FFCP PHASE1:Hg19::chr2:47596386..47596392,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11529 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P16422 | ||
|association_with_transcript=99bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | |association_with_transcript=99bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | ||
|cluster_id=chr2:47596386..47596392,+ | |cluster_id=chr2:47596386..47596392,+ |
Latest revision as of 12:05, 17 September 2015
Short description: | p7@EPCAM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EPCAM_5end |
Coexpression cluster: | C4235_nonsmall_endometrial_colon_small_tubular_argyrophil_Prostate |
Association with transcript: | 99bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | P16422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@EPCAM |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.51e-18 | 7 |
germ cell | 4.51e-18 | 7 |
epithelial cell | 3.18e-14 | 253 |
endodermal cell | 1.56e-09 | 58 |
kidney tubule cell | 3.99e-09 | 10 |
nephron tubule epithelial cell | 3.99e-09 | 10 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
intestine | 1.99e-15 | 17 |
gastrointestinal system | 1.50e-12 | 25 |
subdivision of digestive tract | 4.29e-12 | 118 |
digestive system | 5.77e-12 | 145 |
digestive tract | 5.77e-12 | 145 |
primitive gut | 5.77e-12 | 145 |
endo-epithelium | 2.37e-10 | 82 |
endoderm-derived structure | 2.95e-10 | 160 |
endoderm | 2.95e-10 | 160 |
presumptive endoderm | 2.95e-10 | 160 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.61e-30 | 106 |
cell type cancer | 4.46e-25 | 143 |
adenocarcinoma | 7.90e-16 | 25 |
cancer | 8.65e-13 | 235 |
disease of cellular proliferation | 2.40e-12 | 239 |
tubular adenocarcinoma | 2.92e-08 | 2 |
signet ring cell adenocarcinoma | 4.87e-08 | 2 |
disease of anatomical entity | 1.92e-07 | 39 |
Showing 1 to 8 of 8 entries