FFCP PHASE1:Hg19::chr11:113185267..113185278,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:113185267..113185278,+ to FFCP PHASE1:Hg19::chr11:113185267..113185278,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54970 | |EntrezGene=54970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23700 | |HGNC=23700 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8G6,Q53G14,Q9H892 | |UniProt=A8K8G6,Q53G14,Q9H892 | ||
|association_with_transcript=16bp_to_ENST00000529221,NM_017868,uc001pnu.2,uc001pnv.2,uc001pnw.2_5end | |||
|cluster_id=chr11:113185267..113185278,+ | |||
|description=CAGE_peak_2_at_TTC12_5end | |||
|id=chr11:113185267..113185278,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.03e-09!18;CL:0000789!9.03e-09!18;CL:0002420!9.03e-09!18;CL:0002419!9.03e-09!18;CL:0000790!9.03e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-14;18!CL:0000789;1.33e-14;18!CL:0002419;1.33e-14;18!CL:0000084;6.57e-10;25!CL:0000625;1.76e-09;11!CL:0000624;7.85e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.55e-15,18;CL:0000789,5.55e-15,18;CL:0002420,5.55e-15,18;CL:0002419,5.55e-15,18;CL:0000790,5.55e-15,18;CL:0000084,3.60e-10,25;CL:0000827,3.60e-10,25;CL:0000625,1.11e-09,11;CL:0000624,4.75e-08,6;CL:0000838,7.00e-08,52;CL:0000542,1.13e-07,53;CL:0000051,1.13e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.29e-09;3!UBERON:0004054;6.29e-09;3!UBERON:0001829;6.63e-07;2!UBERON:0005904;8.62e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.63e-09,3;UBERON:0004054,2.63e-09,3;UBERON:0005904,4.53e-07,4;UBERON:0001829,6.14e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.37129905888014,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0,0.157421562627358,0.786728553697808,0,0,0,0,0.739508020333575,0.387336002901508,0.142169232487422,0.587200878669695,0,0.401088894940283,0,0.223915474239924,0.647787332037959,0.515151135268373,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0,0,0.48217676009124,0.570025487482497,0,0.730656615058536,0,0,0.889509253863555,1.28019066769952,1.60158394814405,0,1.98313461835459,0,0,0,0.764546456250458,0,0,0.263384084775077,2.360517241366,1.17903228824749,0.822405995998037,1.17030546773475,1.62961133316795,2.8406868344084,1.94826728407911,1.22551502573691,0.589211814949674,1.55073726208535,2.97884250141517,1.0247305578054,0.910415432919148,0.164437904603676,0.276350017785848,2.02862160014537,5.04174314751005,3.21048993707656,4.18142095219907,0.679856056185397,1.91610246800961,3.09264700934367,2.02415753615602,0.637130828648193,1.30216690771284,2.85135613334512,2.71035214339991,3.19966527886046,6.24653632761729,1.89421801635213,0,0.80642697289893,0.534880391567015,0.724122019413995,0,0,0.255725123687061,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0.378139268656271,0,0.351339142772504,1.44076983047484,0,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.417989933073621,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,1.38532057742091,0,0.919463387397059,0.45071417671979,0.226864366320042,0.179389635688862,0,0.635795703478686,0.300091096084402,0.206105058476878,0.257640540045629,0,1.0126579934476,0.0974370051611986,0.252433774244115,0.276149695926898,0.323292113637624,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.871517776369625,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,0,0.579652024875384,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0,0.297262324577456,0,0.335964256397719,0.567100388969546,0.447792613514241,0,0.383382679165211,0.492663237895943,0.176096868026452,0.621984346622316,0.720599767084807,0.25248486685276,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0.36669142910475,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0.985153801009636,1.07813787429759,0.898401253958239,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0.902838299183157,0,0,1.32845119707087,0.553107505625109,0.173767228936166,0.391602314925481,0,0.620304078368662,0.647142602455851,0.640365346820666,0,0,0.907170879989041,0,0.460385919864187,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0,0.532685175939381,0.246381468041427,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.546273504020151,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0,0.721287081534056,0,0.165018999841176,0.574265537996172,1.30012049207304,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0.214840489736547,0.435050081742686,0,0.178064071293475,0.165284915360978,0.576570202095319,1.02090169995667,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,1.08890984861323,0.282431402330337,0.43050537267123,0,0.443430153536676,0,1.01489521846434,0,0,1.19115887728894,2.46817363851717,0,1.08006287447623,1.58625035258854,0.534120355637366,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0.36408156524854,0.222886768554957,0.284136146806413,0.238744484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| ||
|short_description=p2@TTC12 | |||
}} | }} |
Latest revision as of 06:05, 25 September 2015
Short description: | p2@TTC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000529221, NM_017868, uc001pnu.2, uc001pnv.2, uc001pnw.2_5end |
EntrezGene: | TTC12 |
HGNC: | 23700 |
UniProt: | A8K8G6Q53G14Q9H892 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.55e-15 | 18 |
alpha-beta T cell | 5.55e-15 | 18 |
immature T cell | 5.55e-15 | 18 |
mature T cell | 5.55e-15 | 18 |
immature alpha-beta T cell | 5.55e-15 | 18 |
T cell | 3.60e-10 | 25 |
pro-T cell | 3.60e-10 | 25 |
CD8-positive, alpha-beta T cell | 1.11e-09 | 11 |
CD4-positive, alpha-beta T cell | 4.75e-08 | 6 |
lymphoid lineage restricted progenitor cell | 7.00e-08 | 52 |
lymphocyte | 1.13e-07 | 53 |
common lymphoid progenitor | 1.13e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.63e-09 | 3 |
internal male genitalia | 2.63e-09 | 3 |
duct of male reproductive system | 4.53e-07 | 4 |
major salivary gland | 6.14e-07 | 2 |