FFCP PHASE1:Mm9::chr4:140980473..140980515,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=19|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:140980473..140980515,-|id=chr4:140980473..140980515,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.60e-10,3;CL:0000737,1.60e-10,3;CL:0000746,1.60e-10,3;CL:0000513,1.60e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.66e-21!18;UBERON:0000948!2.66e-21!18;UBERON:0005498!2.66e-21!18;UBERON:0004140!2.66e-21!18;UBERON:0009881!2.66e-21!18;UBERON:0004141!2.66e-21!18;UBERON:0003084!2.66e-21!18;UBERON:0007005!2.66e-21!18;UBERON:0004139!2.66e-21!18;UBERON:0004291!2.66e-21!18;UBERON:0004535!9.87e-17!23;UBERON:0001009!9.87e-17!23;UBERON:0004872!6.48e-14!33;UBERON:0003103!2.29e-09!43;UBERON:0003914!8.33e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.08e-59,18;UBERON:0000948,2.08e-59,18;UBERON:0005498,2.08e-59,18;UBERON:0004140,2.08e-59,18;UBERON:0009881,2.08e-59,18;UBERON:0004141,2.08e-59,18;UBERON:0003084,2.08e-59,18;UBERON:0007005,2.08e-59,18;UBERON:0004139,2.08e-59,18;UBERON:0004291,2.08e-59,18;UBERON:0004535,9.81e-46,23;UBERON:0001009,9.81e-46,23;UBERON:0004872,2.76e-34,33;UBERON:0003103,2.95e-28,43;UBERON:0003914,5.84e-23,47;UBERON:0003081,5.49e-15,87;UBERON:0000926,7.56e-11,120;UBERON:0004120,7.56e-11,120;UBERON:0006603,7.56e-11,120;UBERON:0010314,7.12e-10,92;UBERON:0001048,2.99e-09,134;UBERON:0004111,2.15e-07,122;UBERON:0000025,3.17e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,2.31533492432352,2.57880095944881,5.15672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.289198713839823,0,1.7794353494215,0.662524555381181,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0,0,0,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,0,0,0,1.24275463521301,2.81431271977315,7.02242039697958,4.02466050494857,4.72234156193769,5.55361606394562,7.20855228726264,10.4626626545851,12.37712629092,7.07607354627966,7.22336841948019,5.26947262048062,8.18719929581861,11.1970558798436,13.9574675510787,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,2.25477175473676,0,0,0,0,0,0,0,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.631790158511746,0,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0,0.532427418478012,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.182927972872773,0,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,1.72159498861959,0.220591419119515,0.695603506861264|short_description=p@chr4:140980473..140980515,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:140980473..140980515,- | |||
|description=CAGE_peak_at_chr4:140980473..140980515,- | |||
|id=chr4:140980473..140980515,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.60e-10,3;CL:0000737,1.60e-10,3;CL:0000746,1.60e-10,3;CL:0000513,1.60e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.66e-21!18;UBERON:0000948!2.66e-21!18;UBERON:0005498!2.66e-21!18;UBERON:0004140!2.66e-21!18;UBERON:0009881!2.66e-21!18;UBERON:0004141!2.66e-21!18;UBERON:0003084!2.66e-21!18;UBERON:0007005!2.66e-21!18;UBERON:0004139!2.66e-21!18;UBERON:0004291!2.66e-21!18;UBERON:0004535!9.87e-17!23;UBERON:0001009!9.87e-17!23;UBERON:0004872!6.48e-14!33;UBERON:0003103!2.29e-09!43;UBERON:0003914!8.33e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.08e-59,18;UBERON:0000948,2.08e-59,18;UBERON:0005498,2.08e-59,18;UBERON:0004140,2.08e-59,18;UBERON:0009881,2.08e-59,18;UBERON:0004141,2.08e-59,18;UBERON:0003084,2.08e-59,18;UBERON:0007005,2.08e-59,18;UBERON:0004139,2.08e-59,18;UBERON:0004291,2.08e-59,18;UBERON:0004535,9.81e-46,23;UBERON:0001009,9.81e-46,23;UBERON:0004872,2.76e-34,33;UBERON:0003103,2.95e-28,43;UBERON:0003914,5.84e-23,47;UBERON:0003081,5.49e-15,87;UBERON:0000926,7.56e-11,120;UBERON:0004120,7.56e-11,120;UBERON:0006603,7.56e-11,120;UBERON:0010314,7.12e-10,92;UBERON:0001048,2.99e-09,134;UBERON:0004111,2.15e-07,122;UBERON:0000025,3.17e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,2.31533492432352,2.57880095944881,5.15672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.289198713839823,0,1.7794353494215,0.662524555381181,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0,0,0,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,0,0,0,1.24275463521301,2.81431271977315,7.02242039697958,4.02466050494857,4.72234156193769,5.55361606394562,7.20855228726264,10.4626626545851,12.37712629092,7.07607354627966,7.22336841948019,5.26947262048062,8.18719929581861,11.1970558798436,13.9574675510787,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,2.25477175473676,0,0,0,0,0,0,0,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.631790158511746,0,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0,0.532427418478012,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.182927972872773,0,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,1.72159498861959,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr4:140980473..140980515,- | |||
}} |
Latest revision as of 02:20, 5 August 2015
Short description: | p@chr4:140980473..140980515, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:140980473..140980515, - |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.60e-10 | 3 |
striated muscle cell | 1.60e-10 | 3 |
cardiac muscle cell | 1.60e-10 | 3 |
cardiac muscle myoblast | 1.60e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.08e-59 | 18 |
heart | 2.08e-59 | 18 |
primitive heart tube | 2.08e-59 | 18 |
primary heart field | 2.08e-59 | 18 |
anterior lateral plate mesoderm | 2.08e-59 | 18 |
heart tube | 2.08e-59 | 18 |
heart primordium | 2.08e-59 | 18 |
cardiac mesoderm | 2.08e-59 | 18 |
cardiogenic plate | 2.08e-59 | 18 |
heart rudiment | 2.08e-59 | 18 |
cardiovascular system | 9.81e-46 | 23 |
circulatory system | 9.81e-46 | 23 |
splanchnic layer of lateral plate mesoderm | 2.76e-34 | 33 |
compound organ | 2.95e-28 | 43 |
epithelial tube | 5.84e-23 | 47 |
lateral plate mesoderm | 5.49e-15 | 87 |
mesoderm | 7.56e-11 | 120 |
mesoderm-derived structure | 7.56e-11 | 120 |
presumptive mesoderm | 7.56e-11 | 120 |
structure with developmental contribution from neural crest | 7.12e-10 | 92 |
primordium | 2.99e-09 | 134 |
anatomical conduit | 2.15e-07 | 122 |
tube | 3.17e-07 | 114 |