FF:12338-130I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005927 | ||
|accession_numbers=CAGE;DRX008905;DRR009779;DRZ001204;DRZ002587;DRZ012554;DRZ013937 | |||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor=biol_rep1 | |||
|expression_enrichment_score=chr15:102828658..102828678,+!p1@Hoxc6!1.89!75.84!Hoxc6;;chr19:5447886..5447905,+!p1@Fosl1!1.84!67.83!Fosl1;;chr6:52190467..52190500,-!p1@Hoxa10!1.66!44.65!Hoxa10;;chr2:30700881..30700916,+!p1@Prrx2!1.63!76.86!Prrx2;;chr3:99057269..99057306,+!p1@Tbx15!1.62!48.57!Tbx15;;chr12:74147689..74147711,-!p1@Six1!1.59!81.64!Six1;;chr16:14705925..14705951,+!p1@Snai2!1.57!244.40!Snai2;;chr15:102797288..102797302,+!p1@Hoxc10!1.53!32.72!Hoxc10;;chr16:14705961..14705978,+!p2@Snai2!1.51!139.92!Snai2;;chr17:44951553..44951586,-!p2@Runx2!1.51!34.77!Runx2;;chr2:30700857..30700873,+!p3@Prrx2!1.48!39.71!Prrx2;;chr15:102751603..102751630,+!p1@Hoxc13!1.48!29.48!Hoxc13;;chr19:5447692..5447711,+!p2@Fosl1!1.44!26.76!Fosl1;;chr15:102797225..102797243,+!p2@Hoxc10!1.42!25.22!Hoxc10;;chr15:102751578..102751600,+!p2@Hoxc13!1.40!24.20!Hoxc13;;chr6:52176164..52176195,-!p1@Hoxa9!1.36!26.93!Hoxa9;;chr6:6831950..6831985,-!p2@Dlx5!1.36!24.03!Dlx5;;chr2:152758901..152758925,-!p1@Foxs1!1.31!85.04!Foxs1;;chr13:99124189..99124205,+!p1@Foxd1!1.31!29.65!Foxd1;;chr6:83661226..83661282,+!p1@Vax2!1.31!19.60!Vax2;;chr6:6831986..6832007,-!p4@Dlx5!1.29!18.41!Dlx5;;chr15:102797170..102797182,+!p3@Hoxc10!1.21!15.34!Hoxc10;;chr13:31898637..31898653,+!p2@Foxc1!1.20!26.42!Foxc1;;chr13:55932591..55932622,-!p1@Pitx1!1.20!17.72!Pitx1;;chr7:52071956..52071978,-!p1@Atf5!1.19!455.05!Atf5;;chr13:31898729..31898761,+!p1@Foxc1!1.19!35.45!Foxc1;;chr1:165243792..165243808,-!p1@Prrx1!1.18!48.74!Prrx1;;chr8:94881733..94881790,+!p1@Irx5!1.16!26.59!Irx5;;chr1:140739014..140739032,-!p1@Lhx9!1.11!15.00!Lhx9;;chr15:102751552..102751563,+!p3@Hoxc13!1.11!11.93!Hoxc13;;chr15:97738692..97738747,-!p1@Vdr!1.10!63.40!Vdr;;chr13:72766250..72766273,+!p1@Irx2!1.07!16.53!Irx2;;chr6:6832076..6832092,-!p1@Dlx5!1.06!12.27!Dlx5;;chr13:55932624..55932641,-!p2@Pitx1!1.06!10.40!Pitx1;;chr9:87626083..87626108,-!p1@Tbx18!1.05!22.84!Tbx18;;chr10:67000609..67000625,+!p1@Egr2!1.03!22.84!Egr2;;chr13:31898496..31898519,+!p3@Foxc1!1.02!15.51!Foxc1;;chr15:102839948..102839975,+!p3@Hoxc6!1.00!9.03!Hoxc6;;chr9:87625971..87625992,-!p2@Tbx18!0.99!8.86!Tbx18;;chr15:102828642..102828653,+!p2@Hoxc6!0.98!8.52!Hoxc6;;chr16:14705668..14705683,+!p3@Snai2!0.98!8.52!Snai2;;chr15:102087737..102087801,-!p3@Rarg!0.95!13.46!Rarg;;chr16:14705746..14705761,+!p4@Snai2!0.95!8.01!Snai2;;chr3:66785181..66785199,-!p2@Shox2!0.95!7.84!Shox2;;chr10:67375368..67375433,-!p1@Zfp365!0.93!13.63!Zfp365;;chr6:52163319..52163342,-!p1@Hoxa3!0.93!11.08!Hoxa3;;chr12:34642682..34642753,+!p2@Twist1!0.91!19.60!Twist1;;chr13:31717548..31717596,+!p1@Foxf2!0.91!14.49!Foxf2;;chr6:72185210..72185228,-!p3@Atoh8!0.90!12.10!Atoh8;;chr15:102797183..102797205,+!p4@Hoxc10!0.90!6.99!Hoxc10;;chr4:134676555..134676575,+!p2@Runx3!0.89!6.82!Runx3;;chr6:52190668..52190682,-!p3@Hoxa10!0.88!6.65!Hoxa10;;chr6:72185232..72185272,-!p1@Atoh8!0.87!19.26!Atoh8;;chr13:55932739..55932756,-!p5@Pitx1!0.87!6.48!Pitx1;;chr15:102076870..102076941,-!p1@Rarg!0.86!72.60!Rarg;;chr11:44430812..44430838,+!p1@Ebf1!0.86!65.10!Ebf1;;chr9:96653072..96653154,-!p1@Zbtb38!0.86!17.38!Zbtb38;;chr8:94325321..94325366,-!p1@Irx3!0.86!15.85!Irx3;;chr1:186556375..186556404,-!p3@Hlx!0.86!11.59!Hlx;;chr2:30700788..30700824,+!p2@Prrx2!0.86!9.88!Prrx2;;chr1:165243591..165243625,-!p2@Prrx1!0.84!9.20!Prrx1;;chr8:123640063..123640077,+!p1@Foxc2!0.83!10.91!Foxc2;;chr3:66785857..66785873,-!p1@Shox2!0.83!5.79!Shox2;;chr3:66785201..66785226,-!p3@Shox2!0.82!5.62!Shox2;;chr11:96153767..96153822,+!p1@Hoxb6!0.81!8.69!Hoxb6;;chr10:80889867..80889924,-!p1@Nfic!0.80!161.06!Nfic;;chr3:99057256..99057268,+!p3@Tbx15!0.80!5.28!Tbx15;;chr2:167363692..167363710,+!p1@Snai1!0.79!68.00!Snai1;;chr15:102820964..102821006,+!p1@Hoxc8!0.79!5.11!Hoxc8;;chr6:52184901..52184959,-!p2@Hoxa10!0.79!5.11!Hoxa10;;chr3:5218629..5218684,+!p1@Zfhx4!0.78!17.72!Zfhx4;;chr1:57029281..57029326,-!p1@Satb2!0.78!8.18!Satb2;;chr2:152758938..152758954,-!p2@Foxs1!0.77!6.99!Foxs1;;chr6:52176144..52176161,-!p2@Hoxa9!0.77!4.94!Hoxa9;;chr17:44951431..44951445,-!p3@Runx2!0.76!4.77!Runx2;;chr19:55816546..55816556,+!p3@Tcf7l2!0.75!19.26!Tcf7l2;;chr12:9581262..9581282,+!p1@Osr1!0.74!60.33!Osr1;;chr12:86940338..86940357,+!p1@Jdp2!0.73!47.72!Jdp2;;chr19:28754692..28754757,-!p1@Glis3!0.73!20.11!Glis3;;chr15:102087880..102087927,-!p2@Rarg!0.73!10.74!Rarg;;chr1:57028538..57028553,-!p6@Satb2!0.73!4.43!Satb2;;chr1:165243379..165243402,-!p3@Prrx1!0.72!6.65!Prrx1;;chr11:94981424..94981439,+!p1@Dlx3!0.72!4.94!Dlx3;;chr16:92697560..92697592,-!p2@Runx1!0.71!28.80!Runx1;;chr16:43363152..43363186,+!p3@Zbtb20!0.71!10.23!Zbtb20;;chr13:31898529..31898542,+!p5@Foxc1!0.71!5.11!Foxc1;;chr8:94325814..94325839,-!p2@Irx3!0.70!9.03!Irx3;;chr5:53981592..53981616,+!p3@Rbpj!0.70!8.18!Rbpj;;chr13:72101178..72101203,-!p1@Irx1!0.70!6.65!Irx1;;chr7:144506077..144506128,-!p1@Ebf3!0.69!9.88!Ebf3;;chr12:9581284..9581303,+!p2@Osr1!0.69!8.01!Osr1;;chr15:102839976..102839989,+!p4@Hoxc6!0.69!3.92!Hoxc6;;chr1:186556410..186556424,-!p1@Hlx!0.68!13.29!Hlx;;chr12:958131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Nr1h2;;chr12:41172341..41172385,-!p1@Zfp277!0.09!38.01!Zfp277;;chr17:32967140..32967197,-!p1@Zfp799!0.09!14.66!Zfp799;;chr10:57206160..57206220,+!p1@Hsf2!0.09!11.42!Hsf2;;chr15:75771454..75771521,+!p1@Zfp623!0.09!9.54!Zfp623;;chr17:28369668..28369734,+!p1@Ppard!0.09!9.37!Ppard;;chr9:20385951..20386032,+!p1@Zfp846!0.09!8.35!Zfp846;;chr2:126501197..126501245,-!p1@Gabpb1!0.09!7.84!Gabpb1;;chr7