FFCP PHASE1:Hg19::chr10:105836165..105836175,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105836165..105836175,- to FFCP PHASE1:Hg19::chr10:105836165..105836175,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105836165..105836175,- | |||
|coexpression_cluster_id=C640 | |||
|description=CAGE_peak_at_chr10:105836165..105836175,- | |||
|id=chr10:105836165..105836175,- | |||
|ontology_enrichment_celltype=CL:0002076!1.92e-31!43;CL:0000223!4.38e-21!59;CL:0002251!1.58e-19!21;CL:0000066!7.23e-19!254;CL:0002368!4.85e-16!13;CL:0000244!1.22e-12!4;CL:0000731!1.22e-12!4;CL:0002159!3.31e-10!13;CL:0000622!5.48e-10!5;CL:0002623!6.14e-10!3;CL:0000076!1.13e-09!62;CL:0002328!1.30e-09!3;CL:0002541!1.46e-09!3;CL:0002621!3.21e-09!3;CL:0000154!2.62e-08!6;CL:0002202!8.55e-08!9;CL:0002632!8.55e-08!9;CL:0002327!5.34e-07!4;CL:0000575!9.08e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.71e-28;4!CL:0000731;3.71e-28;4!CL:0000622;1.18e-22;5!CL:0002623;7.12e-22;3!CL:0002076;9.21e-21;42!CL:0000154;6.38e-19;6!CL:0002251;4.09e-16;20!CL:0000150;1.11e-12;9!CL:0002159;3.26e-12;14!CL:0000240;6.24e-11;6!CL:0000311;6.24e-11;6!CL:0000079;6.24e-11;6!CL:0000237;6.24e-11;6!CL:0002541;1.44e-10;3!CL:0002231;2.14e-10;3!CL:0002328;5.17e-10;3!CL:0002621;5.17e-10;3!CL:0002368;1.51e-08;13!CL:0002336;3.96e-08;1!CL:0002261;3.96e-08;1!CL:0002170;3.96e-08;1!CL:0000362;1.91e-07;9!CL:0002202;2.47e-07;9!CL:0002632;2.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.54e-28,4;CL:0000731,2.54e-28,4;CL:0002076,3.02e-25,42;CL:0000622,1.90e-22,5;CL:0002623,8.83e-22,3;CL:0000154,9.48e-19,6;CL:0000223,1.31e-17,58;CL:0002251,4.40e-16,20;CL:0000150,1.45e-12,9;CL:0002159,3.22e-12,14;CL:0000240,3.87e-11,6;CL:0000311,3.87e-11,6;CL:0000079,3.87e-11,6;CL:0000237,3.87e-11,6;CL:0000036,3.87e-11,6;CL:0000357,3.87e-11,6;CL:0000114,3.87e-11,6;CL:0002541,1.48e-10,3;CL:0002231,1.96e-10,3;CL:0002328,3.12e-10,3;CL:0000066,3.87e-10,253;CL:0002621,5.68e-10,3;CL:0002368,1.23e-08,13;CL:0002336,2.17e-08,1;CL:0002261,2.17e-08,1;CL:0002170,2.17e-08,1;CL:0000362,1.92e-07,9;CL:0002202,2.29e-07,9;CL:0002632,2.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;6.24e-11;6!CL:0000114;6.24e-11;6!CL:0000223;8.48e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!2.76e-24!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.96e-08;1!DOID:3149;3.96e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.16e-08,1;DOID:3149,7.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.70e-22!14;UBERON:0000158!1.70e-22!14;UBERON:0003124!1.96e-14!7;UBERON:0001004!4.29e-14!72;UBERON:0000166!7.36e-14!21;UBERON:0004119!1.26e-12!169;UBERON:0000925!1.26e-12!169;UBERON:0006595!1.26e-12!169;UBERON:0000478!4.72e-12!24;UBERON:0000165!7.48e-12!28;UBERON:0000930!7.48e-12!28;UBERON:0000161!1.04e-10!35;UBERON:0000365!4.27e-10!5;UBERON:0000305!5.97e-10!7;UBERON:0004815!1.30e-09!3;UBERON:0002031!1.30e-09!3;UBERON:0000476!1.46e-09!3;UBERON:0000920!1.46e-09!3;UBERON:0001949!3.21e-09!3;UBERON:0003729!4.00e-09!5;UBERON:0004871!1.18e-08!8;UBERON:0004923!1.34e-08!57;UBERON:0005910!2.14e-08!6;UBERON:0001444!3.21e-08!48;UBERON:0003102!7.75e-08!95;UBERON:0002185!2.74e-07!4;UBERON:0001911!5.34e-07!4;UBERON:0005333!5.34e-07!4;UBERON:0008425!5.34e-07!4;UBERON:0005311!5.34e-07!4;UBERON:0001987!6.41e-07!4;UBERON:0004340!6.41e-07!4;UBERON:0003408!9.15e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.39e-22;5!UBERON:0000486;2.91e-20;12!UBERON:0005910;7.33e-19;6!UBERON:0000161;1.19e-12;19!UBERON:0000166;1.19e-12;19!UBERON:0005631;9.01e-12;10!UBERON:0000158;9.01e-12;10!UBERON:0000165;2.79e-11;28!UBERON:0001044;3.25e-11;6!UBERON:0003293;3.25e-11;6!UBERON:0003294;3.25e-11;6!UBERON:0010047;3.25e-11;6!UBERON:0003408;3.25e-11;6!UBERON:0000167;3.25e-11;6!UBERON:0003124;1.44e-10;3!UBERON:0000920;1.44e-10;3!UBERON:0004815;5.17e-10;3!UBERON:0002031;5.17e-10;3!UBERON:0001949;5.17e-10;3!UBERON:0005911;1.41e-08;36!UBERON:0003729;1.51e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