FFCP PHASE1:Mm9::chr5:142917060..142917064,+: Difference between revisions
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|id=chr5:142917060..142917064,+
|short_description=p@chr5:142917060..142917064,+
|description=CAGE_peak_at_chr5:142917060..142917064,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:142917060..142917064,+ | |||
|description=CAGE_peak_at_chr5:142917060..142917064,+ | |||
|id=chr5:142917060..142917064,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.01e-16!9;CL:0002251!7.01e-16!9;CL:0000223!1.98e-13!20;CL:0000066!1.39e-12!25;CL:0002250!3.40e-10!3;CL:0002076!4.33e-09!15;CL:0000239!4.22e-08!6;CL:0000677!4.22e-08!6;CL:0000212!4.22e-08!6;CL:0000584!4.22e-08!6;CL:0000075!6.16e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.17e-38,3;CL:0002563,6.67e-23,9;CL:0002251,6.67e-23,9;CL:0000223,1.20e-22,20;CL:0000066,3.44e-18,25;CL:0002076,5.65e-14,15;CL:0000057,8.69e-14,1;CL:0000632,8.69e-14,1;CL:0000213,1.55e-13,1;CL:0002078,1.55e-13,1;CL:0000115,1.55e-13,1;CL:0002262,1.55e-13,1;CL:1000398,1.55e-13,1;CL:0000182,9.88e-11,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!7.01e-16!9;UBERON:0004808!7.01e-16!9;UBERON:0001277!7.01e-16!9;UBERON:0000344!2.13e-14!15;UBERON:0001242!1.33e-13!13;UBERON:0000060!1.33e-13!13;UBERON:0001262!1.33e-13!13;UBERON:0004786!1.33e-13!13;UBERON:0000485!8.55e-13!11;UBERON:0003929!7.10e-09!55;UBERON:0005911!1.68e-08!69;UBERON:0004923!2.27e-08!24;UBERON:0001007!1.05e-07!128;UBERON:0001555!1.05e-07!128;UBERON:0007026!1.05e-07!128;UBERON:0004119!1.66e-07!130;UBERON:0000925!1.66e-07!130;UBERON:0006595!1.66e-07!130;UBERON:0000160!2.46e-07!43;UBERON:0004921!4.52e-07!126;UBERON:0004185!4.52e-07!126;UBERON:0000490!7.43e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.67e-23,9;UBERON:0004808,6.67e-23,9;UBERON:0001277,6.67e-23,9;UBERON:0000485,7.50e-19,11;UBERON:0001242,4.85e-16,13;UBERON:0001262,4.85e-16,13;UBERON:0004786,4.85e-16,13;UBERON:0000344,5.65e-14,15;UBERON:0002394,1.55e-13,1;UBERON:0001281,1.55e-13,1;UBERON:0000353,1.55e-13,1;UBERON:0003497,1.55e-13,1;UBERON:0003909,1.55e-13,1;UBERON:0003928,1.55e-13,1;UBERON:0003835,1.55e-13,1;UBERON:0003513,1.55e-13,1;UBERON:0001280,1.55e-13,1;UBERON:0004647,1.55e-13,1;UBERON:0002294,1.55e-13,1;UBERON:0001173,1.55e-13,1;UBERON:0004912,1.55e-13,1;UBERON:0005171,1.55e-13,1;UBERON:0003929,2.55e-11,55;UBERON:0000490,1.86e-09,66;UBERON:0005911,4.75e-09,69;UBERON:0004923,6.53e-09,24;UBERON:0000160,5.47e-07,31 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.51091344720701,0.934450562382103,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,4.33277429626912,2.82598897109437,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.51091344720701,0.934450562382103,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,4.33277429626912,2.82598897109437,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:142917060..142917064,+ | |||
}} | }} |
Latest revision as of 23:57, 3 August 2015
Short description: | p@chr5:142917060..142917064, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:142917060..142917064, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.17e-38 | 3 |
intestinal epithelial cell | 6.67e-23 | 9 |
epithelial cell of alimentary canal | 6.67e-23 | 9 |
endodermal cell | 1.20e-22 | 20 |
epithelial cell | 3.44e-18 | 25 |
endo-epithelial cell | 5.65e-14 | 15 |
fibroblast | 8.69e-14 | 1 |
hepatic stellate cell | 8.69e-14 | 1 |
lining cell | 1.55e-13 | 1 |
meso-epithelial cell | 1.55e-13 | 1 |
endothelial cell | 1.55e-13 | 1 |
endothelial cell of sinusoid | 1.55e-13 | 1 |
endothelial cell of hepatic sinusoid | 1.55e-13 | 1 |
hepatocyte | 9.88e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.67e-23 | 9 |
gastrointestinal system epithelium | 6.67e-23 | 9 |
intestinal epithelium | 6.67e-23 | 9 |
simple columnar epithelium | 7.50e-19 | 11 |
intestinal mucosa | 4.85e-16 | 13 |
wall of intestine | 4.85e-16 | 13 |
gastrointestinal system mucosa | 4.85e-16 | 13 |
mucosa | 5.65e-14 | 15 |
bile duct | 1.55e-13 | 1 |
hepatic sinusoid | 1.55e-13 | 1 |
parenchyma | 1.55e-13 | 1 |
abdomen blood vessel | 1.55e-13 | 1 |
sinusoid | 1.55e-13 | 1 |
digestive system duct | 1.55e-13 | 1 |
abdominal segment blood vessel | 1.55e-13 | 1 |
trunk blood vessel | 1.55e-13 | 1 |
liver parenchyma | 1.55e-13 | 1 |
liver lobule | 1.55e-13 | 1 |
biliary system | 1.55e-13 | 1 |
biliary tree | 1.55e-13 | 1 |
biliary bud | 1.55e-13 | 1 |
hepatic duct | 1.55e-13 | 1 |
gut epithelium | 2.55e-11 | 55 |
unilaminar epithelium | 1.86e-09 | 66 |
endo-epithelium | 4.75e-09 | 69 |
organ component layer | 6.53e-09 | 24 |
intestine | 5.47e-07 | 31 |