FFCP PHASE1:Mm9::chr2:84309658..84309661,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:84309658..84309661,-
|short_description=p@chr2:84309658..84309661,-
|description=CAGE_peak_at_chr2:84309658..84309661,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:84309658..84309661,- | |||
|description=CAGE_peak_at_chr2:84309658..84309661,- | |||
|id=chr2:84309658..84309661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.21e-09,3;CL:0000351,1.21e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!9.00e-12!33;UBERON:0004535!3.51e-08!23;UBERON:0001009!3.51e-08!23;UBERON:0000926!1.27e-07!193;UBERON:0004120!1.27e-07!193;UBERON:0006603!1.27e-07!193;UBERON:0007100!5.28e-07!18;UBERON:0000948!5.28e-07!18;UBERON:0005498!5.28e-07!18;UBERON:0004140!5.28e-07!18;UBERON:0009881!5.28e-07!18;UBERON:0004141!5.28e-07!18;UBERON:0003084!5.28e-07!18;UBERON:0007005!5.28e-07!18;UBERON:0004139!5.28e-07!18;UBERON:0004291!5.28e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.57e-20,3;UBERON:0000478,2.57e-20,3;UBERON:0000158,2.57e-20,3;UBERON:0004872,1.36e-14,33;UBERON:0001987,3.90e-14,2;UBERON:0003124,3.90e-14,2;UBERON:0004340,3.90e-14,2;UBERON:0000358,1.21e-09,3;UBERON:0000307,1.21e-09,3;UBERON:0007010,1.21e-09,3;UBERON:0004535,1.48e-09,23;UBERON:0001009,1.48e-09,23;UBERON:0007100,1.01e-08,18;UBERON:0000948,1.01e-08,18;UBERON:0005498,1.01e-08,18;UBERON:0004140,1.01e-08,18;UBERON:0009881,1.01e-08,18;UBERON:0004141,1.01e-08,18;UBERON:0003084,1.01e-08,18;UBERON:0007005,1.01e-08,18;UBERON:0004139,1.01e-08,18;UBERON:0004291,1.01e-08,18;UBERON:0000305,7.32e-08,1;UBERON:0005795,1.66e-07,4;UBERON:0000995,1.66e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.157731082679119,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,1.73036477414062,0,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0,0,0.796137067273973,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,1.77087808572663,1.54267112887378,0.697601834251224,1.3413670069981,0.350296027101508,0.16455984991348,0.492502392237286,0.810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.605050573870028,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,1.11642284300551,0,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.938760993154008,0,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0,6.8054795338476,1.48282449604674,0,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,0,0.170870880797853,1.03193433981611,0.740778109478847,0.941842285023455,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0.66183396182839,0.777804753376191,0.258319646955462,0.506868376472335,0.469428954583016,0.13020438484395,0,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.738447635872886,0.100966449948148,0.381034033274999,0.403304740547362,0.292373642219257,0.288635524920988,0.233753804363138,0,2.21985953374065,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.157731082679119,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,1.73036477414062,0,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0,0,0.796137067273973,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,1.77087808572663,1.54267112887378,0.697601834251224,1.3413670069981,0.350296027101508,0.16455984991348,0.492502392237286,0.810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.605050573870028,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,1.11642284300551,0,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.938760993154008,0,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0,6.8054795338476,1.48282449604674,0,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,0,0.170870880797853,1.03193433981611,0.740778109478847,0.941842285023455,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0.66183396182839,0.777804753376191,0.258319646955462,0.506868376472335,0.469428954583016,0.13020438484395,0,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.738447635872886,0.100966449948148,0.381034033274999,0.403304740547362,0.292373642219257,0.288635524920988,0.233753804363138,0,2.21985953374065,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr2:84309658..84309661,- | |||
}} | }} |
Latest revision as of 13:55, 5 August 2015
Short description: | p@chr2:84309658..84309661, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:84309658..84309661, - |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.21e-09 | 3 |
trophoblast cell | 1.21e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.57e-20 | 3 |
extraembryonic structure | 2.57e-20 | 3 |
membranous layer | 2.57e-20 | 3 |
splanchnic layer of lateral plate mesoderm | 1.36e-14 | 33 |
placenta | 3.90e-14 | 2 |
chorion | 3.90e-14 | 2 |
allantois | 3.90e-14 | 2 |
blastocyst | 1.21e-09 | 3 |
blastula | 1.21e-09 | 3 |
cleaving embryo | 1.21e-09 | 3 |
cardiovascular system | 1.48e-09 | 23 |
circulatory system | 1.48e-09 | 23 |
primary circulatory organ | 1.01e-08 | 18 |
heart | 1.01e-08 | 18 |
primitive heart tube | 1.01e-08 | 18 |
primary heart field | 1.01e-08 | 18 |
anterior lateral plate mesoderm | 1.01e-08 | 18 |
heart tube | 1.01e-08 | 18 |
heart primordium | 1.01e-08 | 18 |
cardiac mesoderm | 1.01e-08 | 18 |
cardiogenic plate | 1.01e-08 | 18 |
heart rudiment | 1.01e-08 | 18 |
amnion | 7.32e-08 | 1 |
embryonic uterus | 1.66e-07 | 4 |
uterus | 1.66e-07 | 4 |