FFCP PHASE1:Mm9::chr18:61168205..61168209,-: Difference between revisions
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|id=chr18:61168205..61168209,-
|short_description=p@chr18:61168205..61168209,-
|description=CAGE_peak_at_chr18:61168205..61168209,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2124 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:61168205..61168209,- | |||
|description=CAGE_peak_at_chr18:61168205..61168209,- | |||
|id=chr18:61168205..61168209,- | |||
|ontology_enrichment_celltype=CL:0000117!1.86e-36!23;CL:0000337!1.86e-36!23;CL:0000540!9.15e-32!33;CL:0000047!9.15e-32!33;CL:0000031!9.15e-32!33;CL:0000404!9.15e-32!33;CL:0000393!9.01e-30!39;CL:0000211!9.01e-30!39;CL:0002319!1.09e-23!43;CL:0000221!4.39e-23!44;CL:0000133!4.39e-23!44;CL:0000055!1.53e-22!50;CL:0002321!4.43e-17!70;CL:0000220!4.43e-17!70;CL:0002614!4.54e-13!3;CL:0002612!5.98e-13!3;CL:0000723!2.22e-12!91;CL:0000048!2.22e-12!91;CL:0000034!2.09e-11!97;CL:0000548!2.81e-10!115;CL:0000004!2.81e-10!115;CL:0000255!2.81e-10!115;CL:0002371!6.30e-10!118;CL:0000144!1.36e-09!121;CL:0000012!1.36e-09!121;CL:0002611!1.35e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.99e-20,3;CL:0002614,1.99e-20,3;CL:0000117,3.15e-16,23;CL:0000337,3.15e-16,23;CL:0000540,1.86e-11,33;CL:0000047,1.86e-11,33;CL:0000031,1.86e-11,33;CL:0000404,1.86e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!6.91e-20!5;UBERON:0002315!6.91e-20!5;UBERON:0002240!1.51e-16!6;UBERON:0005174!1.51e-16!6;UBERON:0001137!1.51e-16!6;UBERON:0002038!4.54e-13!3;UBERON:0002308!4.54e-13!3;UBERON:0009663!4.54e-13!3;UBERON:0009661!4.54e-13!3;UBERON:0006331!4.54e-13!3;UBERON:0000125!4.54e-13!3;UBERON:0002257!5.98e-13!3;UBERON:0001017!1.05e-12!73;UBERON:0005743!1.05e-12!73;UBERON:0002420!1.25e-12!8;UBERON:0007245!1.25e-12!8;UBERON:0010009!1.25e-12!8;UBERON:0010011!1.25e-12!8;UBERON:0000454!1.25e-12!8;UBERON:0002020!2.50e-12!34;UBERON:0000073!2.76e-12!75;UBERON:0001016!2.76e-12!75;UBERON:0002950!6.44e-10!4;UBERON:0001891!6.44e-10!4;UBERON:0009616!6.44e-10!4;UBERON:0002256!1.35e-08!2;UBERON:0004121!3.29e-08!102;UBERON:0000924!3.29e-08!102;UBERON:0006601!3.29e-08!102;UBERON:0003076!3.63e-08!12;UBERON:0003057!3.63e-08!12;UBERON:0001049!2.10e-07!52;UBERON:0005068!2.10e-07!52;UBERON:0006241!2.10e-07!52;UBERON:0007135!2.10e-07!52;UBERON:0002298!9.57e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.99e-20,3;UBERON:0009663,1.99e-20,3;UBERON:0009661,1.99e-20,3;UBERON:0000125,1.99e-20,3;UBERON:0002308,1.99e-20,3;UBERON:0002257,1.99e-20,3;UBERON:0002950,1.34e-15,4;UBERON:0001891,1.34e-15,4;UBERON:0009616,1.34e-15,4;UBERON:0010286,1.34e-15,4;UBERON:0001948,1.08e-12,5;UBERON:0002315,1.08e-12,5;UBERON:0002240,9.54e-11,6;UBERON:0005174,9.54e-11,6;UBERON:0001137,9.54e-11,6;UBERON:0002420,2.66e-08,8;UBERON:0007245,2.66e-08,8;UBERON:0010009,2.66e-08,8;UBERON:0010011,2.66e-08,8;UBERON:0000454,2.66e-08,8;UBERON:0002020,2.01e-07,34;UBERON:0000073,3.79e-07,54 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,1.0214987046815,0.768032666281217,0.923204014111357,0.457438218012048,0,0.558365998002762,2.8138130501584,1.06958773443767,1.17851434189467,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,1.0214987046815,0.768032666281217,0.923204014111357,0.457438218012048,0,0.558365998002762,2.8138130501584,1.06958773443767,1.17851434189467,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:61168205..61168209,- | |||
}} | }} |
Latest revision as of 23:19, 5 August 2015
Short description: | p@chr18:61168205..61168209, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:61168205..61168209, - |
Coexpression cluster: | MCL_coexpression_mm9:2124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.99e-20 | 3 |
neuron of the substantia nigra | 1.99e-20 | 3 |
CNS neuron (sensu Vertebrata) | 3.15e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-16 | 23 |
neuron | 1.86e-11 | 33 |
neuronal stem cell | 1.86e-11 | 33 |
neuroblast | 1.86e-11 | 33 |
electrically signaling cell | 1.86e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.89e-09 | 43 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.99e-20 | 3 |
telencephalic nucleus | 1.99e-20 | 3 |
midbrain nucleus | 1.99e-20 | 3 |
neural nucleus | 1.99e-20 | 3 |
nucleus of brain | 1.99e-20 | 3 |
ventral horn of spinal cord | 1.99e-20 | 3 |
regional part of midbrain | 1.34e-15 | 4 |
midbrain | 1.34e-15 | 4 |
presumptive midbrain | 1.34e-15 | 4 |
midbrain neural tube | 1.34e-15 | 4 |
regional part of spinal cord | 1.08e-12 | 5 |
gray matter of spinal cord | 1.08e-12 | 5 |
spinal cord | 9.54e-11 | 6 |
dorsal region element | 9.54e-11 | 6 |
dorsum | 9.54e-11 | 6 |
basal ganglion | 2.66e-08 | 8 |
nuclear complex of neuraxis | 2.66e-08 | 8 |
aggregate regional part of brain | 2.66e-08 | 8 |
collection of basal ganglia | 2.66e-08 | 8 |
cerebral subcortex | 2.66e-08 | 8 |
gray matter | 2.01e-07 | 34 |
regional part of nervous system | 3.79e-07 | 54 |