:5003117..5003159,+!p1@Zfp580!0.09!7.67!Zfp580;;chr7:11080671..11080750,-!p1@Zik1!0.09!6.99!Zik1;;chr4:133801494..133801519,-!p2@Zfp593!0.09!6.99!Zfp593;;chr8:118230866..118230891,-!p4@Maf!0.09!6.48!Maf;;chr17:35031460..35031518,+!p1@Zbtb12!0.09!4.77!Zbtb12;;chr19:5610038..5610066,-!p1@Kat5!0.09!4.60!Kat5;;chr13:67209482..67209545,-!p1@Zfp708!0.09!4.43!Zfp708;;chr2:72817659..72817725,-!p5@Sp3!0.09!3.92!Sp3;;chr17:45570488..45570510,-!p3@Cdc5l!0.09!3.07!Cdc5l;;chr3:89197057..89197114,-!p1@Zbtb7b!0.09!2.90!Zbtb7b;;chr11:74644716..74644780,+!p2@Mnt!0.09!2.56!Mnt;;chr7:134169741..134169760,-!p10@Maz!0.09!2.56!Maz;;chr17:71202822..71202877,-!p3@Tgif1!0.09!2.39!Tgif1;;chr2:91077124..91077146,-!p3@Ddb2!0.09!2.05!Ddb2;;chr15:76181718..76181729,+!p3@Maf1!0.09!1.87!Maf1;;chr7:134519511..134519534,-!p2@Zfp747!0.09!1.19!Zfp747;;chr1:95651267..95651284,-!p4@Thap4!0.09!1.19!Thap4;;chr19:55817590..55817625,+!p11@Tcf7l2!0.09!0.85!Tcf7l2;;chr1:64167765..64167777,-!p6@Klf7!0.09!0.68!Klf7;;chr12:39507404..39507441,+!p4@Etv1!0.09!0.68!Etv1;;chr12:77470718..77470752,-!p4@Zbtb25!0.09!0.68!Zbtb25;;chr8:118230847..118230856,-!p8@Maf!0.09!0.68!Maf;;chr9:69137648..69137656,+!p5@Rora!0.09!0.68!Rora;;chr9:20385789..20385803,+!p5@Zfp846!0.09!0.51!Zfp846;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.09!0.51!Zfhx3;;chr13:30077917..30077928,-!p4@E2f3!0.09!0.51!E2f3;;chr15:79178029..79178044,+!p4@Maff!0.09!0.51!Maff;;chr15:81633224..81633235,+!p5@Tef!0.09!0.51!Tef;;chr10:107769219..107769226,+!p5@Pawr!0.09!0.51!Pawr;;chr14:22806778..22806795,-!p5@Zfp503!0.09!0.34!Zfp503;;chr11:98603185..98603208,+!p1@Thra!0.08!65.96!Thra;;chr19:55816300..55816332,+!p1@Tcf7l2!0.08!50.79!Tcf7l2;;chr5:138187195..138187255,+!p1@Tsc22d4!0.08!46.36!Tsc22d4;;chr7:119822841..119822887,+!p1@Tead1!0.08!34.09!Tead1;;chr2:27532754..27532815,+!p1@Rxra!0.08!31.36!Rxra;;chr1:172797892..172797915,-!p1@Atf6!0.08!30.17!Atf6;;chr2:31428295..31428361,+!p1@Fubp3!0.08!28.29!Fubp3;;chr17:28487692..28487765,-!p1@Tead3!0.08!20.96!Tead3;;chr13:53076396..53076452,-!p1@Nfil3!0.08!18.92!Nfil3;;chr9:19426523..19426584,+!p1@Zfp317!0.08!15.34!Zfp317;;chr8:27268658..27268724,+!p1@Thap1!0.08!12.44!Thap1;;chr2:154395581..154395610,-!p1@E2f1!0.08!10.40!E2f1;;chr11:101413151..101413207,-!p1@Brca1!0.08!9.88!Brca1;;chr4:97444012..97444045,+!p4@Nfia!0.08!7.50!Nfia;;chr17:45570660..45570694,-!p1@Cdc5l!0.08!6.65!Cdc5l;;chr14:65977498..65977528,+!p1@Zfp395!0.08!6.48!Zfp395;;chr4:118967125..118967143,-!p2@Ybx1!0.08!6.14!Ybx1;;chr6:124959683..124959735,+!p2@Zfp384!0.08!5.62!Zfp384;;chr1:138521528..138521572,+!p1@Zfp281!0.08!5.62!Zfp281;;chr2:44965593..44965624,-!p3@Zeb2!0.08!5.28!Zeb2;;chrX:108810678..108810736,-!p1@Hdx!0.08!2.90!Hdx;;chr8:107694596..107694619,+!p4@Cbfb!0.08!2.39!Cbfb;;chr17:22362583..22362606,-!p1@Gm4944!0.08!2.39!Gm4944;;chr8:111227738..111227793,+!p@chr8:111227738..111227793,+!0.08!1.87!Zfhx3;;chr10:93610727..93610754,+!p2@Nr2c1!0.08!1.87!Nr2c1;;chr12:85658041..85658051,+!p3@Zfp410!0.08!1.70!Zfp410;;chr16:4559721..4559747,-!p3@Tfap4!0.08!1.53!Tfap4;;chr13:59924354..59924366,-!p3@Zcchc6!0.08!1.19!Zcchc6;;chr13:96095097..96095114,+!p5@Zbed3!0.08!1.02!Zbed3;;chr7:4946990..4947016,-!p4@Zfp579!0.08!1.02!Zfp579;;chr6:128312772..128312792,+!p2@Foxm1!0.08!1.02!Foxm1;;chr8:87237732..87237745,-!p7@Nfix!0.08!0.85!Nfix;;chr19:23215509..23215523,+!p4@Klf9!0.08!0.51!Klf9;;chr19:55817261..55817274,+!p15@Tcf7l2!0.08!0.51!Tcf7l2;;chr15:10391745..10391753,-!p3@Dnajc21!0.08!0.51!Dnajc21;;chr6:128312812..128312821,+!p5@Foxm1!0.08!0.34!Foxm1;;chr5:38611816..38611827,+!p4@Lyar!0.08!0.34!Lyar;;chr16:30065419..30065437,+!p1@Hes1!0.07!56.41!Hes1;;chr18:60720384..60720450,+!p1@Rbm22!0.07!54.71!Rbm22;;chr8:13338760..13338817,+!p1@Tfdp1!0.07!36.47!Tfdp1;;chr19:4397052..4397098,-!p1@Kdm2a!0.07!26.93!Kdm2a;;chr8:118231723..118231740,-!p1@Maf!0.07!23.01!Maf;;chr11:4604645..4604705,+!p1@Zmat5!0.07!13.12!Zmat5;;chr7:48888915..48888973,+!p1@Zfp788!0.07!12.78!Zfp788;;chr1:141318773..141318840,+!p1@Zbtb41!0.07!11.76!Zbtb41;;chr7:16760707..16760787,+!p1@LOC100046899,p1@Meis3!0.07!11.08!Meis3;;chr16:17531112..17531164,-!p1@Thap7!0.07!10.57!Thap7;;chr15:57908011..57908070,-!p2@Zhx1,p3@9130401M01Rik!0.07!9.03!Zhx1;;chr2:37278415..37278478,-!p1@Rc3h2!0.07!8.69!Rc3h2;;chr10:75495343..75495405,+!p1@Zfp280b!0.07!8.18!Zfp280b;;chr19:26822880..26822964,+!p2@Smarca2!0.07!8.18!Smarca2;;chr14:56223010..56223067,+!p1@Irf9!0.07!7.67!Irf9;;chr9:71959634..71959702,-!p2@Tcf12!0.07!7.50!Tcf12;;chr7:30906934..30907020,+!p1@Zfp382!0.07!6.31!Zfp382;;chr6:72849946..72849979,-!p2@Kcmf1!0.07!5.45!Kcmf1;;chr7:5003165..5003203,+!p2@Zfp580!0.07!5.11!Zfp580;;chr15:100058660..100058711,+!p1@Gm1862,p2@Atf1!0.07!2.73!Atf1;;chr17:45692642..45692663,+!p1@Nfkbie!0.07!2.56!Nfkbie;;chr2:115891454..115891471,-!p3@Meis2!0.07!2.39!Meis2;;chr19:9016975..9017004,+!p2@Mta2!0.07!2.39!Mta2;;chr6:133985971..133985991,+!p6@Etv6!0.07!2.05!Etv6;;chr8:83262929..83262957,-!p1@Smarca5!0.07!2.05!Smarca5;;chr18:80348151..80348181,-!p2@Adnp2!0.07!1.87!Adnp2;;chrX:35542909..35542927,+!p4@Zbtb33!0.07!1.87!Zbtb33;;chr18:7004715..7004731,-!p1@Mkx!0.07!1.70!Mkx;;chr18:75979828..75979864,+!p2@Zbtb7c!0.07!1.53!Zbtb7c;;chr5:107125778..107125803,-!p4@Zfp644!0.07!1.53!Zfp644;;chr1:9690424..9690467,-!p1@Mybl1!0.07!1.36!Mybl1;;chr15:75799598..75799619,+!p3@Zfp707!0.07!1.36!Zfp707;;chr10:127896265..127896276,+!p4@Smarcc2!0.07!1.02!Smarcc2;;chr5:31262699..31262712,-!p2@Preb!0.07!0.85!Preb;;chr8:87324311..87324316,-!p8@Nfix!0.07!0.85!Nfix;;chr18:69505476..69505494,+!p15@Tcf4!0.07!0.85!Tcf4;;chr16:84835585..84835596,+!p9@Gabpa!0.07!0.68!Gabpa;;chr16:43619156..43619171,+!p16@Zbtb20!0.07!0.51!Zbtb20;;chr18:76219161..76219176,+!p4@Zbtb7c!0.07!0.51!Zbtb