FFCP PHASE1:Mm9::chr7:27918263..27918287,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:27918263..27918287,+
|short_description=p@chr7:27918263..27918287,+
|description=CAGE_peak_at_chr7:27918263..27918287,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:27918263..27918287,+ | |||
|description=CAGE_peak_at_chr7:27918263..27918287,+ | |||
|id=chr7:27918263..27918287,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.89e-08!5;CL:0000417!1.89e-08!5;CL:0000668!1.89e-08!5;CL:0000412!1.89e-08!5;CL:0000182!1.89e-08!5;CL:0000068!5.52e-07!3;CL:0002202!5.52e-07!3;CL:0000069!5.52e-07!3;CL:0002632!5.52e-07!3;CL:0002368!5.52e-07!3;CL:0000307!5.52e-07!3;CL:0000377!5.52e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.55e-21,5;CL:0000223,4.25e-08,20;CL:0000057,8.50e-08,1;CL:0000632,8.50e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!3.35e-16!17;UBERON:0005181!3.35e-16!17;UBERON:0002224!3.35e-16!17;UBERON:0000915!3.35e-16!17;UBERON:0008947!3.35e-16!17;UBERON:0003258!3.35e-16!17;UBERON:0009569!2.47e-14!66;UBERON:0000077!1.08e-12!97;UBERON:0001041!1.20e-12!92;UBERON:0002048!2.46e-11!14;UBERON:0000117!2.46e-11!14;UBERON:0000171!2.46e-11!14;UBERON:0000170!2.46e-11!14;UBERON:0005597!2.46e-11!14;UBERON:0000118!2.46e-11!14;UBERON:0002365!2.94e-11!25;UBERON:0002330!2.94e-11!25;UBERON:0002107!4.80e-11!22;UBERON:0007499!4.80e-11!22;UBERON:0006925!4.80e-11!22;UBERON:0009497!4.80e-11!22;UBERON:0000015!4.80e-11!22;UBERON:0002423!4.80e-11!22;UBERON:0006235!4.80e-11!22;UBERON:0008835!4.80e-11!22;UBERON:0003894!4.80e-11!22;UBERON:0004161!4.80e-11!22;UBERON:0008836!4.80e-11!22;UBERON:0000466!5.32e-11!79;UBERON:0009854!1.88e-10!23;UBERON:0009856!1.88e-10!23;UBERON:0005177!8.51e-10!85;UBERON:0005153!5.09e-09!17;UBERON:0005911!1.19e-08!69;UBERON:0002100!1.47e-08!98;UBERON:0003104!1.99e-08!131;UBERON:0009142!1.99e-08!131;UBERON:0004921!3.52e-08!126;UBERON:0004185!3.52e-08!126;UBERON:0001007!6.03e-08!128;UBERON:0001555!6.03e-08!128;UBERON:0007026!6.03e-08!128;UBERON:0004119!1.02e-07!130;UBERON:0000925!1.02e-07!130;UBERON:0006595!1.02e-07!130;UBERON:0003126!5.52e-07!3;UBERON:0001005!5.52e-07!3;UBERON:0007196!5.52e-07!3;UBERON:0001558!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.27e-28,22;UBERON:0007499,6.27e-28,22;UBERON:0006925,6.27e-28,22;UBERON:0009497,6.27e-28,22;UBERON:0000015,6.27e-28,22;UBERON:0002423,6.27e-28,22;UBERON:0006235,6.27e-28,22;UBERON:0008835,6.27e-28,22;UBERON:0003894,6.27e-28,22;UBERON:0004161,6.27e-28,22;UBERON:0008836,6.27e-28,22;UBERON:0009854,1.13e-26,23;UBERON:0009856,1.13e-26,23;UBERON:0002365,1.83e-24,25;UBERON:0002330,1.83e-24,25;UBERON:0009569,1.95e-17,66;UBERON:0005177,2.43e-14,79;UBERON:0005911,3.16e-14,69;UBERON:0001041,3.81e-14,80;UBERON:0005256,3.95e-13,45;UBERON:0003914,1.59e-12,47;UBERON:0002100,2.05e-12,90;UBERON:0005172,5.73e-12,49;UBERON:0005173,5.73e-12,49;UBERON:0002417,5.73e-12,49;UBERON:0000916,5.73e-12,49;UBERON:0003929,1.54e-10,55;UBERON:0002368,1.45e-09,60;UBERON:0004921,1.73e-09,114;UBERON:0003104,2.18e-09,61;UBERON:0009142,2.18e-09,61;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0004119,4.08e-09,118;UBERON:0000925,4.08e-09,118;UBERON:0006595,4.08e-09,118;UBERON:0002530,9.73e-09,65;UBERON:0000490,1.38e-08,66;UBERON:0000025,4.96e-08,114;UBERON:0001048,7.70e-08,134;UBERON:0000949,8.99e-08,72;UBERON:0004111,2.11e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,8.15965600449301,15.6513925574967,26.6408331153544,11.6486990645307,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.68510327831436,0,0,0,0,0,0,0,0.502666365318702,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,1.01031551178845,2.33216637578486,3.85954817090694,3.8798169934987,0,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,1.96635977658886,1.72684981865896,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,8.15965600449301,15.6513925574967,26.6408331153544,11.6486990645307,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.68510327831436,0,0,0,0,0,0,0,0.502666365318702,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,1.01031551178845,2.33216637578486,3.85954817090694,3.8798169934987,0,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,1.96635977658886,1.72684981865896,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:27918263..27918287,+ | |||
}} | }} |
Latest revision as of 21:18, 4 August 2015
Short description: | p@chr7:27918263..27918287, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:27918263..27918287, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.55e-21 | 5 |
endodermal cell | 4.25e-08 | 20 |
fibroblast | 8.50e-08 | 1 |
hepatic stellate cell | 8.50e-08 | 1 |