FFCP PHASE1:Mm9::chr5:122908492..122908510,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=10|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:122908492..122908510,-|id=chr5:122908492..122908510,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,2.45e-08,3;CL:0000737,2.45e-08,3;CL:0000746,2.45e-08,3;CL:0000513,2.45e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.28e-12!114;UBERON:0007100!1.15e-10!18;UBERON:0000948!1.15e-10!18;UBERON:0005498!1.15e-10!18;UBERON:0004140!1.15e-10!18;UBERON:0009881!1.15e-10!18;UBERON:0004141!1.15e-10!18;UBERON:0003084!1.15e-10!18;UBERON:0007005!1.15e-10!18;UBERON:0004139!1.15e-10!18;UBERON:0004291!1.15e-10!18;UBERON:0004111!2.66e-10!122;UBERON:0004535!1.47e-09!23;UBERON:0001009!1.47e-09!23;UBERON:0003103!2.70e-08!43;UBERON:0003914!8.60e-07!47;UBERON:0004872!9.19e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.78e-46,18;UBERON:0000948,9.78e-46,18;UBERON:0005498,9.78e-46,18;UBERON:0004140,9.78e-46,18;UBERON:0009881,9.78e-46,18;UBERON:0004141,9.78e-46,18;UBERON:0003084,9.78e-46,18;UBERON:0007005,9.78e-46,18;UBERON:0004139,9.78e-46,18;UBERON:0004291,9.78e-46,18;UBERON:0004535,1.57e-35,23;UBERON:0001009,1.57e-35,23;UBERON:0004872,2.25e-24,33;UBERON:0003914,4.37e-23,47;UBERON:0003103,2.17e-18,43;UBERON:0000025,1.48e-08,114;UBERON:0003081,2.47e-08,87;UBERON:0004111,7.08e-08,122;UBERON:0010314,8.56e-08,92;UBERON:0001048,5.23e-07,134|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.405507724878058,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,1.02903774414379,0,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.638436690425939,0.768032666281217,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,1.94932925234301,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,0,0,0.125654352112864,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0,0,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,0.946978942340841,0,0.925602677324269,1.39520366850245,0.536546802799238,1.86824547787471,1.48103864922132,3.94001913789829,2.35099547682982,4.67839959761063,5.70830299756732,4.02619256281115,0.210289948564127,0,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,0.169978429993855,0,0.138199973804424,1.90934123603023,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0.549454872801795,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.468207537349412,0,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p@chr5:122908492..122908510,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:122908492..122908510,- | |||
|description=CAGE_peak_at_chr5:122908492..122908510,- | |||
|id=chr5:122908492..122908510,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.45e-08,3;CL:0000737,2.45e-08,3;CL:0000746,2.45e-08,3;CL:0000513,2.45e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.28e-12!114;UBERON:0007100!1.15e-10!18;UBERON:0000948!1.15e-10!18;UBERON:0005498!1.15e-10!18;UBERON:0004140!1.15e-10!18;UBERON:0009881!1.15e-10!18;UBERON:0004141!1.15e-10!18;UBERON:0003084!1.15e-10!18;UBERON:0007005!1.15e-10!18;UBERON:0004139!1.15e-10!18;UBERON:0004291!1.15e-10!18;UBERON:0004111!2.66e-10!122;UBERON:0004535!1.47e-09!23;UBERON:0001009!1.47e-09!23;UBERON:0003103!2.70e-08!43;UBERON:0003914!8.60e-07!47;UBERON:0004872!9.19e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.78e-46,18;UBERON:0000948,9.78e-46,18;UBERON:0005498,9.78e-46,18;UBERON:0004140,9.78e-46,18;UBERON:0009881,9.78e-46,18;UBERON:0004141,9.78e-46,18;UBERON:0003084,9.78e-46,18;UBERON:0007005,9.78e-46,18;UBERON:0004139,9.78e-46,18;UBERON:0004291,9.78e-46,18;UBERON:0004535,1.57e-35,23;UBERON:0001009,1.57e-35,23;UBERON:0004872,2.25e-24,33;UBERON:0003914,4.37e-23,47;UBERON:0003103,2.17e-18,43;UBERON:0000025,1.48e-08,114;UBERON:0003081,2.47e-08,87;UBERON:0004111,7.08e-08,122;UBERON:0010314,8.56e-08,92;UBERON:0001048,5.23e-07,134 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.405507724878058,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,1.02903774414379,0,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.638436690425939,0.768032666281217,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,1.94932925234301,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,0,0,0.125654352112864,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0,0,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,0.946978942340841,0,0.925602677324269,1.39520366850245,0.536546802799238,1.86824547787471,1.48103864922132,3.94001913789829,2.35099547682982,4.67839959761063,5.70830299756732,4.02619256281115,0.210289948564127,0,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,0.169978429993855,0,0.138199973804424,1.90934123603023,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0.549454872801795,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.468207537349412,0,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr5:122908492..122908510,- | |||
}} |
Latest revision as of 05:49, 6 August 2015
Short description: | p@chr5:122908492..122908510, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:122908492..122908510, - |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.45e-08 | 3 |
striated muscle cell | 2.45e-08 | 3 |
cardiac muscle cell | 2.45e-08 | 3 |
cardiac muscle myoblast | 2.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.78e-46 | 18 |
heart | 9.78e-46 | 18 |
primitive heart tube | 9.78e-46 | 18 |
primary heart field | 9.78e-46 | 18 |
anterior lateral plate mesoderm | 9.78e-46 | 18 |
heart tube | 9.78e-46 | 18 |
heart primordium | 9.78e-46 | 18 |
cardiac mesoderm | 9.78e-46 | 18 |
cardiogenic plate | 9.78e-46 | 18 |
heart rudiment | 9.78e-46 | 18 |
cardiovascular system | 1.57e-35 | 23 |
circulatory system | 1.57e-35 | 23 |
splanchnic layer of lateral plate mesoderm | 2.25e-24 | 33 |
epithelial tube | 4.37e-23 | 47 |
compound organ | 2.17e-18 | 43 |
tube | 1.48e-08 | 114 |
lateral plate mesoderm | 2.47e-08 | 87 |
anatomical conduit | 7.08e-08 | 122 |
structure with developmental contribution from neural crest | 8.56e-08 | 92 |
primordium | 5.23e-07 | 134 |