FFCP PHASE2:Mm9::chr13:58009671..58009682,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:20745 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q8BKQ3,uniprot:Q8BM07,uniprot:Q8BM19,uniprot...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=20745 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8BKQ3,Q8BM07,Q8BM19,B2RXY1,Q6DIC9 | ||
|association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end | |association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end | ||
|cluster_id=chr13:58009671..58009682,- | |cluster_id=chr13:58009671..58009682,- |
Latest revision as of 19:29, 1 October 2015
Short description: | p2@Spock1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 10bp_to_NM_001166463, NM_001166464, NM_001166465, NM_001166466, NM_009262, uc007qtc.2, uc007qtd.2, uc007qte.2, uc011zai.1, uc011zaj.1, uc011zak.1_5end |
EntrezGene: | Spock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Spock1 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.91e-22 | 33 |
neuronal stem cell | 6.91e-22 | 33 |
neuroblast | 6.91e-22 | 33 |
electrically signaling cell | 6.91e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.46e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-18 | 23 |
ectodermal cell | 6.24e-17 | 44 |
neurectodermal cell | 6.24e-17 | 44 |
electrically responsive cell | 1.44e-16 | 39 |
electrically active cell | 1.44e-16 | 39 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 2.62e-35 | 75 |
ectoderm-derived structure | 3.26e-34 | 95 |
ectoderm | 3.26e-34 | 95 |
presumptive ectoderm | 3.26e-34 | 95 |
central nervous system | 3.72e-34 | 73 |
neurectoderm | 2.03e-33 | 64 |
neural plate | 2.03e-33 | 64 |
presumptive neural plate | 2.03e-33 | 64 |
ecto-epithelium | 1.25e-29 | 73 |
regional part of nervous system | 6.47e-29 | 54 |
Showing 1 to 10 of 41 entries