7c;;chr18:14131020..14131033,-!p4@Zfp521!0.07!0.51!Zfp521;;chr7:5003069..5003078,+!p5@Zfp580!0.07!0.51!Zfp580;;chr6:133985790..133985801,+!p8@Etv6!0.07!0.51!Etv6;;chr15:40486427..40486437,+!p5@Zfpm2!0.07!0.51!Zfpm2;;chr11:98636373..98636387,-!p5@Nr1d1!0.07!0.34!Nr1d1;;chr10:126726112..126726123,-!p12@Mbd6!0.07!0.34!Mbd6;;chr17:46692986..46692993,-!p6@Srf!0.07!0.34!Srf;;chr16:43364012..43364030,+!p22@Zbtb20!0.07!0.17!Zbtb20;;chr19:43686789..43686811,+!p1@Nkx2-3!0.07!0.17!Nkx2-3;;chr18:65742044..65742053,+!p11@Zfp532!0.07!0.17!Zfp532;;chr19:43686882..43686906,+!p2@Nkx2-3!0.07!0.17!Nkx2-3;;chr17:44873311..44873322,-!p13@Runx2!0.07!0.17!Runx2;;chr19:5424089..5424106,-!p10@Drap1!0.07!0.17!Drap1;;chr16:43364258..43364270,+!p27@Zbtb20!0.07!0.17!Zbtb20;;chr16:30064437..30064449,+!p11@Hes1!0.07!0.17!Hes1;;chr17:44951365..44951368,-!p21@Runx2!0.07!0.17!Runx2;;chr18:3280995..3281013,-!p23@Crem!0.07!0.17!Crem;;chr17:34784066..34784067,+!p5@Atf6b!0.07!0.17!Atf6b;;chr17:44872524..44872537,-!p9@Runx2!0.07!0.17!Runx2;;chr16:55838893..55838902,-!p16@Nfkbiz!0.07!0.17!Nfkbiz;;chr17:71201572..71201601,-!p10@Tgif1!0.07!0.17!Tgif1;;chr19:23215616..23215627,+!p9@Klf9!0.07!0.17!Klf9;;chr18:3337249..3337274,-!p17@Crem!0.07!0.17!Crem;;chr15:96117679..96117696,+!p6@Arid2!0.07!0.17!Arid2;;chr16:50331100..50331130,-!p3@Bbx!0.07!0.17!Bbx;;chr11:96160360..96160397,+!p3@Hoxb6!0.07!0.17!Hoxb6;;chr11:23671199..23671210,-!p9@Rel!0.07!0.17!Rel;;chr11:21901587..21901604,-!p2@Otx1!0.07!0.17!Otx1;;chr11:53164494..53164501,+!p10@Aff4!0.07!0.17!Aff4;;chr11:23671279..23671293,-!p8@Rel!0.07!0.17!Rel;;chr11:44431430..44431437,+!p17@Ebf1!0.07!0.17!Ebf1;;chr10:5734582..5734595,-!p10@Esr1!0.07!0.17!Esr1;;chr11:102180656..102180663,-!p24@Ubtf!0.07!0.17!Ubtf;;chr11:96055650..96055665,+!p3@Hoxb13!0.07!0.17!Hoxb13;;chr10:20032169..20032206,+!p8@Bclaf1!0.07!0.17!Bclaf1;;chr11:58717647..58717659,-!p3@Zfp39!0.07!0.17!Zfp39;;chr11:98822047..98822072,+!p9@Rara!0.07!0.17!Rara;;chr12:100009228..100009251,+!p2@Zc3h14!0.07!0.17!Zc3h14;;chr10:30375559..30375568,-!p9@Ncoa7!0.07!0.17!Ncoa7;;chr11:96685487..96685512,-!p7@Nfe2l1!0.07!0.17!Nfe2l1;;chr11:96145393..96145407,+!p3@Hoxb7!0.07!0.17!Hoxb7;;chr10:67000934..67000943,+!p8@Egr2!0.07!0.17!Egr2;;chr10:119913974..119913992,-!p9@Hmga2!0.07!0.17!Hmga2;;chr11:100721584..100721587,+!p8@Stat5a!0.07!0.17!Stat5a;;chr10:30522660..30522671,-!p10@Ncoa7!0.07!0.17!Ncoa7;;chr11:96145537..96145556,+!p6@Hoxb7!0.07!0.17!Hoxb7;;chr11:100721732..100721742,+!p3@Stat5a!0.07!0.17!Stat5a;;chr11:96160426..96160443,+!p2@Hoxb6!0.07!0.17!Hoxb6;; | |expression_enrichment_score=chr15:102828658..102828678,+!p1@Hoxc6!1.89!75.84!Hoxc6;;chr19:5447886..5447905,+!p1@Fosl1!1.84!67.83!Fosl1;;chr6:52190467..52190500,-!p1@Hoxa10!1.66!44.65!Hoxa10;;chr2:30700881..30700916,+!p1@Prrx2!1.63!76.86!Prrx2;;chr3:99057269..99057306,+!p1@Tbx15!1.62!48.57!Tbx15;;chr12:74147689..74147711,-!p1@Six1!1.59!81.64!Six1;;chr16:14705925..14705951,+!p1@Snai2!1.57!244.40!Snai2;;chr15:102797288..102797302,+!p1@Hoxc10!1.53!32.72!Hoxc10;;chr16:14705961..14705978,+!p2@Snai2!1.51!139.92!Snai2;;chr17:44951553..44951586,-!p2@Runx2!1.51!34.77!Runx2;;chr2:30700857..30700873,+!p3@Prrx2!1.48!39.71!Prrx2;;chr15:102751603..102751630,+!p1@Hoxc13!1.48!29.48!Hoxc13;;chr19:5447692..5447711,+!p2@Fosl1!1.44!26.76!Fosl1;;chr15:102797225..102797243,+!p2@Hoxc10!1.42!25.22!Hoxc10;;chr15:102751578..102751600,+!p2@Hoxc13!1.40!24.20!Hoxc13;;chr6:52176164..52176195,-!p1@Hoxa9!1.36!26.93!Hoxa9;;chr6:6831950..6831985,-!p2@Dlx5!1.36!24.03!Dlx5;;chr2:152758901..152758925,-!p1@Foxs1!1.31!85.04!Foxs1;;chr13:99124189..99124205,+!p1@Foxd1!1.31!29.65!Foxd1;;chr6:83661226..83661282,+!p1@Vax2!1.31!19.60!Vax2;;chr6:6831986..6832007,-!p4@Dlx5!1.29!18.41!Dlx5;;chr15:102797170..102797182,+!p3@Hoxc10!1.21!15.34!Hoxc10;;chr13:31898637..31898653,+!p2@Foxc1!1.20!26.42!Foxc1;;chr13:55932591..55932622,-!p1@Pitx1!1.20!17.72!Pitx1;;chr7:52071956..52071978,-!p1@Atf5!1.19!455.05!Atf5;;chr13:31898729..31898761,+!p1@Foxc1!1.19!35.45!Foxc1;;chr1:165243792..165243808,-!p1@Prrx1!1.18!48.74!Prrx1;;chr8:94881733..94881790,+!p1@Irx5!1.16!26.59!Irx5;;chr1:140739014..140739032,-!p1@Lhx9!1.11!15.00!Lhx9;;chr15:102751552..102751563,+!p3@Hoxc13!1.11!11.93!Hoxc13;;chr15:97738692..97738747,-!p1@Vdr!1.10!63.40!Vdr;;chr13:72766250..72766273,+!p1@Irx2!1.07!16.53!Irx2;;chr6:6832076..6832092,-!p1@Dlx5!1.06!12.27!Dlx5;;chr13:55932624..55932641,-!p2@Pitx1!1.06!10.40!Pitx1;;chr9:87626083..87626108,-!p1@Tbx18!1.05!22.84!Tbx18;;chr10:67000609..67000625,+!p1@Egr2!1.03!22.84!Egr2;;chr13:31898496..31898519,+!p3@Foxc1!1.02!15.51!Foxc1;;chr15:102839948..102839975,+!p3@Hoxc6!1.00!9.03!Hoxc6;;chr9:87625971..87625992,-!p2@Tbx18!0.99!8.86!Tbx18;;chr15:102828642..102828653,+!p2@Hoxc6!0.98!8.52!Hoxc6;;chr16:14705668..14705683,+!p3@Snai2!0.98!8.52!Snai2;;chr15:102087737..102087801,-!p3@Rarg!0.95!13.46!Rarg;;chr16:14705746..14705761,+!p4@Snai2!0.95!8.01!Snai2;;chr3:66785181..66785199,-!p2@Shox2!0.95!7.84!Shox2;;chr10:67375368..67375433,-!p1@Zfp365!0.93!13.63!Zfp365;;chr6:52163319..52163342,-!p1@Hoxa3!0.93!11.08!Hoxa3;;chr12:34642682..34642753,+!p2@Twist1!0.91!19.60!Twist1;;chr13:31717548..31717596,+!p1@Foxf2!0.91!14.49!Foxf2;;chr6:72185210..72185228,-!p3@Atoh8!0.90!12.10!Atoh8;;chr15:102797183..102797205,+!p4@Hoxc10!0.90!6.99!Hoxc10;;chr4:134676555..134676575,+!p2@Runx3!0.89!6.82!Runx3;;chr6:52190668..52190682,-!p3@Hoxa10!0.88!6.65!Hoxa10;;chr6:72185232..72185272,-!p1@Atoh8!0.87!19.26!Atoh8;;chr13:55932739..55932756,-!p5@Pitx1!0.87!6.48!Pitx1;;chr15:102076870..102076941,-!p1@Rarg!0.86!72.60!Rarg;;chr11:44430812..44430838,+!p1@Ebf1!0.86!65.10!Ebf1;;chr9:96653072..96653154,-!p1@Zbtb38!0.86!17.38!Zbtb38;;chr8:94325321..94325366,-!p1@Irx3!0.