FFCP PHASE1:Mm9::chr4:151692678..151692763,-: Difference between revisions
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{{FFCP|EntrezGene=433809|HGNC=|MCL_coexpression_id=19|UniProt=Q3V3A7|association_with_transcript=0bp_to_ENSMUST00000076183,ENSMUST00000123133,ENSMUST00000145311,NM_001033489,uc008waf.2,uc008wag.2,uc012dqb.1_5end|description=CAGE_peak_1_at_Rnf207_5end|id=chr4:151692678..151692763,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,4.92e-07,3;CL:0000359,4.92e-07,3;CL:0002539,4.92e-07,3;CL:0000514,4.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.16e-14!23;UBERON:0001009!1.16e-14!23;UBERON:0007100!1.14e-13!18;UBERON:0000948!1.14e-13!18;UBERON:0005498!1.14e-13!18;UBERON:0004140!1.14e-13!18;UBERON:0009881!1.14e-13!18;UBERON:0004141!1.14e-13!18;UBERON:0003084!1.14e-13!18;UBERON:0007005!1.14e-13!18;UBERON:0004139!1.14e-13!18;UBERON:0004291!1.14e-13!18;UBERON:0005153!2.87e-08!17;UBERON:0004872!5.27e-08!33;UBERON:0002048!4.68e-07!14;UBERON:0000117!4.68e-07!14;UBERON:0000171!4.68e-07!14;UBERON:0000170!4.68e-07!14;UBERON:0005597!4.68e-07!14;UBERON:0000118!4.68e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.51e-31,23;UBERON:0001009,2.51e-31,23;UBERON:0007100,3.97e-29,18;UBERON:0000948,3.97e-29,18;UBERON:0005498,3.97e-29,18;UBERON:0004140,3.97e-29,18;UBERON:0009881,3.97e-29,18;UBERON:0004141,3.97e-29,18;UBERON:0003084,3.97e-29,18;UBERON:0007005,3.97e-29,18;UBERON:0004139,3.97e-29,18;UBERON:0004291,3.97e-29,18;UBERON:0004872,3.08e-20,33;UBERON:0003914,1.10e-12,47;UBERON:0003103,3.96e-11,43;UBERON:0001048,2.23e-08,134;UBERON:0001135,4.92e-07,3;UBERON:0004237,4.92e-07,3;UBERON:0004695,4.92e-07,3;UBERON:0002111,4.92e-07,3;UBERON:0004178,4.92e-07,3;UBERON:0000025,5.63e-07,114;UBERON:0004111,7.80e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,5.47435428585379,6.05704282133549,0,0,0,0,0.139986421625363,0,0,0,0,0,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,1.70430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,2.73574412652416,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,2.32833033665114,0.215567992932842,0,0,0,0,0,0,0.59710280045548,0,0,0,12.2204205795946,15.7132460187334,14.4049649168812,31.9605393040034,38.3690251907437,37.1783742058582,54.6454770163458,46.9478452449334,64.5712343290447,60.2289050683338,78.3078803657284,58.1263364443786,69.1525940521822,43.470922827628,44.1539117721623,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,1.59313018603494,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,1.89491411770485,0.488894929326078,0.678980343100753,0,1.50755631697634,1.6663054862021,0.390267295715598,1.26108115284953,0.8858587585951,0.956728611944923,0.655453258862952,1.03610989119537,1.01254341007058,0,0,3.44234991113325,0.827810238914197,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,2.21225730555071,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,0,0,2.0932316446157,0.992750942742586,2.13896307178452,0.258319646955462,1.18269287843545,2.22978753426933,1.3020438484395,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0.596044064343795,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,5.40930863290133,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0,0.666740183404846,0.412070114477788,0.64183841918363,1.01078884705519,0,0.565879024158229,0.280924522409647,0.832326981263301,0.631790158511746,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0,1.16965804222704,1.07435527024149,0,0.441182838239031,0|short_description=p1@Rnf207}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433809 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V3A7 | |||
|association_with_transcript=0bp_to_ENSMUST00000076183,ENSMUST00000123133,ENSMUST00000145311,NM_001033489,uc008waf.2,uc008wag.2,uc012dqb.1_5end | |||
|cluster_id=chr4:151692678..151692763,- | |||
|description=CAGE_peak_1_at_Rnf207_5end | |||
