FFCP PHASE1:Mm9::chr18:34381287..34381313,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:34381287..34381313,-
|short_description=p1@Gm10548
|description=CAGE_peak_1_at_Gm10548_5end
|association_with_transcript=112bp_to_ENSMUST00000097631,NR_04...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=633395 | |EntrezGene=633395 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENSMUST00000097631,NR_040534,uc008ekc.1_5end | |||
|cluster_id=chr18:34381287..34381313,- | |||
|description=CAGE_peak_1_at_Gm10548_5end | |||
|id=chr18:34381287..34381313,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.85e-10,29;UBERON:0005057,5.85e-10,29;UBERON:0001004,2.62e-09,42;UBERON:0000065,6.84e-09,41;UBERON:0003408,1.26e-08,24;UBERON:0002370,3.50e-08,23;UBERON:0000974,3.50e-08,23;UBERON:0004807,3.50e-08,23;UBERON:0005058,3.50e-08,23;UBERON:0003351,3.50e-08,23;UBERON:0009113,3.50e-08,23;UBERON:0003295,3.50e-08,23;UBERON:0009722,3.50e-08,23;UBERON:0005562,3.50e-08,23;UBERON:0007690,3.50e-08,23;UBERON:0000077,3.78e-08,35;UBERON:0006562,1.26e-07,24;UBERON:0001557,1.26e-07,24;UBERON:0001042,1.26e-07,24;UBERON:0008814,1.26e-07,24;UBERON:0009145,1.26e-07,24;UBERON:0002193,2.08e-07,48;UBERON:0002405,2.08e-07,48;UBERON:0002390,2.11e-07,45;UBERON:0003061,2.11e-07,45 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0,0,1.16210991097419,0.563154888606667,0.234064526321993,0.513653904676515,0,7.53283211697305,1.48614684112296,0.999329285446988,1.41732687172878,0,5.67831897644828,5.75880621144103,2.54633791078818,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0.577703239502549,0,0.408338712524738,0.837063261473815,0,0.523523743973798,0,1.36609096991689,0,0.125896817975577,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,2.01339127269284,4.35217285206807,5.04140698713696,1.02903774414379,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,0.630974884054146,0.856952953211411,0.662605622854841,0.489963196859816,0.958454710182364,0,0,0.893811366596314,1.38245879930619,0.527545150920775,0.548925861614458,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.711858403995515,1.1183966749518,0.832988126665025,0.755715601067855,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,6.73238497482646,0.445326417194474,0.173485326766136,0.608930956624282,0.922461989024234,0.753613202763113,0.470354828542819,0.251333182659351,0,0.578397427679647,0,1.29413479957927,0.441683036920787,0,0,0,1.25668024088073,0.510914110417183,0.359445373517761,0,0.381210681219194,0.449371918214468,1.83000241127451,2.01046963380583,1.56441888173049,2.30143911597297,0.41557608911912,1.1356888414743,0.712875546952214,1.11966273549084,0.252722758433675,0.420883711772948,0.780722657776222,0,0.720248519221397,1.20563854268572,0.476255494059295,1.2811372028485,0.374806898238915,0.517406741478031,0.431135985865684,2.08016688184601,0.175951124163949,0.876782929710299,1.11218899690239,1.39300866608867,0.823128545631774,0.796137067273973,0.702213187313235,0.257347907114715,0,1.03562886267751,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,0.462801338662135,1.39520366850245,0.804820204198858,1.16765342367169,1.15191894939436,1.64167464079095,1.21603214318784,1.16959989940266,1.09775057645525,0.939444931322602,2.3131894342054,0.617427674275707,0.330418782983798,0,0.853153002140936,0.232236671860439,0.77320476793256,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,0.379419222745544,0.295220295959204,0.470996183524124,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,1.2731292589071,1.43848068725405,0.810676133875177,0.549122826376163,0,1.48856379067401,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,1.84753190166605,0.37898282354097,0.488894929326078,1.52770577197669,0.704070744865506,1.34005005953453,0.952174563544055,0.585400943573396,1.7339865851681,1.7717175171902,1.2756381492599,2.13022309130459,1.55416483679306,1.15719246865209,0,0,3.44234991113325,0.827810238914197,2.24770825982909,1.17211686592203,0.491804836130026,0.757412781613119,0.94652465824