FFCP PHASE1:Mm9::chr19:54120233..54120243,+: Difference between revisions
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|id=chr19:54120233..54120243,+
|short_description=p4@Adra2a
|description=CAGE_peak_4_at_Adra2a_5end
|association_with_transcript=483bp_to_uc008hxi.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11551 | |EntrezGene=11551 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=Q1HL33 | |UniProt=Q1HL33 | ||
|association_with_transcript=483bp_to_uc008hxi.1_5end | |||
|cluster_id=chr19:54120233..54120243,+ | |||
|description=CAGE_peak_4_at_Adra2a_5end | |||
|id=chr19:54120233..54120243,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,4.77e-30,2;CL:0000151,1.99e-20,3;CL:0000499,1.99e-20,3;CL:0000327,1.99e-20,3;CL:0002603,9.17e-09,2;CL:0000878,1.81e-08,2;CL:0000129,1.81e-08,2;CL:0002453,2.66e-08,8;CL:0000333,7.98e-07,10;CL:0000095,7.98e-07,10;CL:0000243,7.98e-07,10;CL:0000123,7.98e-07,10;CL:0000125,7.98e-07,10;CL:0000030,7.98e-07,10;CL:0000339,7.98e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.77e-30,2;UBERON:0004733,1.07e-10,6;UBERON:0004732,1.07e-10,6;UBERON:0002028,1.07e-10,6;UBERON:0007277,1.07e-10,6;UBERON:0001896,2.13e-08,2;UBERON:0002298,2.13e-08,2;UBERON:0005290,2.13e-08,2;UBERON:0010096,2.13e-08,2 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,41.4667412504461,0.218025156380447,0.219686182734472,0,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,3.72728985276045,2.66788438833342,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.648965052271031,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.807322133479528,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6292192521702,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.256100609619477,0.114870937911227,0.476293691283074,0.347652977834566,0,0.412085900803307,0,0.342869252385415,0,0,0,0.376437521661322,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0,0.956441660344217,0.220591419119515,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,41.4667412504461,0.218025156380447,0.219686182734472,0,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,3.72728985276045,2.66788438833342,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.648965052271031,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.807322133479528,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6292192521702,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.256100609619477,0.114870937911227,0.476293691283074,0.347652977834566,0,0.412085900803307,0,0.342869252385415,0,0,0,0.376437521661322,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0,0.956441660344217,0.220591419119515,0 | ||
|short_description=p4@Adra2a | |||
}} | }} |
Latest revision as of 23:28, 25 September 2015
Short description: | p4@Adra2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Adra2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | 483bp_to_uc008hxi.1_5end |
EntrezGene: | Adra2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 4.77e-30 | 2 |
secretory cell | 1.99e-20 | 3 |
stromal cell | 1.99e-20 | 3 |
extracellular matrix secreting cell | 1.99e-20 | 3 |
astrocyte of the cerebellum | 9.17e-09 | 2 |
central nervous system macrophage | 1.81e-08 | 2 |
microglial cell | 1.81e-08 | 2 |
oligodendrocyte precursor cell | 2.66e-08 | 8 |
migratory neural crest cell | 7.98e-07 | 10 |
neuron associated cell | 7.98e-07 | 10 |
glial cell (sensu Vertebrata) | 7.98e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.98e-07 | 10 |
glial cell | 7.98e-07 | 10 |
glioblast | 7.98e-07 | 10 |
glioblast (sensu Vertebrata) | 7.98e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 4.77e-30 | 2 |
segmental subdivision of hindbrain | 1.07e-10 | 6 |
segmental subdivision of nervous system | 1.07e-10 | 6 |
hindbrain | 1.07e-10 | 6 |
presumptive hindbrain | 1.07e-10 | 6 |
medulla oblongata | 2.13e-08 | 2 |
brainstem | 2.13e-08 | 2 |
myelencephalon | 2.13e-08 | 2 |
future myelencephalon | 2.13e-08 | 2 |