86!15.85!Irx3;;chr1:186556375..186556404,-!p3@Hlx!0.86!11.59!Hlx;;chr2:30700788..30700824,+!p2@Prrx2!0.86!9.88!Prrx2;;chr1:165243591..165243625,-!p2@Prrx1!0.84!9.20!Prrx1;;chr8:123640063..123640077,+!p1@Foxc2!0.83!10.91!Foxc2;;chr3:66785857..66785873,-!p1@Shox2!0.83!5.79!Shox2;;chr3:66785201..66785226,-!p3@Shox2!0.82!5.62!Shox2;;chr11:96153767..96153822,+!p1@Hoxb6!0.81!8.69!Hoxb6;;chr10:80889867..80889924,-!p1@Nfic!0.80!161.06!Nfic;;chr3:99057256..99057268,+!p3@Tbx15!0.80!5.28!Tbx15;;chr2:167363692..167363710,+!p1@Snai1!0.79!68.00!Snai1;;chr15:102820964..102821006,+!p1@Hoxc8!0.79!5.11!Hoxc8;;chr6:52184901..52184959,-!p2@Hoxa10!0.79!5.11!Hoxa10;;chr3:5218629..5218684,+!p1@Zfhx4!0.78!17.72!Zfhx4;;chr1:57029281..57029326,-!p1@Satb2!0.78!8.18!Satb2;;chr2:152758938..152758954,-!p2@Foxs1!0.77!6.99!Foxs1;;chr6:52176144..52176161,-!p2@Hoxa9!0.77!4.94!Hoxa9;;chr17:44951431..44951445,-!p3@Runx2!0.76!4.77!Runx2;;chr19:55816546..55816556,+!p3@Tcf7l2!0.75!19.26!Tcf7l2;;chr12:9581262..9581282,+!p1@Osr1!0.74!60.33!Osr1;;chr12:86940338..86940357,+!p1@Jdp2!0.73!47.72!Jdp2;;chr19:28754692..28754757,-!p1@Glis3!0.73!20.11!Glis3;;chr15:102087880..102087927,-!p2@Rarg!0.73!10.74!Rarg;;chr1:57028538..57028553,-!p6@Satb2!0.73!4.43!Satb2;;chr1:165243379..165243402,-!p3@Prrx1!0.72!6.65!Prrx1;;chr11:94981424..94981439,+!p1@Dlx3!0.72!4.94!Dlx3;;chr16:92697560..92697592,-!p2@Runx1!0.71!28.80!Runx1;;chr16:43363152..43363186,+!p3@Zbtb20!0.71!10.23!Zbtb20;;chr13:31898529..31898542,+!p5@Foxc1!0.71!5.11!Foxc1;;chr8:94325814..94325839,-!p2@Irx3!0.70!9.03!Irx3;;chr5:53981592..53981616,+!p3@Rbpj!0.70!8.18!Rbpj;;chr13:72101178..72101203,-!p1@Irx1!0.70!6.65!Irx1;;chr7:144506077..144506128,-!p1@Ebf3!0.69!9.88!Ebf3;;chr12:9581284..9581303,+!p2@Osr1!0.69!8.01!Osr1;;chr15:102839976..102839989,+!p4@Hoxc6!0.69!3.92!Hoxc6;;chr1:186556410..186556424,-!p1@Hlx!0.68!13.29!Hlx;;chr12:958131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Nr1h2;;chr12:41172341..41172385,-!p1@Zfp277!0.09!38.01!Zfp277;;chr17:32967140..32967197,-!p1@Zfp799!0.09!14.66!Zfp799;;chr10:57206160..57206220,+!p1@Hsf2!0.09!11.42!Hsf2;;chr15:75771454..75771521,+!p1@Zfp623!0.09!9.54!Zfp623;;chr17:28369668..28369734,+!p1@Ppard!0.09!9.37!Ppard;;chr9:20385951..20386032,+!p1@Zfp846!0.09!8.35!Zfp846;;chr2:126501197..126501245,-!p1@Gabpb1!0.09!7.84!Gabpb1;;chr7:5003117..5003159,+!p1@Zfp580!0.09!7.67!Zfp580;;chr7:11080671..11080750,-!p1@Zik1!0.09!6.99!Zik1;;chr4:133801494..133801519,-!p2@Zfp593!0.09!6.99!Zfp593;;chr8:118230866..118230891,-!p4@Maf!0.09!6.48!Maf;;chr17:35031460..35031518,+!p1@Zbtb12!0.09!4.77!Zbtb12;;chr19:5610038..5610066,-!p1@Kat5!0.09!4.60!Kat5;;chr13:67209482..67209545,-!p1@Zfp708!0.09!4.43!Zfp708;;chr2:72817659..72817725,-!p5@Sp3!0.09!3.92!Sp3;;chr17:45570488..45570510,-!p3@Cdc5l!0.09!3.07!Cdc5l;;chr3:89197057..89197114,-!p1@Zbtb7b!0.09!2.90!Zbtb7b;;chr11:74644716..74644780,+!p2@Mnt!0.09!2.56!Mnt;;chr7:134169741..134169760,-!p10@Maz!0.09!2.56!Maz;;chr17:71202822..71202877,-!p3@Tgif1!0.09!2.39!Tgif1;;chr2:91077124..91077146,-!p3@Ddb2!0.09!2.05!Ddb2;;chr15:76181718..76181729,+!p3@Maf1!0.09!1.87!Maf1;;chr7:134519511..134519534,-!p2@Zfp747!0.09!1.19!Zfp747;;chr1:95651267..95651284,-!p4@Thap4!0.09!1.19!Thap4;;chr19:55817590..55817625,+!p11@Tcf7l2!0.09!0.85!Tcf7l2;;chr1:64167765..64167777,-!p6@Klf7!0.09!0.68!Klf7;;chr12:39507404..39507441,+!p4@Etv1!0.09!0.68!Etv1;;chr12:77470718..77470752,-!p4@Zbtb25!0.09!0.68!Zbtb25;;chr8:118230847..118230856,-!p8@Maf!0.09!0.68!Maf;;chr9:69137648..69137656,+!p5@Rora!0.09!0.68!Rora;;chr9:20385789..20385803,+!p5@Zfp846!0.09!0.51!Zfp846;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.09!0.51!Zfhx3;;chr13:30077917..30077928,-!p4@E2f3!0.09!0.51!E2f3;;chr15:79178029..79178044,+!p4@Maff!0.09!0.51!Maff;;chr15:81633224..81633235,+!p5@Tef!0.09!0.51!Tef;;chr10:107769219..107769226,+!p5@Pawr!0.09!0.51!Pawr;;chr14:22806778..22806795,-!p5@Zfp503!0.09!0.34!Zfp503;;chr11:98603185..98603208,+!p1@Thra!0.08!65.96!Thra;;chr19:55816300..55816332,+!p1@Tcf7l2!0.08!50.79!Tcf7l2;;chr5:138187195..138187255,+!p1@Tsc22d4!0.08!46.36!Tsc22d4;;chr7:119822841..119822887,+!p1@Tead1!0.08!34.09!Tead1;;chr2:27532754..27532815,+!p1@Rxra!0.08!31.36!Rxra;;chr1:172797892..172797915,-!p1@Atf6!0.08!30.17!Atf6;;chr2:31428295..31428361,+!p1@Fubp3!0.08!28.29!Fubp3;;chr17:28487692..28487765,-!p1@Tead3!0.08!20.96!Tead3;;chr13:53076396..53076452,-!p1@Nfil3!0.08!18.92!Nfil3;;chr9:19426523..19426584,+!p1@Zfp317!0.08!15.34!Zfp317;;chr8:27268658..27268724,+!p1@Thap1!0.08!12.44!Thap1;;chr2:154395581..154395610,-!p1@E2f1!0.08!10.40!E2f1;;chr11:101413151..101413207,-!p1@Brca1!0.08!9.88!Brca1;;chr4:97444012..97444045,+!p4@Nfia!0.08!7.50!Nfia;;chr17:45570660..45570694,-!p1@Cdc5l!0.08!6.65!Cdc5l;;chr14:65977498..65977528,+!p1@Zfp395!0.08!6.48!Zfp395;;chr4:118967125..118967143,-!p2@Ybx1!0.08!6.14!Ybx1;;chr6:124959683..124959735,+!p2@Zfp384!0.08!5.62!Zfp384;;chr1:138521528..138521572,+!p1@Zfp281!0.08!5.62!Zfp281;;chr2:44965593..44965624,-!p3@Zeb2!0.08!5.28!Zeb2;;chrX:108810678..108810736,-!p1@Hdx!0.08!2.90!Hdx;;chr8:107694596..107694619,+!p4@Cbfb!0.08!2.39!Cbfb;;chr17:22362583..22362606,-!p1@Gm4944!0.08!2.39!Gm4944;;chr8:111227738..111227793,+!p@chr8:111227738..111227793,+!0.08!1.87!Zfhx3;;chr10:93610727..93610754,+!p2@Nr2c1!0.08!1.87!Nr2c1;;chr12:85658041..85658051,+!p3@Zfp410!0.08!1.70!Zfp410;;chr16:4559721..4559747,-!p3@Tfap4!0.08!1.53!Tfap4;;chr13:59924354..59924366,-!p3@Zcchc6!0.08!1.19!Zcchc6;;chr13:96095097..96095114,+!p5@Zbed3!0.08!1.02!Zbed3;;chr7:4946990..4947016,-!p4@Zfp579!0.08!1.02!Zfp579;;chr6:128312772..128312792,+!p2@Foxm1!0.08!1.02!Foxm1;;chr8:87237732..87237745,-!p7@Nfix!0.08!0.85!Nfix;;chr19:23215509..23215523,+!p4@Klf9!0.08!0.51!Klf9;;chr19:55817261