877,1.56175497718655,0.215423397732799,0.238968797952552,1.33679204449436,1.13230612315533,0,0.876767573733936,0,2.89189184779626,1.41940085208269,0.534196811001766,0.81443479676788,0.659880491890142,2.65490276679926,0.485561272309963,0.906970670894253,0.754420319023592,0.885905678642318,0.922305443831782,1.29214146584111,0,1.06949213515416,1.58018378967908,0,0,0.680879211507576,1.26042765821917,0.517434735131018,0.643011105094777,0.532020700926821,1.42695054081656,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.661585194164886,0.65954501176592,0.807322133479528,0.904693873922338,0.716234064018819,0.492422699235184,0.582961673259701,1.11255181206306,1.19609616558497,1.03193433981611,0.925972636848558,1.50694765603753,1.91371918809435,1.14389086603261,0.339956859987711,0.559805809294632,0.690999869022119,0.954670618015114,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.578574190077352,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.469428954583016,0.39061315453185,0.524296722128554,0,0,8.53230025696081,1.01362607645082,1.02710957164827,1.03936658382236,1.61124026100733,4.17230845040656,4.08664528367894,2.65841148914239,4.74542314756294,4.19137436602499,4.63800451629466,7.60171469770069,6.06134602334076,6.66198342434943,0.680191150845634,0.221985953374065,0.269141569828427,0,0.579568782096571,0.93841237725591,0.915758121336325,0,1.00314420807073,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,0,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,0,1.3492355185943,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,1.15245274328765,0.861532034334199,1.90517476513229,0.695305955669133,0.964546102318525,0.412085900803307,0.735994600671987,1.02860775715625,1.24233064311536,0.238436189947321,1.16277133305863,1.03520318456864,1.09998990259179,1.28049581010941,1.57841826862706,0.679020569229309,1.68342681497322,0.711810108745045,0.689531376628944,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0.661774257358546,0.695603506861264 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0,0,1.16210991097419,0.563154888606667,0.234064526321993,0.513653904676515,0,7.53283211697305,1.48614684112296,0.999329285446988,1.41732687172878,0,5.67831897644828,5.75880621144103,2.54633791078818,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0.577703239502549,0,0.408338712524738,0.837063261473815,0,0.523523743973798,0,1.36609096991689,0,0.125896817975577,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,2.01339127269284,4.35217285206807,5.04140698713696,1.02903774414379,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,0.630974884054146,0.856952953211411,0.662605622854841,0.489963196859816,0.958454710182364,0,0,0.893811366596314,1.38245879930619,0.527545150920775,0.548925861614458,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.711858403995515,1.1183966749518,0.832988126665025,0.755715601067855,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,6.73238497482646,0.445326417194474,0.173485326766136,0.608930956624282,0.922461989024234,0.753613202763113,0.470354828542819,0.251333182659351,0,0.578397427679647,0,1.29413479957927,0.441683036920787,0,0,0,1.25668024088073,0.510914110417183,0.359445373517761,0,0.381210681219194,0.449371918214468,1.83000241127451,2.01046963380583,1.56441888173049,2.30143911597297,0.41557608911912,1.1356888414743,0.712875546952214,1.11966273549084,0.252722758433675,0.420883711772948,0.780722657776222,0,0.720248519221397,1.20563854268572,0.476255494059295,1.2811372028485,0.374806898238915,0.517406741478031,0.431135985865684,2.08016688184601,0.175951124163949,0.876782929710299,1.11218899690239,1.39300866608867,0.823128545631774,0.796137067273973,0.702213187313235,0.257347907114715,0,1.03562886267751,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,0.462801338662135,1.39520366850245,0.804820204198858,1.16765342367169,1.15191894939436,1.64167464079095,1.21603214318784,1.16959989940266,1.09775057645525,0.939444931322602,2.3131894342054,0.617427674275707,0.330418782983798,0,