FFCP PHASE1:Mm9::chr4:115840196..115840212,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:115840196..115840212,-
|short_description=p1@Tspan1
|description=CAGE_peak_1_at_Tspan1_5end
|association_with_transcript=0bp_to_ENSMUST00000030465,ENSMUST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66805 | |EntrezGene=66805 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1751 | |||
|TSSclassifier=NA | |||
|UniProt=Q99J59 | |UniProt=Q99J59 | ||
|association_with_transcript=0bp_to_ENSMUST00000030465,ENSMUST00000143426,NM_133681,uc008ugk.1_5end | |||
|cluster_id=chr4:115840196..115840212,- | |||
|description=CAGE_peak_1_at_Tspan1_5end | |||
|id=chr4:115840196..115840212,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.63e-21!59;UBERON:0000160!1.19e-19!43;UBERON:0004119!8.53e-19!130;UBERON:0000925!8.53e-19!130;UBERON:0006595!8.53e-19!130;UBERON:0001007!2.99e-18!128;UBERON:0001555!2.99e-18!128;UBERON:0007026!2.99e-18!128;UBERON:0004921!4.22e-17!126;UBERON:0004185!4.22e-17!126;UBERON:0000344!1.97e-08!15;UBERON:0005178!2.30e-07!17;UBERON:0005181!2.30e-07!17;UBERON:0002224!2.30e-07!17;UBERON:0000915!2.30e-07!17;UBERON:0008947!2.30e-07!17;UBERON:0003258!2.30e-07!17;UBERON:0002108!2.36e-07!16;UBERON:0001242!2.99e-07!13;UBERON:0000060!2.99e-07!13;UBERON:0001262!2.99e-07!13;UBERON:0004786!2.99e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.28e-19,47;UBERON:0000160,1.94e-17,31;UBERON:0004119,3.45e-14,118;UBERON:0000925,3.45e-14,118;UBERON:0006595,3.45e-14,118;UBERON:0001007,1.11e-13,116;UBERON:0001555,1.11e-13,116;UBERON:0007026,1.11e-13,116;UBERON:0004921,1.29e-12,114;UBERON:0000344,3.07e-09,15;UBERON:0001242,6.40e-08,13;UBERON:0001262,6.40e-08,13;UBERON:0004786,6.40e-08,13;UBERON:0005178,1.78e-07,17;UBERON:0005181,1.78e-07,17;UBERON:0002224,1.78e-07,17;UBERON:0000915,1.78e-07,17;UBERON:0008947,1.78e-07,17;UBERON:0003258,1.78e-07,17 | |||
|phase1_expression=0.160148847104794,13.9590163055744,20.9299650119187,6.95667686005709,16.0286633582831,80.0784127019714,99.7525975342895,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,38.94982688919,0,0,79.6762265511165,94.5166237996741,23.5435105287158,77.1063973124744,66.1496684345679,400.189321375123,172.136578626033,373.837640964844,0,0,0,20.7973166220918,36.7378566242268,20.4169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,37.7795490154412,0,0,0,0.563373679106722,0,0,0,379.508794892658,337.475340812831,319.996973694358,57.4344914986872,0,0,0,0,0,0,0,0,3.70792451601561,0.144599356919912,0,0.647067399789637,0,0,1929.15472860756,0,0,85.0671993844609,0,0,0,0,0,0,0,0.255715457330331,0,0,0.81471491080253,16.6705340617525,60.6534620240819,11.5743020737561,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,4.65666067330228,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.925602677324269,0,1.87791380979733,0.583826711835847,0,0,0.162137619091711,0,0,0,0.210289948564127,0,20.8163833279793,41.2542883995129,1.2797295032114,3.0190767341857,9.53619213783491,16.9414160683608,20.6811580775729,52.6924984331789,62.163307062331,68.0206683010165,109.330815828117,84.9544135615714,121.657590362331,48.536248067328,408.500914263172,410.231022903996,0.379335801906163,0.685491075658373,1.1270773567308,2.24016460629846,4.26695471768777,4.27828501330943,28.8358609286613,45.7591458736767,55.7345483836881,79.7145678934831,1.77871576252289,0,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0,0,77.9658462503072,0.568474235311454,3.09633455239849,3.05541154395339,7.27539769694356,20.4357634