.117588707135705,0,0.247194967734374,0,0,0.808834249737046,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,2.39961092397363,0.635351135365324,0.299581278809645,0,0.125654352112864,0.521472960576829,0.511430914660661,0,0.324482526135515,0.305518091550949,0.497627882440372,0,0,0.520481771850815,0.229902104433473,0,0.452114453507145,0.204109497453984,0.384341160854549,0.281105173679186,0,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0,1.99034266818493,0.702213187313235,0.257347907114715,0.284163499395593,1.24275463521301,1.17263029990548,0.36012412292203,0,0.393528463494808,0.617068451549513,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0.793351699990633,1.06644125267617,1.16118335930219,1.41754207454303,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,2.0863469104839,0.913988100877831,0,0.407302655690628,0.581857461502877,0.210407459670956,0.189709611372772,0,0.31399745568275,0.246794327843601,0,1.50160595144485,4.91397487783007,0.899448449539415,0.405720242777006,0.72353147925725,0.50925170356284,0,0.162135226775035,2.19649130550465,0,0,0,0.505157755894224,0,0,0,0.947457058852424,0.488894929326078,0.509235257325564,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,3.44263385291018,0,1.26203287766503,0.780877488593277,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,1.21390318077491,2.11626489875326,1.50884063804718,0.295301892880773,1.22974059177571,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,0,1.08036656418786,0.517434735131018,0,0.177340233642274,0.713475270408282,0,0.304464949114599,0.938686832254841,0.63549621259146,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.512612642393558,0.82554747185289,1.11116716421827,1.50694765603753,0.820165366326151,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,1.73984796469624,0.609958401380546,0.540026704109006,0.209088296014469,0,0.269728692769641,0.247960367176008,0.523511883968059,0,0.621339313086926,0,3.13984746692355,5.46013018508422,2.72231663681667,2.19571699912143,1.35164900392623,1.5256441023948,2.47388331203505,2.83120229949419,1.44950472495604,0.288030006257865,0,1.01362607645082,1.74608627180206,2.20865399062252,0.716106782669926,0.993406773906324,0.480781798079875,0.590758108698309,0.504832249740738,0.685861259894999,0.302478555410522,0.194915761479505,0.481059208201647,0.116876902181569,0,5.10567692760349,6.81825310232015,6.71538465456314,0,0.187682475451182,0.36630324853453,0.643105137237198,0,1.12950368523413,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,1.14166082342594,1.19707462020309,1.02440163452481,1.21553358534147,0.628839487883947,0.367687016900028,0.888986911206461,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.561849044819294,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0,0.950628796921032,2.24456908663095,0.118635018124174,0.591026894253381,0.818462086339379,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p3@Rps8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20116 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P62242,Q497E9,D3YW44 | |||
|association_with_transcript=-12bp_to_NM_009098,uc008uic.1_5end | |||
|cluster_id=chr4:116828749..116828779,- | |||
|description=CAGE_peak_3_at_Rps8_5end | |||
|id=chr4:116828749..116828779,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.93e-07,3;CL:0000351,1.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.19e-10,14;UBERON:0002323,2.43e-09,37;UBERON:0004458,2.43e-09,37;UBERON:0003135,2.68e-09,15;UBERON:0000991,3.27e-09,18;UBERON:0005564,3.27e-09,18;UBERON:0003886,5.44e-09,38;UBERON:0002553,1.16e-08,39;UBERON:0003101,1.35e-08,16;UBERON:0000079,1.35e-08,16;UBERON:0004176,5.65e-08,17;UBERON:0009196,5.65e-08,17;UBERON:0009117,5.65e-08,17;UBERON:0000358,1.93e-07,3;UBERON:0000307,1.93e-07,3;UBERON:0007010,1.93e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0.856089841127525,0.717949430958028,0,0,0.999329285446988,1.21485160433896,0.699561878128147,0,0.685572168028694,0,0,0.794327609607082,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0,0,0.304130793658544,0.917733760808408,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0.979904951377538,1.43752564364972,0.167782606057736,0,0,1.28629718017973