..55817274,+!p15@Tcf7l2!0.08!0.51!Tcf7l2;;chr15:10391745..10391753,-!p3@Dnajc21!0.08!0.51!Dnajc21;;chr6:128312812..128312821,+!p5@Foxm1!0.08!0.34!Foxm1;;chr5:38611816..38611827,+!p4@Lyar!0.08!0.34!Lyar;;chr16:30065419..30065437,+!p1@Hes1!0.07!56.41!Hes1;;chr18:60720384..60720450,+!p1@Rbm22!0.07!54.71!Rbm22;;chr8:13338760..13338817,+!p1@Tfdp1!0.07!36.47!Tfdp1;;chr19:4397052..4397098,-!p1@Kdm2a!0.07!26.93!Kdm2a;;chr8:118231723..118231740,-!p1@Maf!0.07!23.01!Maf;;chr11:4604645..4604705,+!p1@Zmat5!0.07!13.12!Zmat5;;chr7:48888915..48888973,+!p1@Zfp788!0.07!12.78!Zfp788;;chr1:141318773..141318840,+!p1@Zbtb41!0.07!11.76!Zbtb41;;chr7:16760707..16760787,+!p1@LOC100046899,p1@Meis3!0.07!11.08!Meis3;;chr16:17531112..17531164,-!p1@Thap7!0.07!10.57!Thap7;;chr15:57908011..57908070,-!p2@Zhx1,p3@9130401M01Rik!0.07!9.03!Zhx1;;chr2:37278415..37278478,-!p1@Rc3h2!0.07!8.69!Rc3h2;;chr10:75495343..75495405,+!p1@Zfp280b!0.07!8.18!Zfp280b;;chr19:26822880..26822964,+!p2@Smarca2!0.07!8.18!Smarca2;;chr14:56223010..56223067,+!p1@Irf9!0.07!7.67!Irf9;;chr9:71959634..71959702,-!p2@Tcf12!0.07!7.50!Tcf12;;chr7:30906934..30907020,+!p1@Zfp382!0.07!6.31!Zfp382;;chr6:72849946..72849979,-!p2@Kcmf1!0.07!5.45!Kcmf1;;chr7:5003165..5003203,+!p2@Zfp580!0.07!5.11!Zfp580;;chr15:100058660..100058711,+!p1@Gm1862,p2@Atf1!0.07!2.73!Atf1;;chr17:45692642..45692663,+!p1@Nfkbie!0.07!2.56!Nfkbie;;chr2:115891454..115891471,-!p3@Meis2!0.07!2.39!Meis2;;chr19:9016975..9017004,+!p2@Mta2!0.07!2.39!Mta2;;chr6:133985971..133985991,+!p6@Etv6!0.07!2.05!Etv6;;chr8:83262929..83262957,-!p1@Smarca5!0.07!2.05!Smarca5;;chr18:80348151..80348181,-!p2@Adnp2!0.07!1.87!Adnp2;;chrX:35542909..35542927,+!p4@Zbtb33!0.07!1.87!Zbtb33;;chr18:7004715..7004731,-!p1@Mkx!0.07!1.70!Mkx;;chr18:75979828..75979864,+!p2@Zbtb7c!0.07!1.53!Zbtb7c;;chr5:107125778..107125803,-!p4@Zfp644!0.07!1.53!Zfp644;;chr1:9690424..9690467,-!p1@Mybl1!0.07!1.36!Mybl1;;chr15:75799598..75799619,+!p3@Zfp707!0.07!1.36!Zfp707;;chr10:127896265..127896276,+!p4@Smarcc2!0.07!1.02!Smarcc2;;chr5:31262699..31262712,-!p2@Preb!0.07!0.85!Preb;;chr8:87324311..87324316,-!p8@Nfix!0.07!0.85!Nfix;;chr18:69505476..69505494,+!p15@Tcf4!0.07!0.85!Tcf4;;chr16:84835585..84835596,+!p9@Gabpa!0.07!0.68!Gabpa;;chr16:43619156..43619171,+!p16@Zbtb20!0.07!0.51!Zbtb20;;chr18:76219161..76219176,+!p4@Zbtb7c!0.07!0.51!Zbtb7c;;chr18:14131020..14131033,-!p4@Zfp521!0.07!0.51!Zfp521;;chr7:5003069..5003078,+!p5@Zfp580!0.07!0.51!Zfp580;;chr6:133985790..133985801,+!p8@Etv6!0.07!0.51!Etv6;;chr15:40486427..40486437,+!p5@Zfpm2!0.07!0.51!Zfpm2;;chr11:98636373..98636387,-!p5@Nr1d1!0.07!0.34!Nr1d1;;chr10:126726112..126726123,-!p12@Mbd6!0.07!0.34!Mbd6;;chr17:46692986..46692993,-!p6@Srf!0.07!0.34!Srf;;chr16:43364012..43364030,+!p22@Zbtb20!0.07!0.17!Zbtb20;;chr19:43686789..43686811,+!p1@Nkx2-3!0.07!0.17!Nkx2-3;;chr18:65742044..65742053,+!p11@Zfp532!0.07!0.17!Zfp532;;chr19:43686882..43686906,+!p2@Nkx2-3!0.07!0.17!Nkx2-3;;chr17:44873311..44873322,-!p13@Runx2!0.07!0.17!Runx2;;chr19:5424089..5424106,-!p10@Drap1!0.07!0.17!Drap1;;chr16:43364258..43364270,+!p27@Zbtb20!0.07!0.17!Zbtb20;;chr16:30064437..30064449,+!p11@Hes1!0.07!0.17!Hes1;;chr17:44951365..44951368,-!p21@Runx2!0.07!0.17!Runx2;;chr18:3280995..3281013,-!p23@Crem!0.07!0.17!Crem;;chr17:34784066..34784067,+!p5@Atf6b!0.07!0.17!Atf6b;;chr17:44872524..44872537,-!p9@Runx2!0.07!0.17!Runx2;;chr16:55838893..55838902,-!p16@Nfkbiz!0.07!0.17!Nfkbiz;;chr17:71201572..71201601,-!p10@Tgif1!0.07!0.17!Tgif1;;chr19:23215616..23215627,+!p9@Klf9!0.07!0.17!Klf9;;chr18:3337249..3337274,-!p17@Crem!0.07!0.17!Crem;;chr15:96117679..96117696,+!p6@Arid2!0.07!0.17!Arid2;;chr16:50331100..50331130,-!p3@Bbx!0.07!0.17!Bbx;;chr11:96160360..96160397,+!p3@Hoxb6!0.07!0.17!Hoxb6;;chr11:23671199..23671210,-!p9@Rel!0.07!0.17!Rel;;chr11:21901587..21901604,-!p2@Otx1!0.07!0.17!Otx1;;chr11:53164494..53164501,+!p10@Aff4!0.07!0.17!Aff4;;chr11:23671279..23671293,-!p8@Rel!0.07!0.17!Rel;;chr11:44431430..44431437,+!p17@Ebf1!0.07!0.17!Ebf1;;chr10:5734582..5734595,-!p10@Esr1!0.07!0.17!Esr1;;chr11:102180656..102180663,-!p24@Ubtf!0.07!0.17!Ubtf;;chr11:96055650..96055665,+!p3@Hoxb13!0.07!0.17!Hoxb13;;chr10:20032169..20032206,+!p8@Bclaf1!0.07!0.17!Bclaf1;;chr11:58717647..58717659,-!p3@Zfp39!0.07!0.17!Zfp39;;chr11:98822047..98822072,+!p9@Rara!0.07!0.17!Rara;;chr12:100009228..100009251,+!p2@Zc3h14!0.07!0.17!Zc3h14;;chr10:30375559..30375568,-!p9@Ncoa7!0.07!0.17!Ncoa7;;chr11:96685487..96685512,-!p7@Nfe2l1!0.07!0.17!Nfe2l1;;chr11:96145393..96145407,+!p3@Hoxb7!0.07!0.17!Hoxb7;;chr10:67000934..67000943,+!p8@Egr2!0.07!0.17!Egr2;;chr10:119913974..119913992,-!p9@Hmga2!0.07!0.17!Hmga2;;chr11:100721584..100721587,+!p8@Stat5a!0.07!0.17!Stat5a;;chr10:30522660..30522671,-!p10@Ncoa7!0.07!0.17!Ncoa7;;chr11:96145537..96145556,+!p6@Hoxb7!0.07!0.17!Hoxb7;;chr11:100721732..100721742,+!p3@Stat5a!0.07!0.17!Stat5a;;chr11:96160426..96160443,+!p2@Hoxb6!0.07!0.17!Hoxb6;; | ||
|ffid_belonging_in_development=CL:0000134 | |ffid_belonging_in_development=CL:0000134 | ||
Line 42: | Line 45: | ||
|is_a=EFO:0002091;;FF:0000488 | |is_a=EFO:0002091;;FF:0000488 | ||
|is_obsolete= | |is_obsolete= | ||
| | |library_id=CNhs11939 | ||