.03e-22,5;UBERON:0005910,5.71e-19,6;UBERON:0003102,1.01e-12,99;UBERON:0000161,3.44e-11,36;UBERON:0001044,3.61e-11,6;UBERON:0003293,3.61e-11,6;UBERON:0003294,3.61e-11,6;UBERON:0010047,3.61e-11,6;UBERON:0000167,3.61e-11,6;UBERON:0000165,7.67e-11,29;UBERON:0000930,7.67e-11,29;UBERON:0000166,9.13e-11,22;UBERON:0000920,1.48e-10,3;UBERON:0004815,3.12e-10,3;UBERON:0002031,3.12e-10,3;UBERON:0001949,5.68e-10,3;UBERON:0004119,4.40e-09,160;UBERON:0000925,4.40e-09,160;UBERON:0006595,4.40e-09,160;UBERON:0000033,1.41e-08,56;UBERON:0003729,1.51e-08,13;UBERON:0005631,2.01e-08,14;UBERON:0000158,2.01e-08,14;UBERON:0001444,7.07e-08,49;UBERON:0000153,1.30e-07,62;UBERON:0007811,1.30e-07,62;UBERON:0001004,1.37e-07,74;UBERON:0003408,6.99e-07,10;UBERON:0005911,8.47e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,1.50602959389125,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63400684980701,0,1.50793458617446,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18376766658517,0.708875486211932,0.895585227028483,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0101294060657,1.47329582297434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0.768760269460425,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,1.29151611801369,3.36942951335251,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.296964680832639,3.07160702099232,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.230850775511391,0,0,0,0,2.55200927785536,0.366390373607449,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.235939446695481,1.10057159113007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07216164163037,4.4386804044427,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,1.50602959389125,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63400684980701,0,1.50793458617446,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18376766658517,0.708875486211932,0.895585227028483,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0101294060657,1.47329582297434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0.768760269460425,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,1.29151611801369,3.36942951335251,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.296964680832639,3.07160702099232,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.230850775511391,0,0,0,0,2.55200927785536,0.366390373607449,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.235939446695481,1.10057159113007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07216164163037,4.4386804044427,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:105836165..105836175,- | |||
}} | }} |
Latest revision as of 10:05, 23 July 2015
Short description: | p@chr10:105836165..105836175, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105836165..105836175, - |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 1.03e-22 | 5 |
transitional epithelium | 5.71e-19 | 6 |
surface structure | 1.01e-12 | 99 |
orifice | 3.44e-11 | 36 |
saliva-secreting gland | 3.61e-11 | 6 |
gland of oral region | 3.61e-11 | 6 |
gland of foregut | 3.61e-11 | 6 |
oral gland | 3.61e-11 | 6 |
oral cavity | 3.61e-11 | 6 |
mouth | 7.67e-11 | 29 |
stomodeum | 7.67e-11 | 29 |
oral opening | 9.13e-11 | 22 |
egg chorion | 1.48e-10 | 3 |
lower respiratory tract epithelium | 3.12e-10 | 3 |
epithelium of bronchus | 3.12e-10 | 3 |
gingival epithelium | 5.68e-10 | 3 |
endoderm-derived structure | 4.40e-09 | 160 |
endoderm | 4.40e-09 | 160 |
presumptive endoderm | 4.40e-09 | 160 |
head | 1.41e-08 | 56 |
mouth mucosa | 1.51e-08 | 13 |
extraembryonic membrane | 2.01e-08 | 14 |
membranous layer | 2.01e-08 | 14 |
subdivision of head | 7.07e-08 | 49 |
anterior region of body | 1.30e-07 | 62 |
craniocervical region | 1.30e-07 | 62 |
respiratory system | 1.37e-07 | 74 |
gland of gut | 6.99e-07 | 10 |
endo-epithelium | 8.47e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.16e-08 | 1 |
keratoacanthoma | 7.16e-08 | 1 |