FFCP PHASE1:Hg19::chr9:114393412..114393430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=23369 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JVP1 | |||
|association_with_transcript=138bp_to_ENST00000374304,uc004bfk.3_5end | |||
|cluster_id=chr9:114393412..114393430,- | |||
|description=CAGE_peak_2_at_C9orf29_5end | |||
|id=chr9:114393412..114393430,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.54e-07;2!CL:0000669;2.08e-07;4!CL:1000746;5.12e-07;7!CL:1000612;5.12e-07;7!CL:0000650;9.78e-07;2!CL:1000500;9.78e-07;2!CL:1000618;9.78e-07;2!CL:1001318;9.78e-07;2!CL:0000575;9.78e-07;2!CL:0002173;9.78e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.57e-07,2;CL:0000008,1.57e-07,2;CL:0000669,2.36e-07,4;CL:1000746,5.11e-07,7;CL:1000612,5.11e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000008;1.54e-07;2!UBERON:0010122;9.78e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.08e-15!365;UBERON:0000481!8.98e-13!347;UBERON:0005743!4.04e-10!86;UBERON:0003075!5.23e-10!86;UBERON:0007284!5.23e-10!86;UBERON:0000119!6.44e-10!312;UBERON:0000033!8.19e-10!123;UBERON:0002346!9.64e-10!90;UBERON:0003056!1.05e-09!61;UBERON:0000483!1.19e-09!309;UBERON:0001017!4.29e-09!82;UBERON:0000153!9.88e-09!129;UBERON:0007811!9.88e-09!129;UBERON:0000073!1.04e-08!94;UBERON:0001016!1.04e-08!94;UBERON:0000955!2.31e-08!69;UBERON:0006238!2.31e-08!69;UBERON:0004121!8.35e-08!169;UBERON:0000924!9.73e-08!173;UBERON:0006601!9.73e-08!173;UBERON:0001049!1.04e-07!57;UBERON:0005068!1.04e-07!57;UBERON:0006241!1.04e-07!57;UBERON:0007135!1.04e-07!57;UBERON:0002616!1.33e-07!59;UBERON:0000477!1.89e-07!286;UBERON:0000064!3.91e-07!219;UBERON:0002104!4.80e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.34e-12;4!UBERON:0000964;1.34e-12;4!UBERON:0010409;1.34e-12;4!UBERON:0005383;2.74e-09;3!UBERON:0005382;2.74e-09;3!UBERON:0003566;1.54e-07;2!UBERON:0001777;1.54e-07;2!UBERON:0000369;4.63e-07;4!UBERON:0002435;4.63e-07;4!UBERON:0000204;4.63e-07;4!UBERON:0000074;5.12e-07;7!UBERON:0001229;5.12e-07;7!UBERON:0003126;9.22e-07;7!UBERON:0001005;9.22e-07;7!UBERON:0001873;9.78e-07;2!UBERON:0003567;9.78e-07;2!UBERON:0003838;9.78e-07;2!UBERON:0003586;9.78e-07;2!UBERON:0005169;9.78e-07;2!UBERON:0002321;9.78e-07;2!UBERON:0005215;9.78e-07;2!UBERON:0002303;9.78e-07;2!UBERON:0002319;9.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,1.47e-12,4;UBERON:0000964,3.16e-12,4;UBERON:0010409,3.16e-12,4;UBERON:0004348,3.16e-12,4;UBERON:0005427,3.16e-12,4;UBERON:0005383,6.62e-10,3;UBERON:0005382,6.62e-10,3;UBERON:0003056,2.73e-08,61;UBERON:0003566,1.57e-07,2;UBERON:0001777,1.57e-07,2;UBERON:0000369,1.62e-07,4;UBERON:0002435,1.62e-07,4;UBERON:0000204,1.62e-07,4;UBERON:0010082,1.62e-07,4;UBERON:0001873,4.07e-07,2;UBERON:0010122,4.07e-07,2;UBERON:0010532,5.11e-07,7;UBERON:0000074,5.11e-07,7;UBERON:0001229,5.11e-07,7;UBERON:0001230,5.11e-07,7;UBERON:0003220,5.11e-07,7;UBERON:0005749,5.11e-07,7;UBERON:0004199,5.11e-07,7;UBERON:0004209,5.11e-07,7;UBERON:0004198,5.11e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.783556884599516,0,1.39560233594486,0,0,0.618831764800233,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0.861847406537515,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0.30120591877825,1.47901604066715,0.232401601740905,0.568676929949686,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0,0.289648807765598,0,0,0.383587685530591,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.654895377488563,1.09288586487763,1.11235332835329,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0,0.417989933073621,0,0.35576626268671,0,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0,0,0.560677600142307,1.06748995729705,0.24666754841716,1.24484414159907,0.269421344139376,0.163461903113459,0.454072282934794,0.576175924479999,2.57753575017176,0.312160076830321,0.570471821544449,0.149448680551801,0.822041490506354,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.929932030581889,0,0,0.910161361938026,1.43723628363248,0.168336113954066,0.625592599359821,0.554128230968366,1.31693286264251,0,0.300476117813194,0.226864366320042,0,0.427114777637135,0.423863802319124,0.600182192168805,0.824420233907511,0.257640540045629,0.558350568994769,0.168776332241266,0.292311015483596,0.252433774244115,0.552299