FFCP PHASE2:Hg19::chr5:175964245..175964273,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:22838 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19180 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19180 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=D6RAW5 | ||
|association_with_transcript=23bp_to_ENST00000504160_5end | |association_with_transcript=23bp_to_ENST00000504160_5end | ||
|cluster_id=chr5:175964245..175964273,- | |cluster_id=chr5:175964245..175964273,- |
Latest revision as of 04:30, 17 September 2015
Short description: | p6@RNF44 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@RNF44 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lymphoid lineage restricted progenitor cell | 1.13e-09 | 52 |
lymphocyte | 3.92e-09 | 53 |
common lymphoid progenitor | 3.92e-09 | 53 |
T cell | 5.01e-08 | 25 |
pro-T cell | 5.01e-08 | 25 |
epithelial cell | 7.48e-08 | 253 |
mature alpha-beta T cell | 2.93e-07 | 18 |
alpha-beta T cell | 2.93e-07 | 18 |
immature T cell | 2.93e-07 | 18 |
mature T cell | 2.93e-07 | 18 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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cancer | 3.29e-19 | 235 |
disease of cellular proliferation | 4.48e-18 | 239 |
cell type cancer | 1.60e-17 | 143 |
carcinoma | 3.80e-16 | 106 |
germ cell and embryonal cancer | 6.99e-10 | 22 |
germ cell cancer | 6.99e-10 | 22 |
organ system cancer | 9.52e-09 | 137 |
Showing 1 to 7 of 7 entries