FFCP PHASE1:Mm9::chr7:29710433..29710437,-: Difference between revisions
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|id=chr7:29710433..29710437,-
|short_description=p@chr7:29710433..29710437,-
|description=CAGE_peak_at_chr7:29710433..29710437,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1341 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:29710433..29710437,- | |||
|description=CAGE_peak_at_chr7:29710433..29710437,- | |||
|id=chr7:29710433..29710437,- | |||
|ontology_enrichment_celltype=CL:0000066!2.84e-19!25;CL:0002563!5.57e-19!9;CL:0002251!5.57e-19!9;CL:0000223!3.36e-16!20;CL:0000239!2.45e-13!6;CL:0000677!2.45e-13!6;CL:0000212!2.45e-13!6;CL:0000584!2.45e-13!6;CL:0000075!2.72e-11!7;CL:0002076!1.50e-10!15;CL:0000063!3.19e-08!66;CL:0000181!2.07e-07!5;CL:0000417!2.07e-07!5;CL:0000668!2.07e-07!5;CL:0000412!2.07e-07!5;CL:0000182!2.07e-07!5;CL:0000473!3.10e-07!3;CL:0000627!3.10e-07!3;CL:0000682!3.10e-07!3;CL:0002250!3.24e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.76e-48,25;CL:0000223,2.63e-37,20;CL:0002563,1.96e-34,9;CL:0002251,1.96e-34,9;CL:0000239,4.56e-27,6;CL:0000677,4.56e-27,6;CL:0000584,4.56e-27,6;CL:0000075,3.26e-23,7;CL:0002076,1.69e-20,15;CL:0000182,2.28e-20,5;CL:0000682,5.44e-19,3;CL:0002321,8.04e-10,70;CL:0002250,2.63e-09,3;CL:0000473,1.76e-08,7;CL:0000213,1.14e-07,1;CL:0002078,1.14e-07,1;CL:0000115,1.14e-07,1;CL:0002262,1.14e-07,1;CL:1000398,1.14e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.57e-19!9;UBERON:0004808!5.57e-19!9;UBERON:0001277!5.57e-19!9;UBERON:0000344!1.97e-18!15;UBERON:0001242!2.31e-18!13;UBERON:0000060!2.31e-18!13;UBERON:0001262!2.31e-18!13;UBERON:0004786!2.31e-18!13;UBERON:0000485!3.82e-15!11;UBERON:0004923!3.41e-12!24;UBERON:0000490!8.05e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.96e-34,9;UBERON:0004808,1.96e-34,9;UBERON:0001277,1.96e-34,9;UBERON:0000485,4.17e-28,11;UBERON:0001242,1.02e-23,13;UBERON:0001262,1.02e-23,13;UBERON:0004786,1.02e-23,13;UBERON:0000344,1.69e-20,15;UBERON:0003929,7.59e-13,55;UBERON:0004923,1.27e-12,24;UBERON:0000490,1.71e-10,66;UBERON:0005911,5.55e-10,69;UBERON:0000160,1.20e-09,31;UBERON:0002394,1.14e-07,1;UBERON:0001281,1.14e-07,1;UBERON:0000353,1.14e-07,1;UBERON:0003497,1.14e-07,1;UBERON:0003909,1.14e-07,1;UBERON:0003928,1.14e-07,1;UBERON:0003835,1.14e-07,1;UBERON:0003513,1.14e-07,1;UBERON:0001280,1.14e-07,1;UBERON:0004647,1.14e-07,1;UBERON:0002294,1.14e-07,1;UBERON:0001173,1.14e-07,1;UBERON:0004912,1.14e-07,1;UBERON:0005171,1.14e-07,1 | |||
|phase1_expression=0,5.23463111459042,5.0049916332849,5.44435580352294,10.0179145989269,2.18243053485457,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,3.44539178469012,1.7230479846363,1.07735616342945,0,0,0.221730510655305,0,0,0,2.3108129580102,0.831173226792462,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0.860423876981386,8.83962733820076,1.61910957491345,1.94932925234301,0,0,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,5.23463111459042,5.0049916332849,5.44435580352294,10.0179145989269,2.18243053485457,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,3.44539178469012,1.7230479846363,1.07735616342945,0,0,0.221730510655305,0,0,0,2.3108129580102,0.831173226792462,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0.860423876981386,8.83962733820076,1.61910957491345,1.94932925234301,0,0,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:29710433..29710437,- | |||
}} | }} |
Latest revision as of 23:45, 4 August 2015
Short description: | p@chr7:29710433..29710437, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29710433..29710437, - |
Coexpression cluster: | MCL_coexpression_mm9:1341 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.76e-48 | 25 |
endodermal cell | 2.63e-37 | 20 |
intestinal epithelial cell | 1.96e-34 | 9 |
epithelial cell of alimentary canal | 1.96e-34 | 9 |
brush border epithelial cell | 4.56e-27 | 6 |
gut absorptive cell | 4.56e-27 | 6 |
enterocyte | 4.56e-27 | 6 |
columnar/cuboidal epithelial cell | 3.26e-23 | 7 |
endo-epithelial cell | 1.69e-20 | 15 |
hepatocyte | 2.28e-20 | 5 |
M cell of gut | 5.44e-19 | 3 |
embryonic cell | 8.04e-10 | 70 |
intestinal crypt stem cell | 2.63e-09 | 3 |
defensive cell | 1.76e-08 | 7 |
lining cell | 1.14e-07 | 1 |
meso-epithelial cell | 1.14e-07 | 1 |
endothelial cell | 1.14e-07 | 1 |
endothelial cell of sinusoid | 1.14e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.96e-34 | 9 |
gastrointestinal system epithelium | 1.96e-34 | 9 |
intestinal epithelium | 1.96e-34 | 9 |
simple columnar epithelium | 4.17e-28 | 11 |
intestinal mucosa | 1.02e-23 | 13 |
wall of intestine | 1.02e-23 | 13 |
gastrointestinal system mucosa | 1.02e-23 | 13 |
mucosa | 1.69e-20 | 15 |
gut epithelium | 7.59e-13 | 55 |
organ component layer | 1.27e-12 | 24 |
unilaminar epithelium | 1.71e-10 | 66 |
endo-epithelium | 5.55e-10 | 69 |
intestine | 1.20e-09 | 31 |
bile duct | 1.14e-07 | 1 |
hepatic sinusoid | 1.14e-07 | 1 |
parenchyma | 1.14e-07 | 1 |
abdomen blood vessel | 1.14e-07 | 1 |
sinusoid | 1.14e-07 | 1 |
digestive system duct | 1.14e-07 | 1 |
abdominal segment blood vessel | 1.14e-07 | 1 |
trunk blood vessel | 1.14e-07 | 1 |
liver parenchyma | 1.14e-07 | 1 |
liver lobule | 1.14e-07 | 1 |
biliary system | 1.14e-07 | 1 |
biliary tree | 1.14e-07 | 1 |
biliary bud | 1.14e-07 | 1 |
hepatic duct | 1.14e-07 | 1 |