079015,36.6587206964461,29.4651808265276,17.8127712839996,17.2742457926044,17.2211150150086,36.2137925521781,40.2356007747537,51.9290120307627,0,0,4.42587845717133,1.65562047782839,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,17.3166903954088,1.6025904330053,2.93196526836437,39.757799636381,3.98235415019888,1.94224508923985,4.53485335447127,40.3614870677622,40.7516612175466,35.3550420135517,53.75308497899,44.7146487257332,60.6045543254026,9.16506598013866,6.32511651449993,12.3762651897824,4.76615448055303,0.900305470156551,2.45781499187234,1.28602221018955,0.709360934569094,2.85390108163313,2.13913726782757,3.65357938937519,1.64270195644597,28.1736654248881,862.266036394901,0.49465875882444,0.161464426695906,0.301564624640779,1.07435109602823,5.41664969158702,47.2198955340358,0,0,2.06386867963222,0.740778109478847,0,0,0,0,0,0,369.457529171849,1.42351197111511,18.0954325742895,39.5299547407793,57.2901931079644,115.95052134922,162.511537393709,159.355862638448,287.408024298465,1549.15816078351,32.9309835936071,0,0,0,0.194451188344048,0.129159823477731,0,0,0.5208175393758,0,0,0,1.26404448251271,0.202725215290164,0.924398614483445,0.389762468933385,1.43221356533985,1.98681354781265,1.44234539423963,1.77227432609493,2.1202954489111,1.143102099825,1.71404514732629,2.33898913775406,1.44317762460494,1.8700304349051,12.6969014824518,0.887943813496259,0.62799699626633,0,19.7053385912834,7.13193406714492,300.185512174047,114.901451186379,1210.79505914137,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.43106717068294,0,1.83843508450014,7.11189528965169,3.91466608753899,6.09746498224449,5.81203587056734,5.32306529769503,5.47016390019621,4.58843386602424,5.6342134116285,5.91585330242817,5.71552429539688,5.33067899346335,7.13764115715709,6.1812885120496,6.03515572551029,6.51451579532289,6.38912902173615,9.0605752179982,5.52316383202848,6.58765662907314,5.66917872874233,4.57319932181931,6.05060336307039,6.51859746460137,9.53941861818155,5.57584585183618,5.61475549540712,4.91077251803627,5.73266312388074,5.01557188550968,6.74488560432454,11.2287172053796,10.7435527024149,7.46024495068489,5.95596831622692,3.47801753430632 | |phase1_expression=0.160148847104794,13.9590163055744,20.9299650119187,6.95667686005709,16.0286633582831,80.0784127019714,99.7525975342895,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,38.94982688919,0,0,79.6762265511165,94.5166237996741,23.5435105287158,77.1063973124744,66.1496684345679,400.189321375123,172.136578626033,373.837640964844,0,0,0,20.7973166220918,36.7378566242268,20.4169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,37.7795490154412,0,0,0,0.563373679106722,0,0,0,379.508794892658,337.475340812831,319.996973694358,57.4344914986872,0,0,0,0,0,0,0,0,3.70792451601561,0.144599356919912,0,0.647067399789637,0,0,1929.15472860756,0,0,85.0671993844609,0,0,0,0,0,0,0,0.255715457330331,0,0,0.81471491080253,16.6705340617525,60.6534620240819,11.5743020737561,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,4.65666067330228,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.925602677324269,0,1.87791380979733,0.583826711835847,0,0,0.162137619091711,0,0,0,0.210289948564127,0,20.8163833279793,41.2542883995129,1.2797295032114,3.0190767341857,9.53619213783491,16.9414160683608,20.6811580775729,52.6924984331789,62.163307062331,68.0206683010165,109.330815828117,84.9544135615714,121.657590362331,48.536248067328,408.500914263172,410.231022903996,0.379335801906163,0.685491075658373,1.1270773567308,2.24016460629