391853796,1.13152239773168,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0.286804595389004,0.121973706129595,0.530119073285941,0.929551542956147,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,3.60939740834793,0.236613600079688,0,0.482022059766964,0.441175890929576,0.871517776369625,0,0,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0.491953754172454,0.857839051492628,0.439001141634502,0,0.603173834469785,0.462942225792648,2.93227474779292,2.07986957055916,0,0.927443239800615,0.469634776943287,1.15493158208859,0,0.190254152234598,2.37061319387782,0,0,0,0,0,0,0.141775097242386,0.806026704325635,0.290633938513962,0,0,0.264145302039678,0,0.144119953416961,0,1.39695367442772,0.381988425558278,3.51652341630141,1.71072446022705,0.102827492703324,0.600686115687835,0.285826432630578,0.672786506072164,0.43596006883328,0.07333828582095,0.129271715757778,3.57656445851882,0,1.06375246633948,1.04007436911366,1.02882949704857,0,1.0656887160644,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0.336255431980582,0,0.215627574859517,0.128343036279748,1.01637849688985,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,1.10422342547226,1.50051156317903,0.542530047399471,0,0.178428988797162,0,0.585707074963566,0.601892199455438,0,0,0,0.184369168541703,0.521301686808497,3.13281851940385,0.686286847621712,0,0,0,0.303127571446259,0,1.20956117331872,0.496215615637554,0,0.561320188866147,0.512556597022804,0,0.482561763430822,0,0,0.532685175939381,0.328508624055237,0,0.116210378459959,0.241718899183244,0.200506470303285,0.368323955743585,0.459257792658427,0.182091168006717,0.393373244878272,0,0.385076685522074,1.56869953835371,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,1.08378575017541,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.656029291399411,1.62689197332152,0.206082023295445,0.457847324091717,0.330037999682352,0.574265537996172,0.650060246036521,1.6068392984416,0.386682873168488,0.308097234229289,0.460511024178389,0,0.966782203814463,0.870100163485371,0.170453254832202,0,0.661139661443912,0.384380134730212,0.255225424989168,0.2023155617111,0,0.62962469366128,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0.858749320451947,0.372158369359667,0.949138274156178,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0,0,0.589062011728432,0.202182481573316,3.17020642346017,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,1.73632660280006,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0.392996164052485,0,1.41904425628239,0.844430541190656,0.658589785919804,0.379473173765715,0.699869440489966,0.577332676353072,1.34060455107157,1.08890984861323,0.753150406214233,1.29151611801369,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0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| |||
|short_description=p2@C9orf29 | |||
}} |
Latest revision as of 04:57, 20 September 2015
Short description: | p2@C9orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf29_5end |
Coexpression cluster: | NA |
Association with transcript: | 138bp_to_ENST00000374304, uc004bfk.3_5end |
EntrezGene: | NA |
HGNC: | 23369 |
UniProt: | Q5JVP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.57e-07 | 2 |
migratory cranial neural crest cell | 1.57e-07 | 2 |
pericyte cell | 2.36e-07 | 4 |
glomerular cell | 5.11e-07 | 7 |
kidney corpuscule cell | 5.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
stroma | 1.47e-12 | 4 |
cornea | 3.16e-12 | 4 |
eye surface | 3.16e-12 | 4 |
optic eminence | 3.16e-12 | 4 |
corneal primordium | 3.16e-12 | 4 |
caudate-putamen | 6.62e-10 | 3 |
dorsal striatum | 6.62e-10 | 3 |
pre-chordal neural plate | 2.73e-08 | 61 |
head connective tissue | 1.57e-07 | 2 |
substantia propria of cornea | 1.57e-07 | 2 |
corpus striatum | 1.62e-07 | 4 |
striatum | 1.62e-07 | 4 |
ventral part of telencephalon | 1.62e-07 | 4 |
future corpus striatum | 1.62e-07 | 4 |
caudate nucleus | 4.07e-07 | 2 |
future caudate nucleus | 4.07e-07 | 2 |
primitive nephron | 5.11e-07 | 7 |
renal glomerulus | 5.11e-07 | 7 |
renal corpuscle | 5.11e-07 | 7 |
glomerular capsule | 5.11e-07 | 7 |
metanephric mesenchyme | 5.11e-07 | 7 |
glomerular tuft | 5.11e-07 | 7 |
S-shaped body | 5.11e-07 | 7 |
renal vesicle | 5.11e-07 | 7 |
comma-shaped body | 5.11e-07 | 7 |