|id=chr4:151692678..151692763,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.92e-07,3;CL:0000359,4.92e-07,3;CL:0002539,4.92e-07,3;CL:0000514,4.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.16e-14!23;UBERON:0001009!1.16e-14!23;UBERON:0007100!1.14e-13!18;UBERON:0000948!1.14e-13!18;UBERON:0005498!1.14e-13!18;UBERON:0004140!1.14e-13!18;UBERON:0009881!1.14e-13!18;UBERON:0004141!1.14e-13!18;UBERON:0003084!1.14e-13!18;UBERON:0007005!1.14e-13!18;UBERON:0004139!1.14e-13!18;UBERON:0004291!1.14e-13!18;UBERON:0005153!2.87e-08!17;UBERON:0004872!5.27e-08!33;UBERON:0002048!4.68e-07!14;UBERON:0000117!4.68e-07!14;UBERON:0000171!4.68e-07!14;UBERON:0000170!4.68e-07!14;UBERON:0005597!4.68e-07!14;UBERON:0000118!4.68e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.51e-31,23;UBERON:0001009,2.51e-31,23;UBERON:0007100,3.97e-29,18;UBERON:0000948,3.97e-29,18;UBERON:0005498,3.97e-29,18;UBERON:0004140,3.97e-29,18;UBERON:0009881,3.97e-29,18;UBERON:0004141,3.97e-29,18;UBERON:0003084,3.97e-29,18;UBERON:0007005,3.97e-29,18;UBERON:0004139,3.97e-29,18;UBERON:0004291,3.97e-29,18;UBERON:0004872,3.08e-20,33;UBERON:0003914,1.10e-12,47;UBERON:0003103,3.96e-11,43;UBERON:0001048,2.23e-08,134;UBERON:0001135,4.92e-07,3;UBERON:0004237,4.92e-07,3;UBERON:0004695,4.92e-07,3;UBERON:0002111,4.92e-07,3;UBERON:0004178,4.92e-07,3;UBERON:0000025,5.63e-07,114;UBERON:0004111,7.80e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,5.47435428585379,6.05704282133549,0,0,0,0,0.139986421625363,0,0,0,0,0,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,1.70430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,2.73574412652416,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,2.32833033665114,0.215567992932842,0,0,0,0,0,0,0.59710280045548,0,0,0,12.2204205795946,15.7132460187334,14.4049649168812,31.9605393040034,38.3690251907437,37.1783742058582,54.6454770163458,46.9478452449334,64.5712343290447,60.2289050683338,78.3078803657284,58.1263364443786,69.1525940521822,43.470922827628,44.1539117721623,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,1.59313018603494,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,1.89491411770485,0.488894929326078,0.678980343100753,0,1.50755631697634,1.6663054862021,0.390267295715598,1.26108115284953,0.8858587585951,0.956728611944923,0.655453258862952,1.03610989119537,1.01254341007058,0,0,3.44234991113325,0.827810238914197,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,2.21225730555071,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,0,0,2.0932316446157,0.992750942742586,2.13896307178452,0.258319646955462,1.18269287843545,2.22978753426933,1.3020438484395,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0.596044064343795,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,5.40930863290133,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0,0.666740183404846,0.412070114477788,0.64183841918363,1.01078884705519,0,0.565879024158229,0.280924522409647,0.832326981263301,0.631790158511746,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0,1.16965804222704,1.07435527024149,0,0.441182838239031,0 | |||
|short_description=p1@Rnf207 | |||
}} |
Latest revision as of 19:04, 26 September 2015
Short description: | p1@Rnf207 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf207_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000076183, ENSMUST00000123133, ENSMUST00000145311, NM_001033489, uc008waf.2, uc008wag.2, uc012dqb.1_5end |
EntrezGene: | Rnf207 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.92e-07 | 3 |
vascular associated smooth muscle cell | 4.92e-07 | 3 |
aortic smooth muscle cell | 4.92e-07 | 3 |
smooth muscle myoblast | 4.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.51e-31 | 23 |
circulatory system | 2.51e-31 | 23 |
primary circulatory organ | 3.97e-29 | 18 |
heart | 3.97e-29 | 18 |
primitive heart tube | 3.97e-29 | 18 |
primary heart field | 3.97e-29 | 18 |
anterior lateral plate mesoderm | 3.97e-29 | 18 |
heart tube | 3.97e-29 | 18 |
heart primordium | 3.97e-29 | 18 |
cardiac mesoderm | 3.97e-29 | 18 |
cardiogenic plate | 3.97e-29 | 18 |
heart rudiment | 3.97e-29 | 18 |
splanchnic layer of lateral plate mesoderm | 3.08e-20 | 33 |
epithelial tube | 1.10e-12 | 47 |
compound organ | 3.96e-11 | 43 |
primordium | 2.23e-08 | 134 |
smooth muscle tissue | 4.92e-07 | 3 |
blood vessel smooth muscle | 4.92e-07 | 3 |
arterial system smooth muscle | 4.92e-07 | 3 |
artery smooth muscle tissue | 4.92e-07 | 3 |
aorta smooth muscle tissue | 4.92e-07 | 3 |
tube | 5.63e-07 | 114 |
anatomical conduit | 7.80e-07 | 122 |