846,4.26695471768777,4.27828501330943,28.8358609286613,45.7591458736767,55.7345483836881,79.7145678934831,1.77871576252289,0,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0,0,77.9658462503072,0.568474235311454,3.09633455239849,3.05541154395339,7.27539769694356,20.4357634079015,36.6587206964461,29.4651808265276,17.8127712839996,17.2742457926044,17.2211150150086,36.2137925521781,40.2356007747537,51.9290120307627,0,0,4.42587845717133,1.65562047782839,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,17.3166903954088,1.6025904330053,2.93196526836437,39.757799636381,3.98235415019888,1.94224508923985,4.53485335447127,40.3614870677622,40.7516612175466,35.3550420135517,53.75308497899,44.7146487257332,60.6045543254026,9.16506598013866,6.32511651449993,12.3762651897824,4.76615448055303,0.900305470156551,2.45781499187234,1.28602221018955,0.709360934569094,2.85390108163313,2.13913726782757,3.65357938937519,1.64270195644597,28.1736654248881,862.266036394901,0.49465875882444,0.161464426695906,0.301564624640779,1.07435109602823,5.41664969158702,47.2198955340358,0,0,2.06386867963222,0.740778109478847,0,0,0,0,0,0,369.457529171849,1.42351197111511,18.0954325742895,39.5299547407793,57.2901931079644,115.95052134922,162.511537393709,159.355862638448,287.408024298465,1549.15816078351,32.9309835936071,0,0,0,0.194451188344048,0.129159823477731,0,0,0.5208175393758,0,0,0,1.26404448251271,0.202725215290164,0.924398614483445,0.389762468933385,1.43221356533985,1.98681354781265,1.44234539423963,1.77227432609493,2.1202954489111,1.143102099825,1.71404514732629,2.33898913775406,1.44317762460494,1.8700304349051,12.6969014824518,0.887943813496259,0.62799699626633,0,19.7053385912834,7.13193406714492,300.185512174047,114.901451186379,1210.79505914137,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.43106717068294,0,1.83843508450014,7.11189528965169,3.91466608753899,6.09746498224449,5.81203587056734,5.32306529769503,5.47016390019621,4.58843386602424,5.6342134116285,5.91585330242817,5.71552429539688,5.33067899346335,7.13764115715709,6.1812885120496,6.03515572551029,6.51451579532289,6.38912902173615,9.0605752179982,5.52316383202848,6.58765662907314,5.66917872874233,4.57319932181931,6.05060336307039,6.51859746460137,9.53941861818155,5.57584585183618,5.61475549540712,4.91077251803627,5.73266312388074,5.01557188550968,6.74488560432454,11.2287172053796,10.7435527024149,7.46024495068489,5.95596831622692,3.47801753430632 | ||
|short_description=p1@Tspan1 | |||
}} | }} |
Latest revision as of 04:54, 26 September 2015
Short description: | p1@Tspan1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1751 |
Association with transcript: | 0bp_to_ENSMUST00000030465, ENSMUST00000143426, NM_133681, uc008ugk.1_5end |
EntrezGene: | Tspan1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.28e-19 | 47 |
intestine | 1.94e-17 | 31 |
endoderm-derived structure | 3.45e-14 | 118 |
endoderm | 3.45e-14 | 118 |
presumptive endoderm | 3.45e-14 | 118 |
digestive system | 1.11e-13 | 116 |
digestive tract | 1.11e-13 | 116 |
primitive gut | 1.11e-13 | 116 |
subdivision of digestive tract | 1.29e-12 | 114 |
mucosa | 3.07e-09 | 15 |
intestinal mucosa | 6.40e-08 | 13 |
wall of intestine | 6.40e-08 | 13 |
gastrointestinal system mucosa | 6.40e-08 | 13 |
thoracic cavity element | 1.78e-07 | 17 |
thoracic segment organ | 1.78e-07 | 17 |
thoracic cavity | 1.78e-07 | 17 |
thoracic segment of trunk | 1.78e-07 | 17 |
respiratory primordium | 1.78e-07 | 17 |
endoderm of foregut | 1.78e-07 | 17 |