0.853153002140936,0.232236671860439,0.77320476793256,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,0.379419222745544,0.295220295959204,0.470996183524124,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,1.2731292589071,1.43848068725405,0.810676133875177,0.549122826376163,0,1.48856379067401,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,1.84753190166605,0.37898282354097,0.488894929326078,1.52770577197669,0.704070744865506,1.34005005953453,0.952174563544055,0.585400943573396,1.7339865851681,1.7717175171902,1.2756381492599,2.13022309130459,1.55416483679306,1.15719246865209,0,0,3.44234991113325,0.827810238914197,2.24770825982909,1.17211686592203,0.491804836130026,0.757412781613119,0.94652465824877,1.56175497718655,0.215423397732799,0.238968797952552,1.33679204449436,1.13230612315533,0,0.876767573733936,0,2.89189184779626,1.41940085208269,0.534196811001766,0.81443479676788,0.659880491890142,2.65490276679926,0.485561272309963,0.906970670894253,0.754420319023592,0.885905678642318,0.922305443831782,1.29214146584111,0,1.06949213515416,1.58018378967908,0,0,0.680879211507576,1.26042765821917,0.517434735131018,0.643011105094777,0.532020700926821,1.42695054081656,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.661585194164886,0.65954501176592,0.807322133479528,0.904693873922338,0.716234064018819,0.492422699235184,0.582961673259701,1.11255181206306,1.19609616558497,1.03193433981611,0.925972636848558,1.50694765603753,1.91371918809435,1.14389086603261,0.339956859987711,0.559805809294632,0.690999869022119,0.954670618015114,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.578574190077352,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.469428954583016,0.39061315453185,0.524296722128554,0,0,8.53230025696081,1.01362607645082,1.02710957164827,1.03936658382236,1.61124026100733,4.17230845040656,4.08664528367894,2.65841148914239,4.74542314756294,4.19137436602499,4.63800451629466,7.60171469770069,6.06134602334076,6.66198342434943,0.680191150845634,0.221985953374065,0.269141569828427,0,0.579568782096571,0.93841237725591,0.915758121336325,0,1.00314420807073,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,0,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,0,1.3492355185943,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,1.15245274328765,0.861532034334199,1.90517476513229,0.695305955669133,0.964546102318525,0.412085900803307,0.735994600671987,1.02860775715625,1.24233064311536,0.238436189947321,1.16277133305863,1.03520318456864,1.09998990259179,1.28049581010941,1.57841826862706,0.679020569229309,1.68342681497322,0.711810108745045,0.689531376628944,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0.661774257358546,0.695603506861264 | ||
|short_description=p1@Gm10548 | |||
}} | }} |
Latest revision as of 04:07, 27 September 2015
Short description: | p1@Gm10548 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10548_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 112bp_to_ENSMUST00000097631, NR_040534, uc008ekc.1_5end |
EntrezGene: | Gm10548 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.85e-10 | 29 |
immune organ | 5.85e-10 | 29 |
respiratory system | 2.62e-09 | 42 |
respiratory tract | 6.84e-09 | 41 |
gland of gut | 1.26e-08 | 24 |
thymus | 3.50e-08 | 23 |
neck | 3.50e-08 | 23 |
respiratory system epithelium | 3.50e-08 | 23 |
hemolymphoid system gland | 3.50e-08 | 23 |
pharyngeal epithelium | 3.50e-08 | 23 |
thymic region | 3.50e-08 | 23 |
pharyngeal gland | 3.50e-08 | 23 |
entire pharyngeal arch endoderm | 3.50e-08 | 23 |
thymus primordium | 3.50e-08 | 23 |
early pharyngeal endoderm | 3.50e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 3.78e-08 | 35 |
pharynx | 1.26e-07 | 24 |
upper respiratory tract | 1.26e-07 | 24 |
chordate pharynx | 1.26e-07 | 24 |
pharyngeal arch system | 1.26e-07 | 24 |
pharyngeal region of foregut | 1.26e-07 | 24 |
hemolymphoid system | 2.08e-07 | 48 |
immune system | 2.08e-07 | 48 |
hematopoietic system | 2.11e-07 | 45 |
blood island | 2.11e-07 | 45 |