|name=ST2 (Mesenchymal stem cells) cells, medium change (without induction | |library_id_phase_based=2:CNhs11939 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;12338 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;12338 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.timecourse.hCAGE/ST2%2520%2528Mesenchymal%2520stem%2520cells%2529%2520cells%252c%2520medium%2520change%2520%2528without%2520induction%2529%252c%252000hr%252c%2520biol_rep1%2520%2528000hC4%2529.CNhs11939.12338-130I7.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.timecourse.hCAGE/ST2%2520%2528Mesenchymal%2520stem%2520cells%2529%2520cells%252c%2520medium%2520change%2520%2528without%2520induction%2529%252c%252000hr%252c%2520biol_rep1%2520%2528000hC4%2529.CNhs11939.12338-130I7.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/ST2%2520%2528Mesenchymal%2520stem%2520cells%2529%2520cells%252c%2520medium%2520change%2520%2528without%2520induction%2529%252c%252000hr%252c%2520biol_rep1%2520%2528000hC4%2529.CNhs11939.12338-130I7.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/ST2%2520%2528Mesenchymal%2520stem%2520cells%2529%2520cells%252c%2520medium%2520change%2520%2528without%2520induction%2529%252c%252000hr%252c%2520biol_rep1%2520%2528000hC4%2529.CNhs11939.12338-130I7.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.timecourse.hCAGE/ST2%2520%2528Mesenchymal%2520stem%2520cells%2529%2520cells%252c%2520medium%2520change%2520%2528without%2520induction%2529%252c%252000hr%252c%2520biol_rep1%2520%2528000hC4%2529.CNhs11939.12338-130I7.mm9.nobarcode.rdna.fa.gz | |||
|name=ST2 (Mesenchymal stem cells) cells, medium change (without induction) | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11939,LSID835,release010,COMPLETED | |profile_hcage=CNhs11939,LSID835,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=-0.00491858518403987,0,0,0,0,0,0.142292293125457,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.0125452640974626,0,0,0,0,0,0.863675027414456,0,0,0,0,0,0,0,-0.431039148092547,0,0,0,0,0,-0.0327538922237442,-0.0574258332772582,-0.395982762161975,-0.984211366477826,-0.201523073391267,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660055475634404,0,0,0,0,-0.0143210563637314,0,0.07119584818478,0.22575402231268,0.483610668505383,-0.0017853472398893,-0.0456956890020557,-0.310650657339386,-0.158091042771083,-0.104521816999652,0,-0.0780086007519514,-0.053175928068288,-0.204004741380873,0.0683455646190839,0,-0.023095175143242,-0.185781227480586,0.0134389252788579,-0.0104860302208236,0,0,0,0,0,0,-0.059831304826955,-0.0600075353449951,-0.0355906505087625,0,0,0.0683455646190839,0,0 | |repeat_enrich_byfamily=-0.00491858518403987,0,0,0,0,0,0.142292293125457,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.0125452640974626,0,0,0,0,0,0.863675027414456,0,0,0,0,0,0,0,-0.431039148092547,0,0,0,0,0,-0.0327538922237442,-0.0574258332772582,-0.395982762161975,-0.984211366477826,-0.201523073391267,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660055475634404,0,0,0,0,-0.0143210563637314,0,0.07119584818478,0.22575402231268,0.483610668505383,-0.0017853472398893,-0.0456956890020557,-0.310650657339386,-0.158091042771083,-0.104521816999652,0,-0.0780086007519514,-0.053175928068288,-0.204004741380873,0.0683455646190839,0,-0.023095175143242,-0.185781227480586,0.0134389252788579,-0.0104860302208236,0,0,0,0,0,0,-0.059831304826955,-0.0600075353449951,-0.0355906505087625,0,0,0.0683455646190839,0,0 | ||
Line 62: | Line 75: | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id=130I7 | |rna_tube_id=130I7 | ||
|rna_weight_ug=5. | |rna_weight_ug=5.5 | ||
|sample_age= | |sample_age= | ||
|sample_category=time courses | |sample_category=time courses | ||
Line 83: | Line 96: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=bone marrow | |sample_tissue=bone marrow | ||
|time=00hr | |||
|timecourse=MSC_to_adipocyte_(mouse),MSC_to_osteocyte_(mouse) | |||
|top_motifs=NKX3-1:2.270982478;HAND1,2:2.09653388245;CDC5L:1.91611675102;TEF:1.74554469437;ALX4:1.57761717205;HMX1:1.56079915197;BACH2:1.53910747373;GLI1..3:1.53469452549;NFE2L2:1.50207553331;TP53:1.46709610658;UFEwm:1.43721410639;FOXP3:1.30251827879;NFE2:1.29608724642;GCM1,2:1.1669118621;SRF:1.14759972505;PDX1:1.14677114029;TEAD1:1.14515635523;HES1:1.13276944777;ZNF238:1.10631575995;IRF7:1.07477205996;TLX1..3_NFIC{dimer}:1.03524931819;NFE2L1:1.02663333105;SREBF1,2:1.01808934427;RBPJ:1.00333333134;NANOG{mouse}:0.974570413021;FOS_FOS{B,L1}_JUN{B,D}:0.959544281276;POU1F1:0.941942320793;ELK1,4_GABP{A,B1}:0.921615499699;NR3C1:0.891422043795;NFATC1..3:0.874516403496;YY1:0.85008221829;GFI1B:0.811705113733;HSF1,2:0.808088881571;ZNF384:0.78037128192;NR1H4:0.756320149014;ZNF143:0.724627037743;RUNX1..3:0.714679395813;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.702835285472;SMAD1..7,9:0.678486035372;EN1,2:0.665473922539;NKX2-3_NKX2-5:0.660033773858;EVI1:0.658174074346;ATF4:0.642715468515;HLF:0.639558970563;STAT2,4,6:0.62934437029;HIF1A:0.618414170602;CDX1,2,4:0.595123404145;FOXM1:0.556447614758;MYBL2:0.550962539658;CEBPA,B_DDIT3:0.544915424414;E2F1..5:0.523962864592;TFAP4:0.464884379217;ALX1:0.451929883096;ESR1:0.448103438052;IKZF2:0.442980634263;ONECUT1,2:0.44241081622;SOX17:0.417427512367;DMAP1_NCOR{1,2}_SMARC:0.398757967451;MYB:0.367234965087;SOX5:0.365108461718;ZNF423:0.335845532057;NFIL3:0.326770443548;GZF1:0.311782241494;ELF1,2,4:0.300240201002;RXR{A,B,G}:0.293088768947;MTE{core}:0.277299561353;IRF1,2:0.262406990803;NKX6-1,2:0.256547214606;GFI1:0.253438870312;PAX8:0.233765140026;KLF4:0.222733239583;GTF2I:0.210452599404;NRF1:0.207777138547;NR6A1:0.206485447464;TFCP2:0.204708181788;STAT1,3:0.199203006229;EBF1:0.187066381842;HMGA1,2:0.134525118732;NFY{A,B,C}:0.127292589089;ZBTB16:0.0920305663009;POU5F1:0.0907227650702;SPIB:0.0838200725082;FOXL1:0.083483174911;HOX{A5,B5}:0.0656518878712;RFX1:0.0290171935478;IKZF1:0.026021165871;bHLH_family:0.0124295958973;GTF2A1,2:0.0029114502438;XCPE1{core}:-0.0163835762024;FOSL2:-0.0198391753556;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0224418055092;MAFB:-0.03150821848;ATF6:-0.0363481552317;POU3F1..4:-0.0381907584951;GATA4:-0.04422472968;HBP1_HMGB_SSRP1_UBTF:-0.0621689463056;NKX2-1,4:-0.10137994331;AHR_ARNT_ARNT2:-0.105304376146;SPI1:-0.127841927253;T:-0.