FFCP PHASE1:Mm9::chr19:42820294..42820305,+: Difference between revisions
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|id=chr19:42820294..42820305,+
|short_description=p@chr19:42820294..42820305,+
|description=CAGE_peak_at_chr19:42820294..42820305,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42820294..42820305,+ | |||
|description=CAGE_peak_at_chr19:42820294..42820305,+ | |||
|id=chr19:42820294..42820305,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.11e-12!9;CL:0002251!2.11e-12!9;CL:0000239!1.29e-07!6;CL:0000677!1.29e-07!6;CL:0000212!1.29e-07!6;CL:0000584!1.29e-07!6;CL:0000066!7.37e-07!25;CL:0002076!9.71e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.19e-25,9;CL:0002251,2.19e-25,9;CL:0000066,4.73e-18,25;CL:0000682,1.16e-15,3;CL:0002250,2.04e-15,3;CL:0002076,5.36e-15,15;CL:0000239,9.48e-13,6;CL:0000677,9.48e-13,6;CL:0000584,9.48e-13,6;CL:0000223,4.36e-11,20;CL:0000075,5.81e-11,7;CL:0000473,5.34e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.05e-19!15;UBERON:0001242!5.22e-16!13;UBERON:0000060!5.22e-16!13;UBERON:0001262!5.22e-16!13;UBERON:0004786!5.22e-16!13;UBERON:0004923!2.01e-12!24;UBERON:0003350!2.11e-12!9;UBERON:0004808!2.11e-12!9;UBERON:0001277!2.11e-12!9;UBERON:0000485!8.07e-10!11;UBERON:0003101!2.22e-08!16;UBERON:0000079!2.22e-08!16;UBERON:0005156!7.07e-08!26;UBERON:0000990!7.07e-08!26;UBERON:0006554!7.55e-08!16;UBERON:0002113!1.95e-07!14;UBERON:0003918!1.95e-07!14;UBERON:0005095!1.95e-07!14;UBERON:0007687!1.95e-07!14;UBERON:0003135!2.48e-07!15;UBERON:0001008!2.88e-07!17;UBERON:0000080!2.92e-07!4;UBERON:0005904!2.92e-07!4;UBERON:0006947!2.92e-07!4;UBERON:0002120!2.92e-07!4;UBERON:0004054!2.92e-07!4;UBERON:0004875!2.92e-07!4;UBERON:0004876!2.92e-07!4;UBERON:0005721!2.92e-07!4;UBERON:0005754!2.92e-07!4;UBERON:0007297!2.92e-07!4;UBERON:0000160!7.22e-07!43;UBERON:0000331!7.69e-07!3;UBERON:0002116!7.69e-07!3;UBERON:0001204!7.69e-07!3;UBERON:0001168!7.69e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.34e-46,15;UBERON:0001242,2.03e-36,13;UBERON:0001262,2.03e-36,13;UBERON:0004786,2.03e-36,13;UBERON:0004923,5.00e-28,24;UBERON:0003350,2.19e-25,9;UBERON:0004808,2.19e-25,9;UBERON:0001277,2.19e-25,9;UBERON:0000485,1.14e-20,11;UBERON:0000160,1.44e-17,31;UBERON:0000331,2.30e-16,3;UBERON:0002116,2.30e-16,3;UBERON:0001204,2.30e-16,3;UBERON:0001168,2.30e-16,3;UBERON:0002108,2.07e-12,4;UBERON:0001962,2.46e-11,2;UBERON:0001961,2.46e-11,2;UBERON:0001744,2.46e-11,2;UBERON:0005409,4.74e-11,47;UBERON:0002465,7.74e-08,3;UBERON:0001301,1.53e-07,3;UBERON:0006555,1.53e-07,3;UBERON:0005103,1.53e-07,3;UBERON:0000083,1.53e-07,3;UBERON:0009201,1.53e-07,3;UBERON:0004819,1.53e-07,3;UBERON:0006553,1.53e-07,3;UBERON:0003074,1.53e-07,3;UBERON:0003060,1.53e-07,3 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0,1.50268718983904,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.23989391910769,2.98232065387321,2.29692785646008,1.29228598847722,2.80112602491656,3.80046838912748,4.78857246543868,2.21730510655305,0,0,0,1.73310971850765,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.49288364732112,2.27450482590307,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,1.04692622291808,0.909998478779072,0,1.50268718983904,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.23989391910769,2.98232065387321,2.29692785646008,1.29228598847722,2.80112602491656,3.80046838912748,4.78857246543868,2.21730510655305,0,0,0,1.73310971850765,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.49288364732112,2.27450482590307,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr19:42820294..42820305,+ | |||
}} | }} |
Latest revision as of 03:14, 4 August 2015
Short description: | p@chr19:42820294..42820305, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42820294..42820305, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.19e-25 | 9 |
epithelial cell of alimentary canal | 2.19e-25 | 9 |
epithelial cell | 4.73e-18 | 25 |
M cell of gut | 1.16e-15 | 3 |
intestinal crypt stem cell | 2.04e-15 | 3 |
endo-epithelial cell | 5.36e-15 | 15 |
brush border epithelial cell | 9.48e-13 | 6 |
gut absorptive cell | 9.48e-13 | 6 |
enterocyte | 9.48e-13 | 6 |
endodermal cell | 4.36e-11 | 20 |
columnar/cuboidal epithelial cell | 5.81e-11 | 7 |
defensive cell | 5.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.34e-46 | 15 |
intestinal mucosa | 2.03e-36 | 13 |
wall of intestine | 2.03e-36 | 13 |
gastrointestinal system mucosa | 2.03e-36 | 13 |
organ component layer | 5.00e-28 | 24 |
epithelium of mucosa | 2.19e-25 | 9 |
gastrointestinal system epithelium | 2.19e-25 | 9 |
intestinal epithelium | 2.19e-25 | 9 |
simple columnar epithelium | 1.14e-20 | 11 |
intestine | 1.44e-17 | 31 |
ileal mucosa | 2.30e-16 | 3 |
ileum | 2.30e-16 | 3 |
mucosa of small intestine | 2.30e-16 | 3 |
wall of small intestine | 2.30e-16 | 3 |
small intestine | 2.07e-12 | 4 |
gut-associated lymphoid tissue | 2.46e-11 | 2 |
mucosa-associated lymphoid tissue | 2.46e-11 | 2 |
lymphoid tissue | 2.46e-11 | 2 |
gastrointestinal system | 4.74e-11 | 47 |
lymphoid system | 7.74e-08 | 3 |
epididymis | 1.53e-07 | 3 |
excretory tube | 1.53e-07 | 3 |
mesonephric epithelium | 1.53e-07 | 3 |
mesonephric tubule | 1.53e-07 | 3 |
nephric duct | 1.53e-07 | 3 |
kidney epithelium | 1.53e-07 | 3 |
renal duct | 1.53e-07 | 3 |
mesonephric duct | 1.53e-07 | 3 |
pronephric duct | 1.53e-07 | 3 |