FFCP PHASE2:Hg19::chr1:183622379..183622388,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:403314 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32152 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=403314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=32152 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8WW27 | ||
|association_with_transcript=59bp_to_ENST00000308641,NM_203454,uc001gqn.2_5end | |association_with_transcript=59bp_to_ENST00000308641,NM_203454,uc001gqn.2_5end | ||
|cluster_id=chr1:183622379..183622388,- | |cluster_id=chr1:183622379..183622388,- |
Latest revision as of 03:58, 19 September 2015
Short description: | p4@APOBEC4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOBEC4_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 59bp_to_ENST00000308641, NM_203454, uc001gqn.2_5end |
EntrezGene: | APOBEC4 |
HGNC: | 32152 |
UniProt: | Q8WW27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@APOBEC4 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 2.55e-98 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.55e-98 | 1 |
mature CD4 single-positive thymocyte | 2.55e-98 | 1 |
resting double-positive thymocyte | 2.55e-98 | 1 |
double-positive blast | 2.55e-98 | 1 |
CD69-positive double-positive thymocyte | 2.55e-98 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.55e-98 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.55e-98 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.55e-98 | 1 |
thymocyte | 4.52e-50 | 2 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-50 | 2 |
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
hemopoietic organ | 1.91e-15 | 7 |
Showing 1 to 10 of 23 entries