128687183194;POU2F1..3:-0.163095911445;HOX{A4,D4}:-0.181643635416;MAZ:-0.188995272496;EP300:-0.198797420583;HIC1:-0.208213888064;NFKB1_REL_RELA:-0.224287283023;PAX5:-0.246284802883;PAX6:-0.246925031925;ZBTB6:-0.279570844966;NR5A1,2:-0.291937451451;CREB1:-0.297753995623;ATF5_CREB3:-0.304183952289;HNF4A_NR2F1,2:-0.307241545666;TFDP1:-0.313855868937;FOXO1,3,4:-0.334391248523;PPARG:-0.339236039708;FOX{D1,D2}:-0.345878205973;FOX{F1,F2,J1}:-0.347785695999;TFAP2{A,C}:-0.369440082241;SP1:-0.369819896714;RREB1:-0.385607671375;PRDM1:-0.389148513581;EGR1..3:-0.392903851768;FOX{I1,J2}:-0.400639210964;TFAP2B:-0.426679801807;SOX{8,9,10}:-0.427164223257;NKX2-2,8:-0.42803608388;RORA:-0.428361377498;TOPORS:-0.430447923418;NKX3-2:-0.432429025363;MZF1:-0.437266182251;FOXN1:-0.452530757331;ETS1,2:-0.470837833393;RFX2..5_RFXANK_RFXAP:-0.492933874599;FOXD3:-0.502800785742;RXRA_VDR{dimer}:-0.512498541513;PAX4:-0.521388176064;JUN:-0.529913298436;REST:-0.541228937224;PITX1..3:-0.560047477288;FOXA2:-0.562867162446;HNF1A:-0.56515140658;ZFP161:-0.565882885001;MEF2{A,B,C,D}:-0.572056365857;TBP:-0.574085222409;NHLH1,2:-0.580669634504;LHX3,4:-0.596949379547;ADNP_IRX_SIX_ZHX:-0.597551384422;PRRX1,2:-0.626915084786;TAL1_TCF{3,4,12}:-0.647662312629;CRX:-0.651835900676;OCT4_SOX2{dimer}:-0.65734134478;ARID5B:-0.661852100173;MTF1:-0.668503461236;HOXA9_MEIS1:-0.675747306562;AR:-0.702589986259;ATF2:-0.712985681566;ZNF148:-0.754747724544;PATZ1:-0.75807009242;BREu{core}:-0.786283341435;ZIC1..3:-0.802508984551;PBX1:-0.811330435373;AIRE:-0.812719633513;MED-1{core}:-0.836366229113;MYFfamily:-0.845678493088;FOXP1:-0.870051764499;DBP:-0.872162736855;SOX2:-0.90145040816;NFIX:-0.912233833041;FOXQ1:-0.985594954038;ESRRA:-1.00246872425;PAX2:-1.00257107832;POU6F1:-1.05871959786;CUX2:-1.08653434666;SPZ1:-1.10616318603;TGIF1:-1.13785856165;TLX2:-1.15639584325;LEF1_TCF7_TCF7L1,2:-1.19126791461;TBX4,5:-1.19665865668;VSX1,2:-1.22324419222;PAX1,9:-1.25972848047;BPTF:-1.28020987114;GATA6:-1.3172241181;NANOG:-1.35117658667;STAT5{A,B}:-1.74636594355;SNAI1..3:-1.99907727315;ZEB1:-2.0204020027;LMO2:-2.42478519278;MYOD1:-2.86223747268 | |top_motifs=NKX3-1:2.270982478;HAND1,2:2.09653388245;CDC5L:1.91611675102;TEF:1.74554469437;ALX4:1.57761717205;HMX1:1.56079915197;BACH2:1.53910747373;GLI1..3:1.53469452549;NFE2L2:1.50207553331;TP53:1.46709610658;UFEwm:1.43721410639;FOXP3:1.30251827879;NFE2:1.29608724642;GCM1,2:1.1669118621;SRF:1.14759972505;PDX1:1.14677114029;TEAD1:1.14515635523;HES1:1.13276944777;ZNF238:1.10631575995;IRF7:1.07477205996;TLX1..3_NFIC{dimer}:1.03524931819;NFE2L1:1.02663333105;SREBF1,2:1.01808934427;RBPJ:1.00333333134;NANOG{mouse}:0.974570413021;FOS_FOS{B,L1}_JUN{B,D}:0.959544281276;POU1F1:0.941942320793;ELK1,4_GABP{A,B1}:0.921615499699;NR3C1:0.891422043795;NFATC1..3:0.874516403496;YY1:0.85008221829;GFI1B:0.811705113733;HSF1,2:0.808088881571;ZNF384:0.78037128192;NR1H4:0.756320149014;ZNF143:0.724627037743;RUNX1..3:0.714679395813;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.702835285472;SMAD1..7,9:0.678486035372;EN1,2:0.665473922539;NKX2-3_NKX2-5:0.660033773858;EVI1:0.658174074346;ATF4:0.642715468515;HLF:0.639558970563;STAT2,4,6:0.62934437029;HIF1A:0.618414170602;CDX1,2,4:0.595123404145;FOXM1:0.556447614758;MYBL2:0.550962539658;CEBPA,B_DDIT3:0.544915424414;E2F1..5:0.523962864592;TFAP4:0.464884379217;ALX1:0.451929883096;ESR1:0.448103438052;IKZF2:0.442980634263;ONECUT1,2:0.44241081622;SOX17:0.417427512367;DMAP1_NCOR{1,2}_SMARC:0.398757967451;MYB:0.367234965087;SOX5:0.365108461718;ZNF423:0.335845532057;NFIL3:0.326770443548;GZF1:0.311782241494;ELF1,2,4:0.300240201002;RXR{A,B,G}:0.293088768947;MTE{core}:0.277299561353;IRF1,2:0.262406990803;NKX6-1,2:0.256547214606;GFI1:0.253438870312;PAX8:0.233765140026;KLF4:0.222733239583;GTF2I:0.210452599404;NRF1:0.207777138547;NR6A1:0.206485447464;TFCP2:0.204708181788;STAT1,3:0.199203006229;EBF1:0.187066381842;HMGA1,2:0.134525118732;NFY{A,B,C}:0.127292589089;ZBTB16:0.0920305663009;POU5F1:0.0907227650702;SPIB:0.0838200725082;FOXL1:0.083483174911;HOX{A5,B5}:0.0656518878712;RFX1:0.0290171935478;IKZF1:0.026021165871;bHLH_family:0.0124295958973;GTF2A1,2:0.0029114502438;XCPE1{core}:-0.0163835762024;FOSL2:-0.0198391753556;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0224418055092;MAFB:-0.03150821848;ATF6:-0.0363481552317;POU3F1..4:-0.0381907584951;GATA4:-0.04422472968;HBP1_HMGB_SSRP1_UBTF:-0.0621689463056;NKX2-1,4:-0.10137994331;AHR_ARNT_ARNT2:-0.105304376146;SPI1:-0.127841927253;T:-0.128687183194;POU2F1..3:-0.163095911445;HOX{A4,D4}:-0.181643635416;MAZ:-0.188995272496;EP300:-0.198797420583;HIC1:-0.208213888064;NFKB1_REL_RELA:-0.224287283023;PAX5:-0.246284802883;PAX6:-0.246925031925;ZBTB6:-0.279570844966;NR5A1,2:-0.291937451451;CREB1:-0.297753995623;ATF5_CREB3:-0.304183952289;HNF4A_NR2F1,2:-0.307241545666;TFDP1:-0.313855868937;FOXO1,3,4:-0.334391248523;PPARG:-0.339236039708;FOX{D1,D2}:-0.345878205973;FOX{F1,F2,J1}:-0.347785695999;TFAP2{A,C}:-0.369440082241;SP1:-0.369819896714;RREB1:-0.385607671375;PRDM1:-0.389148513581;EGR1..3:-0.392903851768;FOX{I1,J2}:-0.400639210964;TFAP2B:-0.426679801807;SOX{8,9,10}:-0.427164223257;NKX2-2,8:-0.42803608388;RORA:-0.428361377498;TOPORS:-0.430447923418;NKX3-2:-0.432429025363;MZF1:-0.437266182251;FOXN1:-0.452530757331;ETS1,2:-0.470837833393;RFX2..5_RFXANK_RFXAP:-0.492933874599;FOXD3:-0.502800785742;RXRA_VDR{dimer}:-0.512498541513;PAX4:-0.521388176064;JUN:-0.529913298436;REST:-0.541228937224;PITX1..3:-0.560047477288;FOXA2:-0.562867162446;HNF1A:-0.56515140658;ZFP161:-0.565882885001;MEF2{A,B,C,D}:-0.572056365857;TBP:-0.574085222409;NHLH1,2:-0.580669634504;LHX3,4:-0.596949379547;ADNP_IRX_SIX_ZHX:-0.597551384422;PRRX1,2:-0.626915084786;TAL1_TCF{3,4,12}:-0.647662312