,0.286533439938757,0.515672092277442,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.274462930807229,0,0,0,0.45839474333043,0.589257170947335,0.427115042397309,0.372798891650601,2.42323818666189,0.982430281388212,0,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0,2.4287945747259,0.608930956624282,0.461230994512117,1.05505848386836,0.117588707135705,0,0.247194967734374,0,0,0.808834249737046,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,2.39961092397363,0.635351135365324,0.299581278809645,0,0.125654352112864,0.521472960576829,0.511430914660661,0,0.324482526135515,0.305518091550949,0.497627882440372,0,0,0.520481771850815,0.229902104433473,0,0.452114453507145,0.204109497453984,0.384341160854549,0.281105173679186,0,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0,1.99034266818493,0.702213187313235,0.257347907114715,0.284163499395593,1.24275463521301,1.17263029990548,0.36012412292203,0,0.393528463494808,0.617068451549513,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0.793351699990633,1.06644125267617,1.16118335930219,1.41754207454303,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,2.0863469104839,0.913988100877831,0,0.407302655690628,0.581857461502877,0.210407459670956,0.189709611372772,0,0.31399745568275,0.246794327843601,0,1.50160595144485,4.91397487783007,0.899448449539415,0.405720242777006,0.72353147925725,0.50925170356284,0,0.162135226775035,2.19649130550465,0,0,0,0.505157755894224,0,0,0,0.947457058852424,0.488894929326078,0.509235257325564,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,3.44263385291018,0,1.26203287766503,0.780877488593277,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,1.21390318077491,2.11626489875326,1.50884063804718,0.295301892880773,1.22974059177571,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,0,1.08036656418786,0.517434735131018,0,0.177340233642274,0.713475270408282,0,0.304464949114599,0.938686832254841,0.63549621259146,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.512612642393558,0.82554747185289,1.11116716421827,1.50694765603753,0.820165366326151,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,1.73984796469624,0.609958401380546,0.540026704109006,0.209088296014469,0,0.269728692769641,0.247960367176008,0.523511883968059,0,0.621339313086926,0,3.13984746692355,5.46013018508422,2.72231663681667,2.19571699912143,1.35164900392623,1.5256441023948,2.47388331203505,2.83120229949419,1.44950472495604,0.288030006257865,0,1.01362607645082,1.74608627180206,2.20865399062252,0.716106782669926,0.993406773906324,0.480781798079875,0.590758108698309,0.504832249740738,0.685861259894999,0.302478555410522,0.194915761479505,0.481059208201647,0.116876902181569,0,5.10567692760349,6.81825310232015,6.71538465456314,0,0.187682475451182,0.36630324853453,0.643105137237198,0,1.12950368523413,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,1.14166082342594,1.19707462020309,1.02440163452481,1.21553358534147,0.628839487883947,0.367687016900028,0.888986911206461,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.561849044819294,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0,0.950628796921032,2.24456908663095,0.118635018124174,0.591026894253381,0.818462086339379,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Rps8 | |||
}} |
Latest revision as of 05:34, 26 September 2015
Short description: | p3@Rps8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rps8_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_NM_009098, uc008uic.1_5end |
EntrezGene: | Rps8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.93e-07 | 3 |
trophoblast cell | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.19e-10 | 14 |
body cavity | 2.43e-09 | 37 |
body cavity or lining | 2.43e-09 | 37 |
male reproductive organ | 2.68e-09 | 15 |
gonad | 3.27e-09 | 18 |
gonad primordium | 3.27e-09 | 18 |
body cavity precursor | 5.44e-09 | 38 |
anatomical cavity | 1.16e-08 | 39 |
male organism | 1.35e-08 | 16 |
male reproductive system | 1.35e-08 | 16 |
external genitalia | 5.65e-08 | 17 |
indifferent external genitalia | 5.65e-08 | 17 |
indifferent gonad | 5.65e-08 | 17 |
blastocyst | 1.93e-07 | 3 |
blastula | 1.93e-07 | 3 |
cleaving embryo | 1.93e-07 | 3 |