FFCP PHASE1:Mm9::chr4:115840168..115840184,-: Difference between revisions
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|id=chr4:115840168..115840184,-
|short_description=p2@Tspan1
|description=CAGE_peak_2_at_Tspan1_5end
|association_with_transcript=18bp_to_NM_133681,uc008ugk.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66805 | |EntrezGene=66805 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1751 | |||
|TSSclassifier=NA | |||
|UniProt=Q99J59 | |UniProt=Q99J59 | ||
|association_with_transcript=18bp_to_NM_133681,uc008ugk.1_5end | |||
|cluster_id=chr4:115840168..115840184,- | |||
|description=CAGE_peak_2_at_Tspan1_5end | |||
|id=chr4:115840168..115840184,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.99e-22!59;UBERON:0000160!1.62e-20!43;UBERON:0004119!9.05e-18!130;UBERON:0000925!9.05e-18!130;UBERON:0006595!9.05e-18!130;UBERON:0001007!1.05e-17!128;UBERON:0001555!1.05e-17!128;UBERON:0007026!1.05e-17!128;UBERON:0004921!1.81e-16!126;UBERON:0004185!1.81e-16!126;UBERON:0000344!1.29e-09!15;UBERON:0001242!3.12e-08!13;UBERON:0000060!3.12e-08!13;UBERON:0001262!3.12e-08!13;UBERON:0004786!3.12e-08!13;UBERON:0005178!4.01e-08!17;UBERON:0005181!4.01e-08!17;UBERON:0002224!4.01e-08!17;UBERON:0000915!4.01e-08!17;UBERON:0008947!4.01e-08!17;UBERON:0003258!4.01e-08!17;UBERON:0000464!7.22e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.19e-20,47;UBERON:0000160,2.59e-19,31;UBERON:0004119,8.02e-12,118;UBERON:0000925,8.02e-12,118;UBERON:0006595,8.02e-12,118;UBERON:0001007,1.16e-11,116;UBERON:0001555,1.16e-11,116;UBERON:0007026,1.16e-11,116;UBERON:0000344,2.84e-11,15;UBERON:0004921,1.52e-10,114;UBERON:0001242,1.31e-09,13;UBERON:0001262,1.31e-09,13;UBERON:0004786,1.31e-09,13;UBERON:0005178,2.15e-07,17;UBERON:0005181,2.15e-07,17;UBERON:0002224,2.15e-07,17;UBERON:0000915,2.15e-07,17;UBERON:0008947,2.15e-07,17;UBERON:0003258,2.15e-07,17 | |||
|phase1_expression=0,3.83872948403297,8.18998630901165,3.0246421130683,4.50806156951712,23.6709773395765,32.4721570427781,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,32.1584769814747,36.2466664086129,7.46501553349526,30.1533397311352,22.6244794320183,144.037751947931,77.6252799660587,143.903101415293,0,0,0,17.908800424579,25.7663700305663,16.7418872135143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00533194750986,0,0,0,0.14084341977668,0,0,0,79.885194133138,72.7142813913533,71.7844711920992,15.300639882354,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,333.641252580439,0,0,35.5085306739942,0,0,0,0,0,0,0,0,0,0,0.203678727700633,4.97627882440372,16.4269792981889,5.26104639716185,0,0,0,0,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0,8.92130714056255,19.5693419331023,0.426576501070468,0.928946687441754,3.60828891701861,7.26060688644033,9.11749979763968,19.403013863481,25.1500402618591,24.7048432086016,31.4169011000337,31.2361661104607,35.2884997685607,17.9763881730844,107.204472737848,114.506232121261,0,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.33258057791605,6.82954600941979,13.2849133181642,14.6008816892479,19.8669433914099,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,23.0941487708256,0.189491411770485,0.814824882210129,0.339490171550376,3.28566347603903,7.37027532743989,18.5674039891091,16.7814937157707,8.51229778173431,9.30151696524855,6.37819074629948,14.9115616391322,11.0518388394173,19.8169210256671,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.890328018336276,0.651547837414304,7.75359577970917,3.98235415019888,0.485561272309963,1.209294227859,5.46954731292105,7.38254732201932,5.84126781093462,10.8539883130653,7.27067458955011,11.0514187299264,4.74055136903724,0,5.15677716240934,1.70219802876894,0,0,0.643011105094777,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,8.89694697628045,282.937934704516,0.16488625294148,0,0.120625849856312,0.835606408021955,1.96969079694074,20.9866202373493,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,90.6937087114358,0,2.84647253977588,8.4244165841005,18.6088583452877,23.1464317570948,24.0058536564981,29.2593233267689,80.8825860730652,346.460823608962,30.4456263412594,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0,0.716106782669926,0.596044064343795,0.360586348559907,0.295379054349154,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,10.6563280299149,0,0.269141569828427,0,4.44336066274038,3.94133198447482,51.831909667636,17.1494703263253,368.655496465992,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.551530525350042,3.33370091702423,2.26638562962784,1.60459604795908,3.03236654116557,1.52087579934144,2.45214243801899,1.31098110457835,1.6646539625266,1.09127391015665,1.42888107384922,0.927074607558844,0.964546102318525,1.64834360321323,0.883193520806384,1.02860775715625,4.43689515398344,1.43061713968393,2.61623549938191,1.2234219453993,2.45382362885862,2.37806364734604,2.10455769150274,1.49384525230448,1.12228454331548,1.89816028998679,0.886540341380071,1.22769312950907,2.47898945897546,1.92906610981141,2.24829520144151,3.27504251823572,4.29742108096597,1.72159498861959,1.10295709559758,1.62307484934295 | |phase1_expression=0,3.83872948403297,8.18998630901165,3.0246421130683,4.50806156951712,23.6709773395765,32.4721570427781,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,32.1584769814747,36.2466664086129,7.46501553349526,30.1533397311352,22.6244794320183,144.037751947931,77.6252799660587,143.903101415293,0,0,0,17.908800424579,25.7663700305663,16.7418872135143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00533194750986,0,0,0,0.14084341977668,0,0,0,79.885194133138,72.7142813913533,71.7844711920992,15.300639882354,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,333.641252580439,0,0,35.5085306739942,0,0,0,0,0,0,0,0,0,0,0.203678727700633,4.97627882440372,16.4269792981889,5.26104639716185,0,0,0,0,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0,8.92130714056255,19.5693419331023,0.426576501070468,0.928946687441754,3.60828891701861,7.26060688644033,9.11749979763968,19.403013863481,25.1500402618591,24.7048432086016,31.4169011000337,31.2361661104607,35.2884997685607,17.9763881730844,107.204472737848,114.506232121261,0,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.33258057791605,6.82954600941979,13.2849133181642,14.6008816892479,19.8669433914099,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,23.0941487708256,0.189491411770485,0.814824882210129,0.339490171550376,3.28566347603903,7.37027532743989,18.5674039891091,16.7814937157707,8.51229778173431,9.30151696524855,6.37819074629948,14.9115616391322,11.0518388394173,19.8169210256671,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.890328018336276,0.651547837414304,7.75359577970917,3.98235415019888,0.485561272309963,1.209294227859,5.46954731292105,7.38254732201932,5.84126781093462,10.8539883130653,7.27067458955011,11.0514187299264,4.74055136903724,0,5.15677716240934,1.70219802876894,0,0,0.643011105094777,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,8.89694697628045,282.937934704516,0.16488625294148,0,0.120625849856312,0.835606408021955,1.96969079694074,20.9866202373493,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,90.6937087114358,0,2.84647253977588,8.4244165841005,18.6088583452877,23.1464317570948,24.0058536564981,29.2593233267689,80.8825860730652,346.460823608962,30.4456263412594,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0,0.716106782669926,0.596044064343795,0.360586348559907,0.295379054349154,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,10.6563280299149,0,0.269141569828427,0,4.44336066274038,3.94133198447482,51.831909667636,17.1494703263253,368.655496465992,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.551530525350042,3.33370091702423,2.26638562962784,1.60459604795908,3.03236654116557,1.52087579934144,2.45214243801899,1.31098110457835,1.6646539625266,1.09127391015665,1.42888107384922,0.927074607558844,0.964546102318525,1.64834360321323,0.883193520806384,1.02860775715625,4.43689515398344,1.43061713968393,2.61623549938191,1.2234219453993,2.45382362885862,2.37806364734604,2.10455769150274,1.49384525230448,1.12228454331548,1.89816028998679,0.886540341380071,1.22769312950907,2.47898945897546,1.92906610981141,2.24829520144151,3.27504251823572,4.29742108096597,1.72159498861959,1.10295709559758,1.62307484934295 | ||
|short_description=p2@Tspan1 | |||
}} | }} |
Latest revision as of 04:53, 26 September 2015
Short description: | p2@Tspan1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tspan1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1751 |
Association with transcript: | 18bp_to_NM_133681, uc008ugk.1_5end |
EntrezGene: | Tspan1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.19e-20 | 47 |
intestine | 2.59e-19 | 31 |
endoderm-derived structure | 8.02e-12 | 118 |
endoderm | 8.02e-12 | 118 |
presumptive endoderm | 8.02e-12 | 118 |
digestive system | 1.16e-11 | 116 |
digestive tract | 1.16e-11 | 116 |
primitive gut | 1.16e-11 | 116 |
mucosa | 2.84e-11 | 15 |
subdivision of digestive tract | 1.52e-10 | 114 |
intestinal mucosa | 1.31e-09 | 13 |
wall of intestine | 1.31e-09 | 13 |
gastrointestinal system mucosa | 1.31e-09 | 13 |
thoracic cavity element | 2.15e-07 | 17 |
thoracic segment organ | 2.15e-07 | 17 |
thoracic cavity | 2.15e-07 | 17 |
thoracic segment of trunk | 2.15e-07 | 17 |
respiratory primordium | 2.15e-07 | 17 |
endoderm of foregut | 2.15e-07 | 17 |