629;CRX:-0.651835900676;OCT4_SOX2{dimer}:-0.65734134478;ARID5B:-0.661852100173;MTF1:-0.668503461236;HOXA9_MEIS1:-0.675747306562;AR:-0.702589986259;ATF2:-0.712985681566;ZNF148:-0.754747724544;PATZ1:-0.75807009242;BREu{core}:-0.786283341435;ZIC1..3:-0.802508984551;PBX1:-0.811330435373;AIRE:-0.812719633513;MED-1{core}:-0.836366229113;MYFfamily:-0.845678493088;FOXP1:-0.870051764499;DBP:-0.872162736855;SOX2:-0.90145040816;NFIX:-0.912233833041;FOXQ1:-0.985594954038;ESRRA:-1.00246872425;PAX2:-1.00257107832;POU6F1:-1.05871959786;CUX2:-1.08653434666;SPZ1:-1.10616318603;TGIF1:-1.13785856165;TLX2:-1.15639584325;LEF1_TCF7_TCF7L1,2:-1.19126791461;TBX4,5:-1.19665865668;VSX1,2:-1.22324419222;PAX1,9:-1.25972848047;BPTF:-1.28020987114;GATA6:-1.3172241181;NANOG:-1.35117658667;STAT5{A,B}:-1.74636594355;SNAI1..3:-1.99907727315;ZEB1:-2.0204020027;LMO2:-2.42478519278;MYOD1:-2.86223747268 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:12338-130I7;search_select_hide=table117:12338-130I7 | |||
| | |||
}} | }} |
Latest revision as of 18:38, 4 June 2020
Name: | ST2 (Mesenchymal stem cells) cells, medium change (without induction) |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11939 |
Sample type: | time courses |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11939
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.247 |
1001 | 0.0155 |
1002 | -0.116 |
1003 | 0.228 |
1004 | 0 |
1005 | 0 |
1006 | -0.0916 |
1007 | 0.00293 |
1008 | 0 |
1009 | 0.746 |
101 | 0.0347 |
1010 | 0 |
1011 | -0.229 |
1012 | 0 |
1013 | 0.0165 |
1014 | -0.0874 |
1015 | 0.0378 |
1016 | 0.141 |
1017 | 0 |
1018 | 0 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | -0.0487 |
1022 | -0.124 |
1023 | 0 |
1024 | -0.307 |
1025 | -0.0611 |
1026 | 0 |
1027 | -0.00273 |
1028 | 0.127 |
1029 | -0.151 |
103 | 0.404 |
1030 | 0 |
1031 | -0.195 |
1032 | -0.115 |
1033 | 0.0157 |
1034 | 0 |
1035 | 0 |
1036 | 0.106 |
1037 | 0 |
1038 | 0.112 |
1039 | -0.0843 |
104 | 0 |
1040 | 0.396 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11939
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11939
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.301 |
10 | 10 | 0.0391 |
100 | 100 | 0.788 |
101 | 101 | 0.276 |
102 | 102 | 0.0974 |
103 | 103 | 0.569 |
104 | 104 | 0.962 |
105 | 105 | 0.802 |
106 | 106 | 0.904 |
107 | 107 | 0.373 |
108 | 108 | 0.523 |
109 | 109 | 0.0698 |
11 | 11 | 0.167 |
110 | 110 | 0.0373 |
111 | 111 | 0.791 |
112 | 112 | 0.947 |
113 | 113 | 0.139 |
114 | 114 | 0.911 |
115 | 115 | 0.89 |
116 | 116 | 0.344 |
117 | 117 | 4.42548e-4 |
118 | 118 | 0.907 |
119 | 119 | 0.2 |
12 | 12 | 0.652 |
120 | 120 | 0.232 |
121 | 121 | 0.41 |
122 | 122 | 0.32 |
123 | 123 | 0.19 |
124 | 124 | 0.213 |
125 | 125 | 0.578 |
126 | 126 | 0.549 |
127 | 127 | 0.0773 |
128 | 128 | 0.228 |
129 | 129 | 0.818 |
13 | 13 | 0.0129 |
130 | 130 | 0.612 |
131 | 131 | 0.598 |
132 | 132 | 0.227 |
133 | 133 | 0.152 |
134 | 134 | 0.901 |
135 | 135 | 0.298 |
136 | 136 | 0.293 |
137 | 137 | 0.97 |
138 | 138 | 0.595 |
139 | 139 | 0.0109 |
14 | 14 | 0.428 |
140 | 140 | 0.983 |
141 | 141 | 0.725 |
142 | 142 | 0.801 |
143 | 143 | 0.206 |
144 | 144 | 0.153 |
145 | 145 | 0.266 |
146 | 146 | 0.361 |
147 | 147 | 0.516 |
148 | 148 | 0.892 |
149 | 149 | 0.0859 |
15 | 15 | 0.537 |
150 | 150 | 0.0368 |
151 | 151 | 0.942 |
152 | 152 | 0.0821 |
153 | 153 | 0.91 |
154 | 154 | 0.403 |
155 | 155 | 0.186 |
156 | 156 | 1.19319e-28 |
157 | 157 | 0.771 |
158 | 158 | 0.543 |
159 | 159 | 0.148 |
160 | 160 | 0.931 |
161 | 161 | 0.793 |
162 | 162 | 0.814 |
163 | 163 | 0.723 |
164 | 164 | 0.00481 |
165 | 165 | 0.529 |
166 | 166 | 0.82 |
167 | 167 | 0.111 |
168 | 168 | 0.265 |
169 | 169 | 0.00175 |
17 | 17 | 0.55 |
18 | 18 | 0.497 |
19 | 19 | 0.393 |
2 | 2 | 0.539 |
20 | 20 | 0.0564 |
21 | 21 | 0.0503 |
22 | 22 | 0.204 |
23 | 23 | 0.288 |
24 | 24 | 0.712 |
25 | 25 | 0.978 |
26 | 26 | 0.232 |
27 | 27 | 0.376 |
28 | 28 | 0.909 |
29 | 29 | 0.0182 |
3 | 3 | 0.261 |
30 | 30 | 0.471 |
31 | 31 | 0.282 |
32 | 32 | 0.563 |
33 | 33 | 0.277 |
34 | 34 | 0.765 |
35 | 35 | 0.138 |
36 | 36 | 0.302 |
37 | 37 | 0.0132 |
38 | 38 | 0.917 |
39 | 39 | 0.724 |
4 | 4 | 0.552 |
40 | 40 | 0.917 |
41 | 41 | 0.312 |
42 | 42 | 0.505 |
43 | 43 | 0.835 |
44 | 44 | 0.222 |
45 | 45 | 0.855 |
46 | 46 | 0.545 |
47 | 47 | 0.231 |
48 | 48 | 0.356 |
49 | 49 | 0.412 |
5 | 5 | 0.433 |
50 | 50 | 0.575 |
51 | 51 | 0.844 |
52 | 52 | 0.735 |
53 | 53 | 0.608 |
54 | 54 | 0.313 |
55 | 55 | 0.779 |
56 | 56 | 0.57 |
57 | 57 | 0.409 |
58 | 58 | 0.826 |
59 | 59 | 0.445 |
6 | 6 | 0.844 |
60 | 60 | 0.445 |
61 | 61 | 0.922 |
62 | 62 | 0.555 |
63 | 63 | 0.742 |
64 | 64 | 0.666 |
65 | 65 | 0.844 |
66 | 66 | 0.477 |
67 | 67 | 0.278 |
68 | 68 | 0.251 |
69 | 69 | 0.863 |
7 | 7 | 0.247 |
70 | 70 | 0.0477 |
71 | 71 | 0.00954 |
72 | 72 | 0.785 |
73 | 73 | 0.0094 |
74 | 74 | 0.813 |
75 | 75 | 0.0975 |
76 | 76 | 0.485 |
77 | 77 | 0.344 |
78 | 78 | 0.0108 |
79 | 79 | 0.713 |
8 | 8 | 0.639 |
80 | 80 | 0.0124 |
81 | 81 | 0.887 |
82 | 82 | 0.512 |
83 | 83 | 0.767 |
84 | 84 | 0.794 |
85 | 85 | 0.996 |
86 | 86 | 0.791 |
87 | 87 | 0.0191 |
88 | 88 | 0.384 |
89 | 89 | 0.262 |
9 | 9 | 0.67 |
90 | 90 | 0.0552 |
91 | 91 | 0.943 |
92 | 92 | 0.544 |
93 | 93 | 0.245 |
94 | 94 | 0.751 |
95 | 95 | 0.0121 |
96 | 96 | 0.749 |
97 | 97 | 0.384 |
98 | 98 | 0.248 |
99 | 99 | 0.746 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11939
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000488 mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000350 (experimentally modified sample)
0000404 (mouse mesenchymal stem cell line: ST2 sample)
0000333 (medium change sample)
0000357 (0 hr sample)
0000488 (mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)