FFCP PHASE1:Mm9::chr4:118928099..118928109,+: Difference between revisions
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|id=chr4:118928099..118928109,+
|short_description=p4@Cldn19
|description=CAGE_peak_4_at_Cldn19_5end
|association_with_transcript=-4bp_to_ENSMUST00000094823_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242653 | |EntrezGene=242653 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1799 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ET38 | |UniProt=Q9ET38 | ||
|association_with_transcript=-4bp_to_ENSMUST00000094823_5end | |||
|cluster_id=chr4:118928099..118928109,+ | |||
|description=CAGE_peak_4_at_Cldn19_5end | |||
|id=chr4:118928099..118928109,+ | |||
|ontology_enrichment_celltype=CL:0000333!2.47e-07!10;CL:0000095!2.47e-07!10;CL:0000243!2.47e-07!10;CL:0000123!2.47e-07!10;CL:0000125!2.47e-07!10;CL:0000030!2.47e-07!10;CL:0000339!2.47e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.84e-13,2;CL:0002604,4.84e-13,2;CL:0000333,1.28e-09,10;CL:0000095,1.28e-09,10;CL:0000243,1.28e-09,10;CL:0000123,1.28e-09,10;CL:0000125,1.28e-09,10;CL:0000030,1.28e-09,10;CL:0000339,1.28e-09,10;CL:0000128,1.58e-09,6;CL:0000126,1.58e-09,6;CL:0000127,1.58e-09,6;CL:0002612,1.45e-08,3;CL:0000221,8.27e-08,44;CL:0000133,8.27e-08,44;CL:0000710,1.38e-07,1;CL:0002077,1.38e-07,1;CL:0005014,1.38e-07,1;CL:0002315,1.38e-07,1;CL:0002490,1.38e-07,1;CL:0002453,2.86e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!7.91e-17!21;UBERON:0006554!2.84e-10!16;UBERON:0002113!4.08e-10!14;UBERON:0003918!4.08e-10!14;UBERON:0005095!4.08e-10!14;UBERON:0007687!4.08e-10!14;UBERON:0001008!1.66e-09!17;UBERON:0004121!6.24e-08!102;UBERON:0000924!6.24e-08!102;UBERON:0006601!6.24e-08!102;UBERON:0003103!7.66e-08!43;UBERON:0002240!3.54e-07!6;UBERON:0005174!3.54e-07!6;UBERON:0001137!3.54e-07!6;UBERON:0000020!5.39e-07!12;UBERON:0001032!5.39e-07!12;UBERON:0004456!5.39e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.19e-22,21;UBERON:0002113,6.61e-15,14;UBERON:0003918,6.61e-15,14;UBERON:0011143,6.61e-15,14;UBERON:0005095,6.61e-15,14;UBERON:0007687,6.61e-15,14;UBERON:0006554,1.60e-11,18;UBERON:0001948,2.95e-11,5;UBERON:0002315,2.95e-11,5;UBERON:0001008,6.72e-11,19;UBERON:0003103,3.78e-10,43;UBERON:0002240,1.80e-09,6;UBERON:0005174,1.80e-09,6;UBERON:0001137,1.80e-09,6;UBERON:0002257,1.45e-08,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97717564461025,2.72201858703997,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,5.30084498283872,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,1.17851434189467,1.42371680799103,0,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,3.23939865486365,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.969762435838129,1.1221731182451,2.02356918797623,3.09981310757165,1.8839847340965,2.96153193412321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.477489376012546,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.956441660344217,0.661774257358546,1.85494268496337 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97717564461025,2.72201858703997,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,5.30084498283872,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,1.17851434189467,1.42371680799103,0,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,3.23939865486365,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.969762435838129,1.1221731182451,2.02356918797623,3.09981310757165,1.8839847340965,2.96153193412321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.477489376012546,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.956441660344217,0.661774257358546,1.85494268496337 | ||
|short_description=p4@Cldn19 | |||
}} | }} |
Latest revision as of 06:22, 26 September 2015
Short description: | p4@Cldn19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cldn19_5end |
Coexpression cluster: | MCL_coexpression_mm9:1799 |
Association with transcript: | -4bp_to_ENSMUST00000094823_5end |
EntrezGene: | Cldn19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.84e-13 | 2 |
astrocyte of the hippocampus | 4.84e-13 | 2 |
migratory neural crest cell | 1.28e-09 | 10 |
neuron associated cell | 1.28e-09 | 10 |
glial cell (sensu Vertebrata) | 1.28e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.28e-09 | 10 |
glial cell | 1.28e-09 | 10 |
glioblast | 1.28e-09 | 10 |
glioblast (sensu Vertebrata) | 1.28e-09 | 10 |
oligodendrocyte | 1.58e-09 | 6 |
macroglial cell | 1.58e-09 | 6 |
astrocyte | 1.58e-09 | 6 |
neuron of the ventral spinal cord | 1.45e-08 | 3 |
ectodermal cell | 8.27e-08 | 44 |
neurectodermal cell | 8.27e-08 | 44 |
neurecto-epithelial cell | 1.38e-07 | 1 |
ecto-epithelial cell | 1.38e-07 | 1 |
auditory epithelial support cell | 1.38e-07 | 1 |
supporting cell of cochlea | 1.38e-07 | 1 |
organ of Corti supporting cell | 1.38e-07 | 1 |
oligodendrocyte precursor cell | 2.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.19e-22 | 21 |
kidney | 6.61e-15 | 14 |
kidney mesenchyme | 6.61e-15 | 14 |
upper urinary tract | 6.61e-15 | 14 |
kidney rudiment | 6.61e-15 | 14 |
kidney field | 6.61e-15 | 14 |
urinary system structure | 1.60e-11 | 18 |
regional part of spinal cord | 2.95e-11 | 5 |
gray matter of spinal cord | 2.95e-11 | 5 |
renal system | 6.72e-11 | 19 |
compound organ | 3.78e-10 | 43 |
spinal cord | 1.80e-09 | 6 |
dorsal region element | 1.80e-09 | 6 |
dorsum | 1.80e-09 | 6 |
ventral horn of spinal cord | 1.45e-08 | 3 |