FFCP PHASE2:Hg19::chr6:160101463..160101476,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6648 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:11180...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=11180 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 14:07, 16 September 2015
Short description: | p24@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SOD2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -60bp_to_uc003qsf.3_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p24@SOD2 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.66e-45 | 48 |
phagocyte | 8.66e-45 | 48 |
classical monocyte | 2.10e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-41 | 42 |
myeloid leukocyte | 7.11e-36 | 72 |
monopoietic cell | 3.82e-34 | 59 |
monocyte | 3.82e-34 | 59 |
monoblast | 3.82e-34 | 59 |
promonocyte | 3.82e-34 | 59 |
macrophage dendritic cell progenitor | 8.98e-33 | 61 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.04e-26 | 76 |
immune system | 1.94e-25 | 93 |
bone element | 3.61e-24 | 82 |
hemolymphoid system | 1.17e-23 | 108 |
skeletal system | 4.79e-23 | 100 |
hematopoietic system | 6.97e-22 | 98 |
blood island | 6.97e-22 | 98 |
skeletal element | 2.61e-21 | 90 |
musculoskeletal system | 3.57e-16 | 167 |
lateral plate mesoderm | 9.25e-11 | 203 |
Showing 1 to 10 of 11 entries