FFCP PHASE2:Hg19::chr10:72432309..72432328,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:140766 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14899 |TSScl...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=140766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14899 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8WXS8,Q5T4G1 | ||
|association_with_transcript=-230bp_to_ENST00000373207,ENST00000373208,NM_080722,NM_139155,uc001jrg.2,uc001jrh.2_5end | |association_with_transcript=-230bp_to_ENST00000373207,ENST00000373208,NM_080722,NM_139155,uc001jrg.2,uc001jrh.2_5end | ||
|cluster_id=chr10:72432309..72432328,+ | |cluster_id=chr10:72432309..72432328,+ | ||
Latest revision as of 02:42, 19 September 2015
| Short description: | p2@ADAMTS14 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ADAMTS14_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -230bp_to_ENST00000373207, ENST00000373208, NM_080722, NM_139155, uc001jrg.2, uc001jrh.2_5end |
| EntrezGene: | ADAMTS14 |
| HGNC: | 14899 |
| UniProt: | Q8WXS8Q5T4G1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ADAMTS14 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiac mesenchymal cell | 2.52e-10 | 4 |
| migratory trunk neural crest cell | 2.52e-10 | 4 |
| vascular associated smooth muscle cell | 1.17e-08 | 32 |
| aortic smooth muscle cell | 6.13e-08 | 10 |
| smooth muscle cell | 7.37e-08 | 43 |
| smooth muscle myoblast | 7.37e-08 | 43 |
| smooth muscle cell of the brain vasculature | 2.59e-07 | 3 |
| muscle precursor cell | 9.86e-07 | 58 |
| myoblast | 9.86e-07 | 58 |
| multi-potent skeletal muscle stem cell | 9.86e-07 | 58 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| blood vessel smooth muscle | 6.13e-08 | 10 |
| arterial system smooth muscle | 6.13e-08 | 10 |
| artery smooth muscle tissue | 6.13e-08 | 10 |
| aorta smooth muscle tissue | 6.13e-08 | 10 |
| dense mesenchyme tissue | 8.26e-08 | 73 |
| somite | 3.79e-07 | 71 |
| presomitic mesoderm | 3.79e-07 | 71 |
| presumptive segmental plate | 3.79e-07 | 71 |
| dermomyotome | 3.79e-07 | 71 |
| trunk paraxial mesoderm | 3.79e-07 | 71 |
Showing 1 to 10 of 16 entries
