FFCP PHASE1:Mm9::chr3:9801594..9801597,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:9801594..9801597,-
|short_description=p@chr3:9801594..9801597,-
|description=CAGE_peak_at_chr3:9801594..9801597,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:9801594..9801597,- | |||
|description=CAGE_peak_at_chr3:9801594..9801597,- | |||
|id=chr3:9801594..9801597,- | |||
|ontology_enrichment_celltype=CL:0000988!2.61e-07!32;CL:0002032!2.61e-07!32;CL:0000037!2.61e-07!32;CL:0000566!2.61e-07!32;CL:0000837!2.61e-07!32 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.53e-17,3;DOID:4045,3.53e-17,3;DOID:0050686,7.51e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-13!45;UBERON:0003061!2.56e-13!45;UBERON:0002193!1.33e-12!48;UBERON:0004177!4.41e-11!29;UBERON:0000065!3.34e-08!41;UBERON:0001004!8.56e-08!42;UBERON:0002370!1.20e-07!23;UBERON:0000974!1.20e-07!23;UBERON:0004807!1.20e-07!23;UBERON:0005058!1.20e-07!23;UBERON:0003351!1.20e-07!23;UBERON:0009113!1.20e-07!23;UBERON:0003295!1.20e-07!23;UBERON:0009722!1.20e-07!23;UBERON:0005562!1.20e-07!23;UBERON:0007690!1.20e-07!23;UBERON:0006562!4.41e-07!24;UBERON:0003408!4.41e-07!24;UBERON:0001557!4.41e-07!24;UBERON:0001042!4.41e-07!24;UBERON:0008814!4.41e-07!24;UBERON:0009145!4.41e-07!24;UBERON:0002405!6.70e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.08e-10,29;UBERON:0005057,2.08e-10,29;UBERON:0000077,1.82e-08,35;UBERON:0002390,4.46e-08,45;UBERON:0003061,4.46e-08,45;UBERON:0002370,1.23e-07,23;UBERON:0000974,1.23e-07,23;UBERON:0004807,1.23e-07,23;UBERON:0005058,1.23e-07,23;UBERON:0003351,1.23e-07,23;UBERON:0009113,1.23e-07,23;UBERON:0003295,1.23e-07,23;UBERON:0009722,1.23e-07,23;UBERON:0005562,1.23e-07,23;UBERON:0007690,1.23e-07,23;UBERON:0002193,1.68e-07,48;UBERON:0002405,1.68e-07,48;UBERON:0006562,2.67e-07,24;UBERON:0003408,2.67e-07,24;UBERON:0001557,2.67e-07,24;UBERON:0001042,2.67e-07,24;UBERON:0008814,2.67e-07,24;UBERON:0009145,2.67e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0.468129052643987,0,0.0797721589953364,0,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,7.813353445238,2.61761871986899,26.4704169613956,7.5135003345429,3.39857247121808,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.452114453507145,0,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,1.11618338060241,0.655453258862952,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0.596861720015682,0.328281799490123,0.291480836629851,0,0.512612642393558,0.206386867963223,1.48155621895769,0.376736914009382,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.506868376472335,0,0,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.616265742988964,0.51968329191118,0.895133478337407,0.39736270956253,1.08175904567972,1.9199638532695,1.00966449948148,0.381034033274999,0.907435666231565,1.46186821109629,1.34696578296461,1.8700304349051,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0.468129052643987,0,0.0797721589953364,0,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,7.813353445238,2.61761871986899,26.4704169613956,7.5135003345429,3.39857247121808,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.452114453507145,0,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,1.11618338060241,0.655453258862952,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0.596861720015682,0.328281799490123,0.291480836629851,0,0.512612642393558,0.206386867963223,1.48155621895769,0.376736914009382,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.506868376472335,0,0,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.616265742988964,0.51968329191118,0.895133478337407,0.39736270956253,1.08175904567972,1.9199638532695,1.00966449948148,0.381034033274999,0.907435666231565,1.46186821109629,1.34696578296461,1.8700304349051,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:9801594..9801597,- | |||
}} | }} |
Latest revision as of 10:07, 4 August 2015
Short description: | p@chr3:9801594..9801597, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:9801594..9801597, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.08e-10 | 29 |
immune organ | 2.08e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.82e-08 | 35 |
hematopoietic system | 4.46e-08 | 45 |
blood island | 4.46e-08 | 45 |
thymus | 1.23e-07 | 23 |
neck | 1.23e-07 | 23 |
respiratory system epithelium | 1.23e-07 | 23 |
hemolymphoid system gland | 1.23e-07 | 23 |
pharyngeal epithelium | 1.23e-07 | 23 |
thymic region | 1.23e-07 | 23 |
pharyngeal gland | 1.23e-07 | 23 |
entire pharyngeal arch endoderm | 1.23e-07 | 23 |
thymus primordium | 1.23e-07 | 23 |
early pharyngeal endoderm | 1.23e-07 | 23 |
hemolymphoid system | 1.68e-07 | 48 |
immune system | 1.68e-07 | 48 |
pharynx | 2.67e-07 | 24 |
gland of gut | 2.67e-07 | 24 |
upper respiratory tract | 2.67e-07 | 24 |
chordate pharynx | 2.67e-07 | 24 |
pharyngeal arch system | 2.67e-07 | 24 |
pharyngeal region of foregut | 2.67e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.53e-17 | 3 |
muscle cancer | 3.53e-17 | 3 |
organ system cancer | 7.51e-09 | 6 |