FFCP PHASE2:Hg19::chr3:9811595..9811666,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8536 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1459 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1459 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q14012,F8W6S9 | ||
|association_with_transcript=0bp_to_ENST00000256460,ENST00000397277,uc003bst.2,uc003bsu.2_5end | |association_with_transcript=0bp_to_ENST00000256460,ENST00000397277,uc003bst.2,uc003bsu.2_5end | ||
|cluster_id=chr3:9811595..9811666,- | |cluster_id=chr3:9811595..9811666,- | ||
Latest revision as of 21:37, 19 September 2015
| Short description: | p1@CAMK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CAMK1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000256460, ENST00000397277, uc003bst.2, uc003bsu.2_5end |
| EntrezGene: | CAMK1 |
| HGNC: | 1459 |
| UniProt: | Q14012F8W6S9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CAMK1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage dendritic cell progenitor | 1.96e-08 | 61 |
| myeloid leukocyte | 2.57e-08 | 72 |
| monopoietic cell | 5.63e-08 | 59 |
| monocyte | 5.63e-08 | 59 |
| monoblast | 5.63e-08 | 59 |
| promonocyte | 5.63e-08 | 59 |
| granulocyte monocyte progenitor cell | 7.14e-08 | 67 |
| intermediate monocyte | 3.57e-07 | 9 |
| CD14-positive, CD16-positive monocyte | 3.57e-07 | 9 |
| myeloid lineage restricted progenitor cell | 3.79e-07 | 66 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| developing anatomical structure | 2.48e-20 | 581 |
| embryo | 2.59e-19 | 592 |
| tube | 8.15e-19 | 192 |
| germ layer | 2.56e-17 | 560 |
| germ layer / neural crest | 2.56e-17 | 560 |
| embryonic tissue | 2.56e-17 | 560 |
| presumptive structure | 2.56e-17 | 560 |
| germ layer / neural crest derived structure | 2.56e-17 | 560 |
| epiblast (generic) | 2.56e-17 | 560 |
| adult organism | 4.28e-17 | 114 |
Showing 1 to 10 of 69 entries
